Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:061:096
Extra
PDB:
ATOM 1 O3' A A 60 47.140 158.388 32.061 1.00 60.87 O
ATOM 2 P G A 61 46.650 158.659 30.560 1.00 64.19 P
ATOM 3 OP1 G A 61 46.149 160.065 30.472 1.00 63.24 O
ATOM 4 OP2 G A 61 45.758 157.527 30.173 1.00 64.36 O
ATOM 5 O5' G A 61 47.999 158.556 29.724 1.00 60.75 O
ATOM 6 C5' G A 61 48.098 159.105 28.410 1.00 57.83 C
ATOM 7 C4' G A 61 49.265 160.051 28.346 1.00 56.83 C
ATOM 8 O4' G A 61 50.369 159.509 29.116 1.00 54.71 O
ATOM 9 C3' G A 61 49.816 160.286 26.951 1.00 57.92 C
ATOM 10 O3' G A 61 49.092 161.316 26.259 1.00 59.32 O
ATOM 11 C2' G A 61 51.276 160.617 27.241 1.00 56.13 C
ATOM 12 O2' G A 61 51.420 161.935 27.733 1.00 57.16 O
ATOM 13 C1' G A 61 51.574 159.649 28.391 1.00 53.66 C
ATOM 14 N9 G A 61 52.015 158.305 28.013 1.00 52.09 N
ATOM 15 C8 G A 61 51.351 157.129 28.270 1.00 51.66 C
ATOM 16 N7 G A 61 51.997 156.073 27.861 1.00 51.11 N
ATOM 17 C5 G A 61 53.155 156.576 27.291 1.00 51.00 C
ATOM 18 C6 G A 61 54.249 155.903 26.688 1.00 51.19 C
ATOM 19 O6 G A 61 54.419 154.683 26.529 1.00 51.02 O
ATOM 20 N1 G A 61 55.211 156.796 26.244 1.00 50.83 N
ATOM 21 C2 G A 61 55.134 158.159 26.354 1.00 51.22 C
ATOM 22 N2 G A 61 56.162 158.850 25.849 1.00 52.15 N
ATOM 23 N3 G A 61 54.124 158.800 26.915 1.00 52.01 N
ATOM 24 C4 G A 61 53.178 157.953 27.362 1.00 51.52 C
ATOM 25 P C A 62 48.591 161.071 24.741 1.00 59.19 P
ATOM 26 OP1 C A 62 47.671 162.182 24.407 1.00 59.38 O
ATOM 27 OP2 C A 62 48.126 159.670 24.572 1.00 58.31 O
ATOM 28 O5' C A 62 49.918 161.235 23.878 1.00 57.37 O
TER
ATOM 1 O3' G B 95 59.403 151.916 15.774 1.00 55.36 O
ATOM 2 P A B 96 60.417 152.450 16.904 1.00 55.90 P
ATOM 3 OP1 A B 96 61.716 152.727 16.243 1.00 54.47 O
ATOM 4 OP2 A B 96 60.369 151.521 18.065 1.00 56.39 O
ATOM 5 O5' A B 96 59.783 153.834 17.369 1.00 52.41 O
ATOM 6 C5' A B 96 59.796 154.964 16.500 1.00 50.89 C
ATOM 7 C4' A B 96 59.485 156.217 17.269 1.00 51.60 C
ATOM 8 O4' A B 96 58.125 156.164 17.757 1.00 52.88 O
ATOM 9 C3' A B 96 60.310 156.458 18.519 1.00 51.18 C
ATOM 10 O3' A B 96 61.573 157.014 18.214 1.00 52.63 O
ATOM 11 C2' A B 96 59.431 157.424 19.294 1.00 51.71 C
ATOM 12 O2' A B 96 59.509 158.749 18.809 1.00 49.67 O
ATOM 13 C1' A B 96 58.044 156.852 18.997 1.00 53.13 C
ATOM 14 N9 A B 96 57.607 155.905 20.019 1.00 54.01 N
ATOM 15 C8 A B 96 57.615 154.530 19.975 1.00 54.96 C
ATOM 16 N7 A B 96 57.150 153.964 21.061 1.00 56.19 N
ATOM 17 C5 A B 96 56.815 155.038 21.877 1.00 55.84 C
ATOM 18 C6 A B 96 56.267 155.111 23.171 1.00 55.40 C
ATOM 19 N6 A B 96 55.937 154.046 23.901 1.00 55.18 N
ATOM 20 N1 A B 96 56.065 156.338 23.694 1.00 55.78 N
ATOM 21 C2 A B 96 56.389 157.412 22.959 1.00 55.97 C
ATOM 22 N3 A B 96 56.904 157.471 21.735 1.00 54.89 N
ATOM 23 C4 A B 96 57.095 156.237 21.245 1.00 54.60 C
ATOM 24 P U B 97 62.851 156.585 19.077 1.00 53.25 P
ATOM 25 OP1 U B 97 64.029 157.218 18.447 1.00 54.80 O
ATOM 26 OP2 U B 97 62.818 155.110 19.227 1.00 54.48 O
ATOM 27 O5' U B 97 62.583 157.271 20.494 1.00 51.79 O
TER
ATOM 2 P G A 61 46.650 158.659 30.560 1.00 64.19 P
ATOM 3 OP1 G A 61 46.149 160.065 30.472 1.00 63.24 O
ATOM 4 OP2 G A 61 45.758 157.527 30.173 1.00 64.36 O
ATOM 5 O5' G A 61 47.999 158.556 29.724 1.00 60.75 O
ATOM 6 C5' G A 61 48.098 159.105 28.410 1.00 57.83 C
ATOM 7 C4' G A 61 49.265 160.051 28.346 1.00 56.83 C
ATOM 8 O4' G A 61 50.369 159.509 29.116 1.00 54.71 O
ATOM 9 C3' G A 61 49.816 160.286 26.951 1.00 57.92 C
ATOM 10 O3' G A 61 49.092 161.316 26.259 1.00 59.32 O
ATOM 11 C2' G A 61 51.276 160.617 27.241 1.00 56.13 C
ATOM 12 O2' G A 61 51.420 161.935 27.733 1.00 57.16 O
ATOM 13 C1' G A 61 51.574 159.649 28.391 1.00 53.66 C
ATOM 14 N9 G A 61 52.015 158.305 28.013 1.00 52.09 N
ATOM 15 C8 G A 61 51.351 157.129 28.270 1.00 51.66 C
ATOM 16 N7 G A 61 51.997 156.073 27.861 1.00 51.11 N
ATOM 17 C5 G A 61 53.155 156.576 27.291 1.00 51.00 C
ATOM 18 C6 G A 61 54.249 155.903 26.688 1.00 51.19 C
ATOM 19 O6 G A 61 54.419 154.683 26.529 1.00 51.02 O
ATOM 20 N1 G A 61 55.211 156.796 26.244 1.00 50.83 N
ATOM 21 C2 G A 61 55.134 158.159 26.354 1.00 51.22 C
ATOM 22 N2 G A 61 56.162 158.850 25.849 1.00 52.15 N
ATOM 23 N3 G A 61 54.124 158.800 26.915 1.00 52.01 N
ATOM 24 C4 G A 61 53.178 157.953 27.362 1.00 51.52 C
ATOM 25 P C A 62 48.591 161.071 24.741 1.00 59.19 P
ATOM 26 OP1 C A 62 47.671 162.182 24.407 1.00 59.38 O
ATOM 27 OP2 C A 62 48.126 159.670 24.572 1.00 58.31 O
ATOM 28 O5' C A 62 49.918 161.235 23.878 1.00 57.37 O
TER
ATOM 1 O3' G B 95 59.403 151.916 15.774 1.00 55.36 O
ATOM 2 P A B 96 60.417 152.450 16.904 1.00 55.90 P
ATOM 3 OP1 A B 96 61.716 152.727 16.243 1.00 54.47 O
ATOM 4 OP2 A B 96 60.369 151.521 18.065 1.00 56.39 O
ATOM 5 O5' A B 96 59.783 153.834 17.369 1.00 52.41 O
ATOM 6 C5' A B 96 59.796 154.964 16.500 1.00 50.89 C
ATOM 7 C4' A B 96 59.485 156.217 17.269 1.00 51.60 C
ATOM 8 O4' A B 96 58.125 156.164 17.757 1.00 52.88 O
ATOM 9 C3' A B 96 60.310 156.458 18.519 1.00 51.18 C
ATOM 10 O3' A B 96 61.573 157.014 18.214 1.00 52.63 O
ATOM 11 C2' A B 96 59.431 157.424 19.294 1.00 51.71 C
ATOM 12 O2' A B 96 59.509 158.749 18.809 1.00 49.67 O
ATOM 13 C1' A B 96 58.044 156.852 18.997 1.00 53.13 C
ATOM 14 N9 A B 96 57.607 155.905 20.019 1.00 54.01 N
ATOM 15 C8 A B 96 57.615 154.530 19.975 1.00 54.96 C
ATOM 16 N7 A B 96 57.150 153.964 21.061 1.00 56.19 N
ATOM 17 C5 A B 96 56.815 155.038 21.877 1.00 55.84 C
ATOM 18 C6 A B 96 56.267 155.111 23.171 1.00 55.40 C
ATOM 19 N6 A B 96 55.937 154.046 23.901 1.00 55.18 N
ATOM 20 N1 A B 96 56.065 156.338 23.694 1.00 55.78 N
ATOM 21 C2 A B 96 56.389 157.412 22.959 1.00 55.97 C
ATOM 22 N3 A B 96 56.904 157.471 21.735 1.00 54.89 N
ATOM 23 C4 A B 96 57.095 156.237 21.245 1.00 54.60 C
ATOM 24 P U B 97 62.851 156.585 19.077 1.00 53.25 P
ATOM 25 OP1 U B 97 64.029 157.218 18.447 1.00 54.80 O
ATOM 26 OP2 U B 97 62.818 155.110 19.227 1.00 54.48 O
ATOM 27 O5' U B 97 62.583 157.271 20.494 1.00 51.79 O
TER
Atoms:
OP1: (46.149,160.065,30.472)
OP2: (45.758,157.527,30.173)
C3': (49.816,160.286,26.951)
C1': (51.574,159.649,28.391)
C5': (48.098,159.105,28.410)
O6: (54.419,154.683,26.529)
O4': (50.369,159.509,29.116)
C8: (51.351,157.129,28.270)
C2: (55.134,158.159,26.354)
C6: (54.249,155.903,26.688)
C5: (53.155,156.576,27.291)
C4: (53.178,157.953,27.362)
P: (46.650,158.659,30.560)
C4': (49.265,160.051,28.346)
C2': (51.276,160.617,27.241)
O2': (51.420,161.935,27.733)
N1: (55.211,156.796,26.244)
N2: (56.162,158.850,25.849)
N3: (54.124,158.800,26.915)
N7: (51.997,156.073,27.861)
N9: (52.015,158.305,28.013)
O5': (47.999,158.556,29.724)
O3': (49.092,161.316,26.259)
OP2: (45.758,157.527,30.173)
C3': (49.816,160.286,26.951)
C1': (51.574,159.649,28.391)
C5': (48.098,159.105,28.410)
O6: (54.419,154.683,26.529)
O4': (50.369,159.509,29.116)
C8: (51.351,157.129,28.270)
C2: (55.134,158.159,26.354)
C6: (54.249,155.903,26.688)
C5: (53.155,156.576,27.291)
C4: (53.178,157.953,27.362)
P: (46.650,158.659,30.560)
C4': (49.265,160.051,28.346)
C2': (51.276,160.617,27.241)
O2': (51.420,161.935,27.733)
N1: (55.211,156.796,26.244)
N2: (56.162,158.850,25.849)
N3: (54.124,158.800,26.915)
N7: (51.997,156.073,27.861)
N9: (52.015,158.305,28.013)
O5': (47.999,158.556,29.724)
O3': (49.092,161.316,26.259)
OP1: (61.716,152.727,16.243)
OP2: (60.369,151.521,18.065)
C3': (60.310,156.458,18.519)
C1': (58.044,156.852,18.997)
C5': (59.796,154.964,16.500)
O4': (58.125,156.164,17.757)
C8: (57.615,154.530,19.975)
O2': (59.509,158.749,18.809)
C6: (56.267,155.111,23.171)
C5: (56.815,155.038,21.877)
C4: (57.095,156.237,21.245)
P: (60.417,152.450,16.904)
C4': (59.485,156.217,17.269)
C2': (59.431,157.424,19.294)
C2: (56.389,157.412,22.959)
N1: (56.065,156.338,23.694)
N3: (56.904,157.471,21.735)
N6: (55.937,154.046,23.901)
N7: (57.150,153.964,21.061)
N9: (57.607,155.905,20.019)
O5': (59.783,153.834,17.369)
O3': (61.573,157.014,18.214)
OP2: (60.369,151.521,18.065)
C3': (60.310,156.458,18.519)
C1': (58.044,156.852,18.997)
C5': (59.796,154.964,16.500)
O4': (58.125,156.164,17.757)
C8: (57.615,154.530,19.975)
O2': (59.509,158.749,18.809)
C6: (56.267,155.111,23.171)
C5: (56.815,155.038,21.877)
C4: (57.095,156.237,21.245)
P: (60.417,152.450,16.904)
C4': (59.485,156.217,17.269)
C2': (59.431,157.424,19.294)
C2: (56.389,157.412,22.959)
N1: (56.065,156.338,23.694)
N3: (56.904,157.471,21.735)
N6: (55.937,154.046,23.901)
N7: (57.150,153.964,21.061)
N9: (57.607,155.905,20.019)
O5': (59.783,153.834,17.369)
O3': (61.573,157.014,18.214)
Image (generated by PyMOL):