Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIQ:A42:A93
Extra
PDB:
ATOM 1 O3' A A 41 -1.447 52.164 6.661 1.00 30.92 O
ATOM 2 P G A 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 3 OP1 G A 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 4 OP2 G A 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 5 O5' G A 42 0.661 50.836 6.902 1.00 29.89 O
ATOM 6 C5' G A 42 0.889 51.049 8.299 1.00 29.07 C
ATOM 7 C4' G A 42 1.125 49.739 9.046 1.00 28.55 C
ATOM 8 O4' G A 42 -0.016 48.858 8.875 1.00 28.60 O
ATOM 9 C3' G A 42 2.344 48.924 8.616 1.00 28.20 C
ATOM 10 O3' G A 42 2.913 48.234 9.741 1.00 28.39 O
ATOM 11 C2' G A 42 1.745 47.969 7.585 1.00 27.68 C
ATOM 12 O2' G A 42 2.440 46.747 7.471 1.00 27.76 O
ATOM 13 C1' G A 42 0.346 47.708 8.130 1.00 27.86 C
ATOM 14 N9 G A 42 -0.588 47.514 7.027 1.00 27.91 N
ATOM 15 C8 G A 42 -1.432 48.443 6.468 1.00 27.65 C
ATOM 16 N7 G A 42 -2.138 47.981 5.476 1.00 27.74 N
ATOM 17 C5 G A 42 -1.730 46.660 5.362 1.00 27.82 C
ATOM 18 C6 G A 42 -2.140 45.654 4.454 1.00 27.78 C
ATOM 19 O6 G A 42 -2.980 45.745 3.546 1.00 27.15 O
ATOM 20 N1 G A 42 -1.470 44.445 4.682 1.00 28.06 N
ATOM 21 C2 G A 42 -0.524 44.236 5.665 1.00 27.83 C
ATOM 22 N2 G A 42 0.014 43.012 5.743 1.00 27.53 N
ATOM 23 N3 G A 42 -0.132 45.175 6.515 1.00 28.00 N
ATOM 24 C4 G A 42 -0.775 46.356 6.310 1.00 27.89 C
ATOM 25 P G A 43 4.500 48.099 9.938 1.00 28.51 P
ATOM 26 OP1 G A 43 4.765 46.840 10.663 1.00 28.38 O
ATOM 27 OP2 G A 43 5.001 49.375 10.494 1.00 29.00 O
ATOM 28 O5' G A 43 5.041 47.917 8.444 1.00 28.55 O
TER
ATOM 1 O3' U B 92 0.450 43.966 13.918 1.00 22.62 O
ATOM 2 P U B 93 -1.045 44.518 13.789 1.00 23.04 P
ATOM 3 OP1 U B 93 -1.240 45.439 14.929 1.00 23.19 O
ATOM 4 OP2 U B 93 -1.986 43.391 13.591 1.00 22.92 O
ATOM 5 O5' U B 93 -0.993 45.298 12.391 1.00 23.50 O
ATOM 6 C5' U B 93 -0.673 46.684 12.309 1.00 24.39 C
ATOM 7 C4' U B 93 -1.738 47.438 11.523 1.00 24.93 C
ATOM 8 O4' U B 93 -1.887 46.869 10.197 1.00 24.86 O
ATOM 9 C3' U B 93 -3.128 47.446 12.149 1.00 25.21 C
ATOM 10 O3' U B 93 -3.597 48.782 12.159 1.00 25.98 O
ATOM 11 C2' U B 93 -3.956 46.530 11.242 1.00 25.26 C
ATOM 12 O2' U B 93 -5.318 46.889 11.100 1.00 25.63 O
ATOM 13 C1' U B 93 -3.248 46.651 9.902 1.00 24.92 C
ATOM 14 N1 U B 93 -3.393 45.407 9.084 1.00 25.24 N
ATOM 15 C2 U B 93 -4.204 45.422 7.959 1.00 25.52 C
ATOM 16 O2 U B 93 -4.814 46.410 7.582 1.00 26.00 O
ATOM 17 N3 U B 93 -4.276 44.223 7.280 1.00 24.89 N
ATOM 18 C4 U B 93 -3.635 43.044 7.614 1.00 24.47 C
ATOM 19 O4 U B 93 -3.794 42.054 6.919 1.00 24.75 O
ATOM 20 C5 U B 93 -2.812 43.101 8.794 1.00 24.77 C
ATOM 21 C6 U B 93 -2.725 44.254 9.470 1.00 25.04 C
ATOM 22 P C B 94 -4.470 49.332 13.379 1.00 27.01 P
ATOM 23 OP1 C B 94 -4.386 50.810 13.344 1.00 26.48 O
ATOM 24 OP2 C B 94 -4.102 48.585 14.609 1.00 26.94 O
ATOM 25 O5' C B 94 -5.951 48.889 12.970 1.00 26.85 O
TER
ATOM 2 P G A 42 -0.006 51.972 5.994 1.00 30.17 P
ATOM 3 OP1 G A 42 0.770 53.219 6.178 1.00 30.29 O
ATOM 4 OP2 G A 42 -0.222 51.426 4.636 1.00 30.25 O
ATOM 5 O5' G A 42 0.661 50.836 6.902 1.00 29.89 O
ATOM 6 C5' G A 42 0.889 51.049 8.299 1.00 29.07 C
ATOM 7 C4' G A 42 1.125 49.739 9.046 1.00 28.55 C
ATOM 8 O4' G A 42 -0.016 48.858 8.875 1.00 28.60 O
ATOM 9 C3' G A 42 2.344 48.924 8.616 1.00 28.20 C
ATOM 10 O3' G A 42 2.913 48.234 9.741 1.00 28.39 O
ATOM 11 C2' G A 42 1.745 47.969 7.585 1.00 27.68 C
ATOM 12 O2' G A 42 2.440 46.747 7.471 1.00 27.76 O
ATOM 13 C1' G A 42 0.346 47.708 8.130 1.00 27.86 C
ATOM 14 N9 G A 42 -0.588 47.514 7.027 1.00 27.91 N
ATOM 15 C8 G A 42 -1.432 48.443 6.468 1.00 27.65 C
ATOM 16 N7 G A 42 -2.138 47.981 5.476 1.00 27.74 N
ATOM 17 C5 G A 42 -1.730 46.660 5.362 1.00 27.82 C
ATOM 18 C6 G A 42 -2.140 45.654 4.454 1.00 27.78 C
ATOM 19 O6 G A 42 -2.980 45.745 3.546 1.00 27.15 O
ATOM 20 N1 G A 42 -1.470 44.445 4.682 1.00 28.06 N
ATOM 21 C2 G A 42 -0.524 44.236 5.665 1.00 27.83 C
ATOM 22 N2 G A 42 0.014 43.012 5.743 1.00 27.53 N
ATOM 23 N3 G A 42 -0.132 45.175 6.515 1.00 28.00 N
ATOM 24 C4 G A 42 -0.775 46.356 6.310 1.00 27.89 C
ATOM 25 P G A 43 4.500 48.099 9.938 1.00 28.51 P
ATOM 26 OP1 G A 43 4.765 46.840 10.663 1.00 28.38 O
ATOM 27 OP2 G A 43 5.001 49.375 10.494 1.00 29.00 O
ATOM 28 O5' G A 43 5.041 47.917 8.444 1.00 28.55 O
TER
ATOM 1 O3' U B 92 0.450 43.966 13.918 1.00 22.62 O
ATOM 2 P U B 93 -1.045 44.518 13.789 1.00 23.04 P
ATOM 3 OP1 U B 93 -1.240 45.439 14.929 1.00 23.19 O
ATOM 4 OP2 U B 93 -1.986 43.391 13.591 1.00 22.92 O
ATOM 5 O5' U B 93 -0.993 45.298 12.391 1.00 23.50 O
ATOM 6 C5' U B 93 -0.673 46.684 12.309 1.00 24.39 C
ATOM 7 C4' U B 93 -1.738 47.438 11.523 1.00 24.93 C
ATOM 8 O4' U B 93 -1.887 46.869 10.197 1.00 24.86 O
ATOM 9 C3' U B 93 -3.128 47.446 12.149 1.00 25.21 C
ATOM 10 O3' U B 93 -3.597 48.782 12.159 1.00 25.98 O
ATOM 11 C2' U B 93 -3.956 46.530 11.242 1.00 25.26 C
ATOM 12 O2' U B 93 -5.318 46.889 11.100 1.00 25.63 O
ATOM 13 C1' U B 93 -3.248 46.651 9.902 1.00 24.92 C
ATOM 14 N1 U B 93 -3.393 45.407 9.084 1.00 25.24 N
ATOM 15 C2 U B 93 -4.204 45.422 7.959 1.00 25.52 C
ATOM 16 O2 U B 93 -4.814 46.410 7.582 1.00 26.00 O
ATOM 17 N3 U B 93 -4.276 44.223 7.280 1.00 24.89 N
ATOM 18 C4 U B 93 -3.635 43.044 7.614 1.00 24.47 C
ATOM 19 O4 U B 93 -3.794 42.054 6.919 1.00 24.75 O
ATOM 20 C5 U B 93 -2.812 43.101 8.794 1.00 24.77 C
ATOM 21 C6 U B 93 -2.725 44.254 9.470 1.00 25.04 C
ATOM 22 P C B 94 -4.470 49.332 13.379 1.00 27.01 P
ATOM 23 OP1 C B 94 -4.386 50.810 13.344 1.00 26.48 O
ATOM 24 OP2 C B 94 -4.102 48.585 14.609 1.00 26.94 O
ATOM 25 O5' C B 94 -5.951 48.889 12.970 1.00 26.85 O
TER
Atoms:
OP1: (0.770,53.219,6.178)
OP2: (-0.222,51.426,4.636)
C3': (2.344,48.924,8.616)
C1': (0.346,47.708,8.130)
C5': (0.889,51.049,8.299)
O6: (-2.980,45.745,3.546)
O4': (-0.016,48.858,8.875)
C8: (-1.432,48.443,6.468)
C2: (-0.524,44.236,5.665)
C6: (-2.140,45.654,4.454)
C5: (-1.730,46.660,5.362)
C4: (-0.775,46.356,6.310)
P: (-0.006,51.972,5.994)
C4': (1.125,49.739,9.046)
C2': (1.745,47.969,7.585)
O2': (2.440,46.747,7.471)
N1: (-1.470,44.445,4.682)
N2: (0.014,43.012,5.743)
N3: (-0.132,45.175,6.515)
N7: (-2.138,47.981,5.476)
N9: (-0.588,47.514,7.027)
O5': (0.661,50.836,6.902)
O3': (2.913,48.234,9.741)
OP2: (-0.222,51.426,4.636)
C3': (2.344,48.924,8.616)
C1': (0.346,47.708,8.130)
C5': (0.889,51.049,8.299)
O6: (-2.980,45.745,3.546)
O4': (-0.016,48.858,8.875)
C8: (-1.432,48.443,6.468)
C2: (-0.524,44.236,5.665)
C6: (-2.140,45.654,4.454)
C5: (-1.730,46.660,5.362)
C4: (-0.775,46.356,6.310)
P: (-0.006,51.972,5.994)
C4': (1.125,49.739,9.046)
C2': (1.745,47.969,7.585)
O2': (2.440,46.747,7.471)
N1: (-1.470,44.445,4.682)
N2: (0.014,43.012,5.743)
N3: (-0.132,45.175,6.515)
N7: (-2.138,47.981,5.476)
N9: (-0.588,47.514,7.027)
O5': (0.661,50.836,6.902)
O3': (2.913,48.234,9.741)
C4: (-3.635,43.044,7.614)
N3: (-4.276,44.223,7.280)
OP1: (-1.240,45.439,14.929)
OP2: (-1.986,43.391,13.591)
C2: (-4.204,45.422,7.959)
C1': (-3.248,46.651,9.902)
C3': (-3.128,47.446,12.149)
O5': (-0.993,45.298,12.391)
O4': (-1.887,46.869,10.197)
C5': (-0.673,46.684,12.309)
P: (-1.045,44.518,13.789)
C4': (-1.738,47.438,11.523)
C2': (-3.956,46.530,11.242)
O2': (-5.318,46.889,11.100)
N1: (-3.393,45.407,9.084)
O4: (-3.794,42.054,6.919)
O2: (-4.814,46.410,7.582)
C6: (-2.725,44.254,9.470)
C5: (-2.812,43.101,8.794)
O3': (-3.597,48.782,12.159)
N3: (-4.276,44.223,7.280)
OP1: (-1.240,45.439,14.929)
OP2: (-1.986,43.391,13.591)
C2: (-4.204,45.422,7.959)
C1': (-3.248,46.651,9.902)
C3': (-3.128,47.446,12.149)
O5': (-0.993,45.298,12.391)
O4': (-1.887,46.869,10.197)
C5': (-0.673,46.684,12.309)
P: (-1.045,44.518,13.789)
C4': (-1.738,47.438,11.523)
C2': (-3.956,46.530,11.242)
O2': (-5.318,46.889,11.100)
N1: (-3.393,45.407,9.084)
O4: (-3.794,42.054,6.919)
O2: (-4.814,46.410,7.582)
C6: (-2.725,44.254,9.470)
C5: (-2.812,43.101,8.794)
O3': (-3.597,48.782,12.159)
Image (generated by PyMOL):