Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A53:A51
Extra
PDB:
ATOM 1 O3' C A 52 -16.293 61.937 12.543 1.00 50.23 O
ATOM 2 P G A 53 -14.694 62.102 12.533 1.00 50.41 P
ATOM 3 OP1 G A 53 -14.239 61.986 13.938 1.00 50.34 O
ATOM 4 OP2 G A 53 -14.345 63.319 11.763 1.00 50.39 O
ATOM 5 O5' G A 53 -14.165 60.849 11.684 1.00 49.56 O
ATOM 6 C5' G A 53 -14.501 59.508 12.033 1.00 48.30 C
ATOM 7 C4' G A 53 -14.006 58.519 10.988 1.00 47.41 C
ATOM 8 O4' G A 53 -14.300 58.966 9.634 1.00 47.03 O
ATOM 9 C3' G A 53 -12.502 58.290 10.962 1.00 46.92 C
ATOM 10 O3' G A 53 -12.086 57.435 12.029 1.00 46.71 O
ATOM 11 C2' G A 53 -12.356 57.641 9.589 1.00 46.44 C
ATOM 12 O2' G A 53 -12.788 56.294 9.566 1.00 45.85 O
ATOM 13 C1' G A 53 -13.277 58.528 8.752 1.00 46.21 C
ATOM 14 N9 G A 53 -12.583 59.694 8.194 1.00 45.95 N
ATOM 15 C8 G A 53 -12.746 61.003 8.576 1.00 45.62 C
ATOM 16 N7 G A 53 -11.997 61.842 7.919 1.00 45.74 N
ATOM 17 C5 G A 53 -11.282 61.044 7.039 1.00 45.62 C
ATOM 18 C6 G A 53 -10.308 61.401 6.071 1.00 45.65 C
ATOM 19 O6 G A 53 -9.884 62.535 5.803 1.00 45.74 O
ATOM 20 N1 G A 53 -9.815 60.290 5.380 1.00 45.57 N
ATOM 21 C2 G A 53 -10.220 58.992 5.599 1.00 45.33 C
ATOM 22 N2 G A 53 -9.645 58.046 4.842 1.00 44.93 N
ATOM 23 N3 G A 53 -11.133 58.648 6.504 1.00 45.72 N
ATOM 24 C4 G A 53 -11.626 59.717 7.193 1.00 45.87 C
ATOM 25 P G A 54 -10.741 57.730 12.856 1.00 46.12 P
ATOM 26 OP1 G A 54 -10.646 56.701 13.915 1.00 46.12 O
ATOM 27 OP2 G A 54 -10.701 59.166 13.214 1.00 46.19 O
ATOM 28 O5' G A 54 -9.584 57.466 11.788 1.00 45.97 O
TER
ATOM 1 O3' A B 50 -18.158 56.334 8.007 1.00 43.73 O
ATOM 2 P U B 51 -18.866 57.448 7.088 1.00 44.41 P
ATOM 3 OP1 U B 51 -19.917 58.092 7.911 1.00 44.16 O
ATOM 4 OP2 U B 51 -19.222 56.836 5.786 1.00 43.99 O
ATOM 5 O5' U B 51 -17.683 58.493 6.819 1.00 44.75 O
ATOM 6 C5' U B 51 -17.411 59.516 7.770 1.00 45.63 C
ATOM 7 C4' U B 51 -16.657 60.659 7.123 1.00 46.35 C
ATOM 8 O4' U B 51 -15.419 60.134 6.591 1.00 46.31 O
ATOM 9 C3' U B 51 -17.388 61.361 5.967 1.00 47.12 C
ATOM 10 O3' U B 51 -17.904 62.690 6.276 1.00 48.31 O
ATOM 11 C2' U B 51 -16.406 61.335 4.786 1.00 46.80 C
ATOM 12 O2' U B 51 -16.181 62.610 4.213 1.00 47.08 O
ATOM 13 C1' U B 51 -15.105 60.787 5.377 1.00 46.17 C
ATOM 14 N1 U B 51 -14.388 59.828 4.458 1.00 45.75 N
ATOM 15 C2 U B 51 -13.246 60.252 3.795 1.00 45.35 C
ATOM 16 O2 U B 51 -12.771 61.370 3.908 1.00 45.51 O
ATOM 17 N3 U B 51 -12.666 59.307 2.980 1.00 44.83 N
ATOM 18 C4 U B 51 -13.105 58.012 2.765 1.00 44.71 C
ATOM 19 O4 U B 51 -12.483 57.283 2.002 1.00 44.81 O
ATOM 20 C5 U B 51 -14.298 57.639 3.487 1.00 44.86 C
ATOM 21 C6 U B 51 -14.881 58.541 4.287 1.00 45.21 C
ATOM 22 P C B 52 -17.203 63.806 7.199 1.00 49.84 P
ATOM 23 OP1 C B 52 -17.935 65.070 6.960 1.00 50.14 O
ATOM 24 OP2 C B 52 -15.729 63.776 7.027 1.00 49.52 O
ATOM 25 O5' C B 52 -17.585 63.334 8.677 1.00 49.90 O
TER
ATOM 2 P G A 53 -14.694 62.102 12.533 1.00 50.41 P
ATOM 3 OP1 G A 53 -14.239 61.986 13.938 1.00 50.34 O
ATOM 4 OP2 G A 53 -14.345 63.319 11.763 1.00 50.39 O
ATOM 5 O5' G A 53 -14.165 60.849 11.684 1.00 49.56 O
ATOM 6 C5' G A 53 -14.501 59.508 12.033 1.00 48.30 C
ATOM 7 C4' G A 53 -14.006 58.519 10.988 1.00 47.41 C
ATOM 8 O4' G A 53 -14.300 58.966 9.634 1.00 47.03 O
ATOM 9 C3' G A 53 -12.502 58.290 10.962 1.00 46.92 C
ATOM 10 O3' G A 53 -12.086 57.435 12.029 1.00 46.71 O
ATOM 11 C2' G A 53 -12.356 57.641 9.589 1.00 46.44 C
ATOM 12 O2' G A 53 -12.788 56.294 9.566 1.00 45.85 O
ATOM 13 C1' G A 53 -13.277 58.528 8.752 1.00 46.21 C
ATOM 14 N9 G A 53 -12.583 59.694 8.194 1.00 45.95 N
ATOM 15 C8 G A 53 -12.746 61.003 8.576 1.00 45.62 C
ATOM 16 N7 G A 53 -11.997 61.842 7.919 1.00 45.74 N
ATOM 17 C5 G A 53 -11.282 61.044 7.039 1.00 45.62 C
ATOM 18 C6 G A 53 -10.308 61.401 6.071 1.00 45.65 C
ATOM 19 O6 G A 53 -9.884 62.535 5.803 1.00 45.74 O
ATOM 20 N1 G A 53 -9.815 60.290 5.380 1.00 45.57 N
ATOM 21 C2 G A 53 -10.220 58.992 5.599 1.00 45.33 C
ATOM 22 N2 G A 53 -9.645 58.046 4.842 1.00 44.93 N
ATOM 23 N3 G A 53 -11.133 58.648 6.504 1.00 45.72 N
ATOM 24 C4 G A 53 -11.626 59.717 7.193 1.00 45.87 C
ATOM 25 P G A 54 -10.741 57.730 12.856 1.00 46.12 P
ATOM 26 OP1 G A 54 -10.646 56.701 13.915 1.00 46.12 O
ATOM 27 OP2 G A 54 -10.701 59.166 13.214 1.00 46.19 O
ATOM 28 O5' G A 54 -9.584 57.466 11.788 1.00 45.97 O
TER
ATOM 1 O3' A B 50 -18.158 56.334 8.007 1.00 43.73 O
ATOM 2 P U B 51 -18.866 57.448 7.088 1.00 44.41 P
ATOM 3 OP1 U B 51 -19.917 58.092 7.911 1.00 44.16 O
ATOM 4 OP2 U B 51 -19.222 56.836 5.786 1.00 43.99 O
ATOM 5 O5' U B 51 -17.683 58.493 6.819 1.00 44.75 O
ATOM 6 C5' U B 51 -17.411 59.516 7.770 1.00 45.63 C
ATOM 7 C4' U B 51 -16.657 60.659 7.123 1.00 46.35 C
ATOM 8 O4' U B 51 -15.419 60.134 6.591 1.00 46.31 O
ATOM 9 C3' U B 51 -17.388 61.361 5.967 1.00 47.12 C
ATOM 10 O3' U B 51 -17.904 62.690 6.276 1.00 48.31 O
ATOM 11 C2' U B 51 -16.406 61.335 4.786 1.00 46.80 C
ATOM 12 O2' U B 51 -16.181 62.610 4.213 1.00 47.08 O
ATOM 13 C1' U B 51 -15.105 60.787 5.377 1.00 46.17 C
ATOM 14 N1 U B 51 -14.388 59.828 4.458 1.00 45.75 N
ATOM 15 C2 U B 51 -13.246 60.252 3.795 1.00 45.35 C
ATOM 16 O2 U B 51 -12.771 61.370 3.908 1.00 45.51 O
ATOM 17 N3 U B 51 -12.666 59.307 2.980 1.00 44.83 N
ATOM 18 C4 U B 51 -13.105 58.012 2.765 1.00 44.71 C
ATOM 19 O4 U B 51 -12.483 57.283 2.002 1.00 44.81 O
ATOM 20 C5 U B 51 -14.298 57.639 3.487 1.00 44.86 C
ATOM 21 C6 U B 51 -14.881 58.541 4.287 1.00 45.21 C
ATOM 22 P C B 52 -17.203 63.806 7.199 1.00 49.84 P
ATOM 23 OP1 C B 52 -17.935 65.070 6.960 1.00 50.14 O
ATOM 24 OP2 C B 52 -15.729 63.776 7.027 1.00 49.52 O
ATOM 25 O5' C B 52 -17.585 63.334 8.677 1.00 49.90 O
TER
Atoms:
OP1: (-14.239,61.986,13.938)
OP2: (-14.345,63.319,11.763)
C3': (-12.502,58.290,10.962)
C1': (-13.277,58.528,8.752)
C5': (-14.501,59.508,12.033)
O6: (-9.884,62.535,5.803)
O4': (-14.300,58.966,9.634)
C8: (-12.746,61.003,8.576)
C2: (-10.220,58.992,5.599)
C6: (-10.308,61.401,6.071)
C5: (-11.282,61.044,7.039)
C4: (-11.626,59.717,7.193)
P: (-14.694,62.102,12.533)
C4': (-14.006,58.519,10.988)
C2': (-12.356,57.641,9.589)
O2': (-12.788,56.294,9.566)
N1: (-9.815,60.290,5.380)
N2: (-9.645,58.046,4.842)
N3: (-11.133,58.648,6.504)
N7: (-11.997,61.842,7.919)
N9: (-12.583,59.694,8.194)
O5': (-14.165,60.849,11.684)
O3': (-12.086,57.435,12.029)
OP2: (-14.345,63.319,11.763)
C3': (-12.502,58.290,10.962)
C1': (-13.277,58.528,8.752)
C5': (-14.501,59.508,12.033)
O6: (-9.884,62.535,5.803)
O4': (-14.300,58.966,9.634)
C8: (-12.746,61.003,8.576)
C2: (-10.220,58.992,5.599)
C6: (-10.308,61.401,6.071)
C5: (-11.282,61.044,7.039)
C4: (-11.626,59.717,7.193)
P: (-14.694,62.102,12.533)
C4': (-14.006,58.519,10.988)
C2': (-12.356,57.641,9.589)
O2': (-12.788,56.294,9.566)
N1: (-9.815,60.290,5.380)
N2: (-9.645,58.046,4.842)
N3: (-11.133,58.648,6.504)
N7: (-11.997,61.842,7.919)
N9: (-12.583,59.694,8.194)
O5': (-14.165,60.849,11.684)
O3': (-12.086,57.435,12.029)
C4: (-13.105,58.012,2.765)
N3: (-12.666,59.307,2.980)
OP1: (-19.917,58.092,7.911)
OP2: (-19.222,56.836,5.786)
C2: (-13.246,60.252,3.795)
C1': (-15.105,60.787,5.377)
C3': (-17.388,61.361,5.967)
O5': (-17.683,58.493,6.819)
O4': (-15.419,60.134,6.591)
C5': (-17.411,59.516,7.770)
P: (-18.866,57.448,7.088)
C4': (-16.657,60.659,7.123)
C2': (-16.406,61.335,4.786)
O2': (-16.181,62.610,4.213)
N1: (-14.388,59.828,4.458)
O4: (-12.483,57.283,2.002)
O2: (-12.771,61.370,3.908)
C6: (-14.881,58.541,4.287)
C5: (-14.298,57.639,3.487)
O3': (-17.904,62.690,6.276)
N3: (-12.666,59.307,2.980)
OP1: (-19.917,58.092,7.911)
OP2: (-19.222,56.836,5.786)
C2: (-13.246,60.252,3.795)
C1': (-15.105,60.787,5.377)
C3': (-17.388,61.361,5.967)
O5': (-17.683,58.493,6.819)
O4': (-15.419,60.134,6.591)
C5': (-17.411,59.516,7.770)
P: (-18.866,57.448,7.088)
C4': (-16.657,60.659,7.123)
C2': (-16.406,61.335,4.786)
O2': (-16.181,62.610,4.213)
N1: (-14.388,59.828,4.458)
O4: (-12.483,57.283,2.002)
O2: (-12.771,61.370,3.908)
C6: (-14.881,58.541,4.287)
C5: (-14.298,57.639,3.487)
O3': (-17.904,62.690,6.276)
Image (generated by PyMOL):