Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0X:A39:A90
Extra
PDB:
ATOM 1 O3' A A 38 -12.848 37.783 -9.964 1.00 53.59 O
ATOM 2 P G A 39 -13.159 37.446 -8.433 1.00 55.28 P
ATOM 3 OP1 G A 39 -13.668 36.057 -8.371 1.00 48.33 O
ATOM 4 OP2 G A 39 -13.946 38.560 -7.858 1.00 52.95 O
ATOM 5 O5' G A 39 -11.696 37.464 -7.789 1.00 60.65 O
ATOM 6 C5' G A 39 -10.732 36.515 -8.236 1.00 61.90 C
ATOM 7 C4' G A 39 -9.326 37.078 -8.147 1.00 56.38 C
ATOM 8 O4' G A 39 -9.138 38.082 -9.178 1.00 51.13 O
ATOM 9 C3' G A 39 -8.998 37.739 -6.811 1.00 54.68 C
ATOM 10 O3' G A 39 -7.677 37.406 -6.402 1.00 52.50 O
ATOM 11 C2' G A 39 -9.142 39.221 -7.138 1.00 54.92 C
ATOM 12 O2' G A 39 -8.347 40.055 -6.319 1.00 54.93 O
ATOM 13 C1' G A 39 -8.649 39.259 -8.578 1.00 56.34 C
ATOM 14 N9 G A 39 -9.198 40.403 -9.283 1.00 58.23 N
ATOM 15 C8 G A 39 -10.350 40.450 -10.027 1.00 62.99 C
ATOM 16 N7 G A 39 -10.591 41.629 -10.528 1.00 61.09 N
ATOM 17 C5 G A 39 -9.533 42.409 -10.081 1.00 61.12 C
ATOM 18 C6 G A 39 -9.253 43.775 -10.303 1.00 66.49 C
ATOM 19 O6 G A 39 -9.907 44.593 -10.962 1.00 68.72 O
ATOM 20 N1 G A 39 -8.079 44.167 -9.667 1.00 64.26 N
ATOM 21 C2 G A 39 -7.281 43.340 -8.914 1.00 63.15 C
ATOM 22 N2 G A 39 -6.187 43.897 -8.380 1.00 67.87 N
ATOM 23 N3 G A 39 -7.532 42.058 -8.698 1.00 62.22 N
ATOM 24 C4 G A 39 -8.671 41.668 -9.311 1.00 59.45 C
ATOM 25 P G A 40 -7.402 36.898 -4.910 1.00 54.05 P
ATOM 26 OP1 G A 40 -5.963 36.568 -4.814 1.00 58.18 O
ATOM 27 OP2 G A 40 -8.421 35.885 -4.556 1.00 54.40 O
ATOM 28 O5' G A 40 -7.660 38.208 -4.036 1.00 55.77 O
TER
ATOM 1 O3' U B 89 -2.108 36.502 -9.551 1.00 52.73 O
ATOM 2 P U B 90 -2.952 36.451 -10.908 1.00 49.68 P
ATOM 3 OP1 U B 90 -2.618 35.197 -11.616 1.00 55.33 O
ATOM 4 OP2 U B 90 -2.774 37.737 -11.615 1.00 45.14 O
ATOM 5 O5' U B 90 -4.446 36.315 -10.350 1.00 50.16 O
ATOM 6 C5' U B 90 -5.375 37.391 -10.411 1.00 49.72 C
ATOM 7 C4' U B 90 -6.357 37.197 -11.556 1.00 49.66 C
ATOM 8 O4' U B 90 -7.287 38.308 -11.549 1.00 51.81 O
ATOM 9 C3' U B 90 -5.708 37.148 -12.940 1.00 55.60 C
ATOM 10 O3' U B 90 -5.872 35.870 -13.628 1.00 57.40 O
ATOM 11 C2' U B 90 -6.244 38.365 -13.704 1.00 49.19 C
ATOM 12 O2' U B 90 -6.923 38.032 -14.897 1.00 51.22 O
ATOM 13 C1' U B 90 -7.185 39.076 -12.732 1.00 54.93 C
ATOM 14 N1 U B 90 -6.700 40.455 -12.410 1.00 60.37 N
ATOM 15 C2 U B 90 -7.420 41.557 -12.835 1.00 61.79 C
ATOM 16 O2 U B 90 -8.462 41.488 -13.462 1.00 60.27 O
ATOM 17 N3 U B 90 -6.874 42.769 -12.494 1.00 64.85 N
ATOM 18 C4 U B 90 -5.705 42.992 -11.791 1.00 65.31 C
ATOM 19 O4 U B 90 -5.343 44.143 -11.563 1.00 67.04 O
ATOM 20 C5 U B 90 -5.009 41.798 -11.387 1.00 62.33 C
ATOM 21 C6 U B 90 -5.521 40.604 -11.708 1.00 61.75 C
ATOM 22 P C B 91 -7.264 35.182 -14.038 1.00 53.72 P
ATOM 23 OP1 C B 91 -8.329 35.694 -13.149 1.00 56.95 O
ATOM 24 OP2 C B 91 -7.030 33.727 -14.142 1.00 54.25 O
ATOM 25 O5' C B 91 -7.536 35.729 -15.514 1.00 47.69 O
TER
ATOM 2 P G A 39 -13.159 37.446 -8.433 1.00 55.28 P
ATOM 3 OP1 G A 39 -13.668 36.057 -8.371 1.00 48.33 O
ATOM 4 OP2 G A 39 -13.946 38.560 -7.858 1.00 52.95 O
ATOM 5 O5' G A 39 -11.696 37.464 -7.789 1.00 60.65 O
ATOM 6 C5' G A 39 -10.732 36.515 -8.236 1.00 61.90 C
ATOM 7 C4' G A 39 -9.326 37.078 -8.147 1.00 56.38 C
ATOM 8 O4' G A 39 -9.138 38.082 -9.178 1.00 51.13 O
ATOM 9 C3' G A 39 -8.998 37.739 -6.811 1.00 54.68 C
ATOM 10 O3' G A 39 -7.677 37.406 -6.402 1.00 52.50 O
ATOM 11 C2' G A 39 -9.142 39.221 -7.138 1.00 54.92 C
ATOM 12 O2' G A 39 -8.347 40.055 -6.319 1.00 54.93 O
ATOM 13 C1' G A 39 -8.649 39.259 -8.578 1.00 56.34 C
ATOM 14 N9 G A 39 -9.198 40.403 -9.283 1.00 58.23 N
ATOM 15 C8 G A 39 -10.350 40.450 -10.027 1.00 62.99 C
ATOM 16 N7 G A 39 -10.591 41.629 -10.528 1.00 61.09 N
ATOM 17 C5 G A 39 -9.533 42.409 -10.081 1.00 61.12 C
ATOM 18 C6 G A 39 -9.253 43.775 -10.303 1.00 66.49 C
ATOM 19 O6 G A 39 -9.907 44.593 -10.962 1.00 68.72 O
ATOM 20 N1 G A 39 -8.079 44.167 -9.667 1.00 64.26 N
ATOM 21 C2 G A 39 -7.281 43.340 -8.914 1.00 63.15 C
ATOM 22 N2 G A 39 -6.187 43.897 -8.380 1.00 67.87 N
ATOM 23 N3 G A 39 -7.532 42.058 -8.698 1.00 62.22 N
ATOM 24 C4 G A 39 -8.671 41.668 -9.311 1.00 59.45 C
ATOM 25 P G A 40 -7.402 36.898 -4.910 1.00 54.05 P
ATOM 26 OP1 G A 40 -5.963 36.568 -4.814 1.00 58.18 O
ATOM 27 OP2 G A 40 -8.421 35.885 -4.556 1.00 54.40 O
ATOM 28 O5' G A 40 -7.660 38.208 -4.036 1.00 55.77 O
TER
ATOM 1 O3' U B 89 -2.108 36.502 -9.551 1.00 52.73 O
ATOM 2 P U B 90 -2.952 36.451 -10.908 1.00 49.68 P
ATOM 3 OP1 U B 90 -2.618 35.197 -11.616 1.00 55.33 O
ATOM 4 OP2 U B 90 -2.774 37.737 -11.615 1.00 45.14 O
ATOM 5 O5' U B 90 -4.446 36.315 -10.350 1.00 50.16 O
ATOM 6 C5' U B 90 -5.375 37.391 -10.411 1.00 49.72 C
ATOM 7 C4' U B 90 -6.357 37.197 -11.556 1.00 49.66 C
ATOM 8 O4' U B 90 -7.287 38.308 -11.549 1.00 51.81 O
ATOM 9 C3' U B 90 -5.708 37.148 -12.940 1.00 55.60 C
ATOM 10 O3' U B 90 -5.872 35.870 -13.628 1.00 57.40 O
ATOM 11 C2' U B 90 -6.244 38.365 -13.704 1.00 49.19 C
ATOM 12 O2' U B 90 -6.923 38.032 -14.897 1.00 51.22 O
ATOM 13 C1' U B 90 -7.185 39.076 -12.732 1.00 54.93 C
ATOM 14 N1 U B 90 -6.700 40.455 -12.410 1.00 60.37 N
ATOM 15 C2 U B 90 -7.420 41.557 -12.835 1.00 61.79 C
ATOM 16 O2 U B 90 -8.462 41.488 -13.462 1.00 60.27 O
ATOM 17 N3 U B 90 -6.874 42.769 -12.494 1.00 64.85 N
ATOM 18 C4 U B 90 -5.705 42.992 -11.791 1.00 65.31 C
ATOM 19 O4 U B 90 -5.343 44.143 -11.563 1.00 67.04 O
ATOM 20 C5 U B 90 -5.009 41.798 -11.387 1.00 62.33 C
ATOM 21 C6 U B 90 -5.521 40.604 -11.708 1.00 61.75 C
ATOM 22 P C B 91 -7.264 35.182 -14.038 1.00 53.72 P
ATOM 23 OP1 C B 91 -8.329 35.694 -13.149 1.00 56.95 O
ATOM 24 OP2 C B 91 -7.030 33.727 -14.142 1.00 54.25 O
ATOM 25 O5' C B 91 -7.536 35.729 -15.514 1.00 47.69 O
TER
Atoms:
OP1: (-13.668,36.057,-8.371)
OP2: (-13.946,38.560,-7.858)
C3': (-8.998,37.739,-6.811)
C1': (-8.649,39.259,-8.578)
C5': (-10.732,36.515,-8.236)
O6: (-9.907,44.593,-10.962)
O4': (-9.138,38.082,-9.178)
C8: (-10.350,40.450,-10.027)
C2: (-7.281,43.340,-8.914)
C6: (-9.253,43.775,-10.303)
C5: (-9.533,42.409,-10.081)
C4: (-8.671,41.668,-9.311)
P: (-13.159,37.446,-8.433)
C4': (-9.326,37.078,-8.147)
C2': (-9.142,39.221,-7.138)
O2': (-8.347,40.055,-6.319)
N1: (-8.079,44.167,-9.667)
N2: (-6.187,43.897,-8.380)
N3: (-7.532,42.058,-8.698)
N7: (-10.591,41.629,-10.528)
N9: (-9.198,40.403,-9.283)
O5': (-11.696,37.464,-7.789)
O3': (-7.677,37.406,-6.402)
OP2: (-13.946,38.560,-7.858)
C3': (-8.998,37.739,-6.811)
C1': (-8.649,39.259,-8.578)
C5': (-10.732,36.515,-8.236)
O6: (-9.907,44.593,-10.962)
O4': (-9.138,38.082,-9.178)
C8: (-10.350,40.450,-10.027)
C2: (-7.281,43.340,-8.914)
C6: (-9.253,43.775,-10.303)
C5: (-9.533,42.409,-10.081)
C4: (-8.671,41.668,-9.311)
P: (-13.159,37.446,-8.433)
C4': (-9.326,37.078,-8.147)
C2': (-9.142,39.221,-7.138)
O2': (-8.347,40.055,-6.319)
N1: (-8.079,44.167,-9.667)
N2: (-6.187,43.897,-8.380)
N3: (-7.532,42.058,-8.698)
N7: (-10.591,41.629,-10.528)
N9: (-9.198,40.403,-9.283)
O5': (-11.696,37.464,-7.789)
O3': (-7.677,37.406,-6.402)
C4: (-5.705,42.992,-11.791)
N3: (-6.874,42.769,-12.494)
OP1: (-2.618,35.197,-11.616)
OP2: (-2.774,37.737,-11.615)
C2: (-7.420,41.557,-12.835)
C1': (-7.185,39.076,-12.732)
C3': (-5.708,37.148,-12.940)
O5': (-4.446,36.315,-10.350)
O4': (-7.287,38.308,-11.549)
C5': (-5.375,37.391,-10.411)
P: (-2.952,36.451,-10.908)
C4': (-6.357,37.197,-11.556)
C2': (-6.244,38.365,-13.704)
O2': (-6.923,38.032,-14.897)
N1: (-6.700,40.455,-12.410)
O4: (-5.343,44.143,-11.563)
O2: (-8.462,41.488,-13.462)
C6: (-5.521,40.604,-11.708)
C5: (-5.009,41.798,-11.387)
O3': (-5.872,35.870,-13.628)
N3: (-6.874,42.769,-12.494)
OP1: (-2.618,35.197,-11.616)
OP2: (-2.774,37.737,-11.615)
C2: (-7.420,41.557,-12.835)
C1': (-7.185,39.076,-12.732)
C3': (-5.708,37.148,-12.940)
O5': (-4.446,36.315,-10.350)
O4': (-7.287,38.308,-11.549)
C5': (-5.375,37.391,-10.411)
P: (-2.952,36.451,-10.908)
C4': (-6.357,37.197,-11.556)
C2': (-6.244,38.365,-13.704)
O2': (-6.923,38.032,-14.897)
N1: (-6.700,40.455,-12.410)
O4: (-5.343,44.143,-11.563)
O2: (-8.462,41.488,-13.462)
C6: (-5.521,40.604,-11.708)
C5: (-5.009,41.798,-11.387)
O3': (-5.872,35.870,-13.628)
Image (generated by PyMOL):