Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2H1M:B5:B6
Extra
PDB:
ATOM 1 O3' A A 4 -18.305 38.629 4.489 1.00 25.90 O
ATOM 2 P G A 5 -17.935 37.847 3.150 1.00 26.38 P
ATOM 3 OP1 G A 5 -18.609 38.534 2.033 1.00 26.58 O
ATOM 4 OP2 G A 5 -18.177 36.398 3.349 1.00 26.86 O
ATOM 5 O5' G A 5 -16.359 38.105 3.068 1.00 27.86 O
ATOM 6 C5' G A 5 -15.459 37.026 2.929 1.00 30.45 C
ATOM 7 C4' G A 5 -14.137 37.356 3.580 1.00 32.46 C
ATOM 8 O4' G A 5 -14.157 36.976 4.978 1.00 33.23 O
ATOM 9 C3' G A 5 -12.975 36.557 3.029 1.00 33.77 C
ATOM 10 O3' G A 5 -12.505 37.127 1.826 1.00 35.42 O
ATOM 11 C2' G A 5 -11.964 36.682 4.160 1.00 33.96 C
ATOM 12 O2' G A 5 -11.345 37.954 4.229 1.00 34.10 O
ATOM 13 C1' G A 5 -12.888 36.456 5.351 1.00 34.09 C
ATOM 14 N9 G A 5 -12.990 35.038 5.725 1.00 34.29 N
ATOM 15 C8 G A 5 -11.980 34.263 6.266 1.00 34.39 C
ATOM 16 N7 G A 5 -12.326 33.029 6.506 1.00 34.19 N
ATOM 17 C5 G A 5 -13.655 32.978 6.100 1.00 34.19 C
ATOM 18 C6 G A 5 -14.570 31.898 6.118 1.00 34.19 C
ATOM 19 O6 G A 5 -14.373 30.746 6.510 1.00 34.20 O
ATOM 20 N1 G A 5 -15.826 32.247 5.619 1.00 34.44 N
ATOM 21 C2 G A 5 -16.161 33.502 5.155 1.00 34.47 C
ATOM 22 N2 G A 5 -17.421 33.660 4.708 1.00 34.35 N
ATOM 23 N3 G A 5 -15.310 34.525 5.133 1.00 34.21 N
ATOM 24 C4 G A 5 -14.080 34.200 5.615 1.00 34.13 C
ATOM 25 P U A 6 -12.323 36.191 0.542 1.00 36.66 P
ATOM 26 OP1 U A 6 -11.807 37.048 -0.550 1.00 36.53 O
ATOM 27 OP2 U A 6 -13.588 35.444 0.349 1.00 36.39 O
ATOM 28 O5' U A 6 -11.193 35.141 0.989 1.00 37.54 O
TER
ATOM 1 O3' G B 5 -12.505 37.127 1.826 1.00 35.42 O
ATOM 2 P U B 6 -12.323 36.191 0.542 1.00 36.66 P
ATOM 3 OP1 U B 6 -11.807 37.048 -0.550 1.00 36.53 O
ATOM 4 OP2 U B 6 -13.588 35.444 0.349 1.00 36.39 O
ATOM 5 O5' U B 6 -11.193 35.141 0.989 1.00 37.54 O
ATOM 6 C5' U B 6 -9.862 35.560 1.314 1.00 39.08 C
ATOM 7 C4' U B 6 -9.061 34.437 1.955 1.00 40.40 C
ATOM 8 O4' U B 6 -9.673 33.993 3.197 1.00 40.61 O
ATOM 9 C3' U B 6 -8.973 33.157 1.139 1.00 41.12 C
ATOM 10 O3' U B 6 -8.010 33.270 0.111 1.00 42.52 O
ATOM 11 C2' U B 6 -8.576 32.151 2.210 1.00 40.94 C
ATOM 12 O2' U B 6 -7.225 32.268 2.615 1.00 40.76 O
ATOM 13 C1' U B 6 -9.520 32.585 3.330 1.00 40.80 C
ATOM 14 N1 U B 6 -10.868 31.882 3.294 1.00 40.85 N
ATOM 15 C2 U B 6 -10.963 30.546 3.665 1.00 40.88 C
ATOM 16 O2 U B 6 -10.018 29.868 4.028 1.00 41.06 O
ATOM 17 N3 U B 6 -12.227 30.005 3.596 1.00 40.75 N
ATOM 18 C4 U B 6 -13.390 30.644 3.203 1.00 40.80 C
ATOM 19 O4 U B 6 -14.449 30.026 3.194 1.00 40.85 O
ATOM 20 C5 U B 6 -13.224 32.026 2.830 1.00 40.92 C
ATOM 21 C6 U B 6 -12.001 32.575 2.891 1.00 40.97 C
ATOM 22 P U B 7 -8.356 32.683 -1.339 1.00 43.57 P
ATOM 23 OP1 U B 7 -7.390 33.269 -2.293 1.00 43.62 O
ATOM 24 OP2 U B 7 -9.807 32.835 -1.591 1.00 43.61 O
ATOM 25 O5' U B 7 -8.063 31.119 -1.167 1.00 44.27 O
TER
ATOM 2 P G A 5 -17.935 37.847 3.150 1.00 26.38 P
ATOM 3 OP1 G A 5 -18.609 38.534 2.033 1.00 26.58 O
ATOM 4 OP2 G A 5 -18.177 36.398 3.349 1.00 26.86 O
ATOM 5 O5' G A 5 -16.359 38.105 3.068 1.00 27.86 O
ATOM 6 C5' G A 5 -15.459 37.026 2.929 1.00 30.45 C
ATOM 7 C4' G A 5 -14.137 37.356 3.580 1.00 32.46 C
ATOM 8 O4' G A 5 -14.157 36.976 4.978 1.00 33.23 O
ATOM 9 C3' G A 5 -12.975 36.557 3.029 1.00 33.77 C
ATOM 10 O3' G A 5 -12.505 37.127 1.826 1.00 35.42 O
ATOM 11 C2' G A 5 -11.964 36.682 4.160 1.00 33.96 C
ATOM 12 O2' G A 5 -11.345 37.954 4.229 1.00 34.10 O
ATOM 13 C1' G A 5 -12.888 36.456 5.351 1.00 34.09 C
ATOM 14 N9 G A 5 -12.990 35.038 5.725 1.00 34.29 N
ATOM 15 C8 G A 5 -11.980 34.263 6.266 1.00 34.39 C
ATOM 16 N7 G A 5 -12.326 33.029 6.506 1.00 34.19 N
ATOM 17 C5 G A 5 -13.655 32.978 6.100 1.00 34.19 C
ATOM 18 C6 G A 5 -14.570 31.898 6.118 1.00 34.19 C
ATOM 19 O6 G A 5 -14.373 30.746 6.510 1.00 34.20 O
ATOM 20 N1 G A 5 -15.826 32.247 5.619 1.00 34.44 N
ATOM 21 C2 G A 5 -16.161 33.502 5.155 1.00 34.47 C
ATOM 22 N2 G A 5 -17.421 33.660 4.708 1.00 34.35 N
ATOM 23 N3 G A 5 -15.310 34.525 5.133 1.00 34.21 N
ATOM 24 C4 G A 5 -14.080 34.200 5.615 1.00 34.13 C
ATOM 25 P U A 6 -12.323 36.191 0.542 1.00 36.66 P
ATOM 26 OP1 U A 6 -11.807 37.048 -0.550 1.00 36.53 O
ATOM 27 OP2 U A 6 -13.588 35.444 0.349 1.00 36.39 O
ATOM 28 O5' U A 6 -11.193 35.141 0.989 1.00 37.54 O
TER
ATOM 1 O3' G B 5 -12.505 37.127 1.826 1.00 35.42 O
ATOM 2 P U B 6 -12.323 36.191 0.542 1.00 36.66 P
ATOM 3 OP1 U B 6 -11.807 37.048 -0.550 1.00 36.53 O
ATOM 4 OP2 U B 6 -13.588 35.444 0.349 1.00 36.39 O
ATOM 5 O5' U B 6 -11.193 35.141 0.989 1.00 37.54 O
ATOM 6 C5' U B 6 -9.862 35.560 1.314 1.00 39.08 C
ATOM 7 C4' U B 6 -9.061 34.437 1.955 1.00 40.40 C
ATOM 8 O4' U B 6 -9.673 33.993 3.197 1.00 40.61 O
ATOM 9 C3' U B 6 -8.973 33.157 1.139 1.00 41.12 C
ATOM 10 O3' U B 6 -8.010 33.270 0.111 1.00 42.52 O
ATOM 11 C2' U B 6 -8.576 32.151 2.210 1.00 40.94 C
ATOM 12 O2' U B 6 -7.225 32.268 2.615 1.00 40.76 O
ATOM 13 C1' U B 6 -9.520 32.585 3.330 1.00 40.80 C
ATOM 14 N1 U B 6 -10.868 31.882 3.294 1.00 40.85 N
ATOM 15 C2 U B 6 -10.963 30.546 3.665 1.00 40.88 C
ATOM 16 O2 U B 6 -10.018 29.868 4.028 1.00 41.06 O
ATOM 17 N3 U B 6 -12.227 30.005 3.596 1.00 40.75 N
ATOM 18 C4 U B 6 -13.390 30.644 3.203 1.00 40.80 C
ATOM 19 O4 U B 6 -14.449 30.026 3.194 1.00 40.85 O
ATOM 20 C5 U B 6 -13.224 32.026 2.830 1.00 40.92 C
ATOM 21 C6 U B 6 -12.001 32.575 2.891 1.00 40.97 C
ATOM 22 P U B 7 -8.356 32.683 -1.339 1.00 43.57 P
ATOM 23 OP1 U B 7 -7.390 33.269 -2.293 1.00 43.62 O
ATOM 24 OP2 U B 7 -9.807 32.835 -1.591 1.00 43.61 O
ATOM 25 O5' U B 7 -8.063 31.119 -1.167 1.00 44.27 O
TER
Atoms:
OP1: (-18.609,38.534,2.033)
OP2: (-18.177,36.398,3.349)
C3': (-12.975,36.557,3.029)
C1': (-12.888,36.456,5.351)
C5': (-15.459,37.026,2.929)
O6: (-14.373,30.746,6.510)
O4': (-14.157,36.976,4.978)
C8: (-11.980,34.263,6.266)
C2: (-16.161,33.502,5.155)
C6: (-14.570,31.898,6.118)
C5: (-13.655,32.978,6.100)
C4: (-14.080,34.200,5.615)
P: (-17.935,37.847,3.150)
C4': (-14.137,37.356,3.580)
C2': (-11.964,36.682,4.160)
O2': (-11.345,37.954,4.229)
N1: (-15.826,32.247,5.619)
N2: (-17.421,33.660,4.708)
N3: (-15.310,34.525,5.133)
N7: (-12.326,33.029,6.506)
N9: (-12.990,35.038,5.725)
O5': (-16.359,38.105,3.068)
O3': (-12.505,37.127,1.826)
OP2: (-18.177,36.398,3.349)
C3': (-12.975,36.557,3.029)
C1': (-12.888,36.456,5.351)
C5': (-15.459,37.026,2.929)
O6: (-14.373,30.746,6.510)
O4': (-14.157,36.976,4.978)
C8: (-11.980,34.263,6.266)
C2: (-16.161,33.502,5.155)
C6: (-14.570,31.898,6.118)
C5: (-13.655,32.978,6.100)
C4: (-14.080,34.200,5.615)
P: (-17.935,37.847,3.150)
C4': (-14.137,37.356,3.580)
C2': (-11.964,36.682,4.160)
O2': (-11.345,37.954,4.229)
N1: (-15.826,32.247,5.619)
N2: (-17.421,33.660,4.708)
N3: (-15.310,34.525,5.133)
N7: (-12.326,33.029,6.506)
N9: (-12.990,35.038,5.725)
O5': (-16.359,38.105,3.068)
O3': (-12.505,37.127,1.826)
C4: (-13.390,30.644,3.203)
N3: (-12.227,30.005,3.596)
OP1: (-11.807,37.048,-0.550)
OP2: (-13.588,35.444,0.349)
C2: (-10.963,30.546,3.665)
C1': (-9.520,32.585,3.330)
C3': (-8.973,33.157,1.139)
O5': (-11.193,35.141,0.989)
O4': (-9.673,33.993,3.197)
C5': (-9.862,35.560,1.314)
P: (-12.323,36.191,0.542)
C4': (-9.061,34.437,1.955)
C2': (-8.576,32.151,2.210)
O2': (-7.225,32.268,2.615)
N1: (-10.868,31.882,3.294)
O4: (-14.449,30.026,3.194)
O2: (-10.018,29.868,4.028)
C6: (-12.001,32.575,2.891)
C5: (-13.224,32.026,2.830)
O3': (-8.010,33.270,0.111)
N3: (-12.227,30.005,3.596)
OP1: (-11.807,37.048,-0.550)
OP2: (-13.588,35.444,0.349)
C2: (-10.963,30.546,3.665)
C1': (-9.520,32.585,3.330)
C3': (-8.973,33.157,1.139)
O5': (-11.193,35.141,0.989)
O4': (-9.673,33.993,3.197)
C5': (-9.862,35.560,1.314)
P: (-12.323,36.191,0.542)
C4': (-9.061,34.437,1.955)
C2': (-8.576,32.151,2.210)
O2': (-7.225,32.268,2.615)
N1: (-10.868,31.882,3.294)
O4: (-14.449,30.026,3.194)
O2: (-10.018,29.868,4.028)
C6: (-12.001,32.575,2.891)
C5: (-13.224,32.026,2.830)
O3': (-8.010,33.270,0.111)
Image (generated by PyMOL):