Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A50:A48
Extra
PDB:
ATOM 1 O3' C A 49 -19.442 30.232 -25.620 1.00 85.63 O
ATOM 2 P G A 50 -19.592 29.993 -24.045 1.00 85.65 P
ATOM 3 OP1 G A 50 -18.953 28.697 -23.721 1.00 87.23 O
ATOM 4 OP2 G A 50 -21.013 30.225 -23.682 1.00 79.37 O
ATOM 5 O5' G A 50 -18.653 31.128 -23.414 1.00 70.85 O
ATOM 6 C5' G A 50 -18.115 32.176 -24.210 1.00 64.55 C
ATOM 7 C4' G A 50 -17.748 33.370 -23.349 1.00 57.56 C
ATOM 8 O4' G A 50 -18.914 34.215 -23.195 1.00 56.91 O
ATOM 9 C3' G A 50 -17.334 33.065 -21.915 1.00 54.98 C
ATOM 10 O3' G A 50 -15.962 32.707 -21.814 1.00 53.38 O
ATOM 11 C2' G A 50 -17.580 34.414 -21.258 1.00 52.30 C
ATOM 12 O2' G A 50 -16.570 35.344 -21.585 1.00 51.71 O
ATOM 13 C1' G A 50 -18.894 34.820 -21.914 1.00 52.56 C
ATOM 14 N9 G A 50 -20.059 34.368 -21.161 1.00 50.33 N
ATOM 15 C8 G A 50 -20.912 33.347 -21.494 1.00 51.45 C
ATOM 16 N7 G A 50 -21.867 33.164 -20.627 1.00 49.42 N
ATOM 17 C5 G A 50 -21.628 34.123 -19.655 1.00 46.25 C
ATOM 18 C6 G A 50 -22.337 34.403 -18.466 1.00 45.71 C
ATOM 19 O6 G A 50 -23.351 33.838 -18.033 1.00 45.45 O
ATOM 20 N1 G A 50 -21.763 35.457 -17.757 1.00 44.25 N
ATOM 21 C2 G A 50 -20.646 36.150 -18.154 1.00 45.28 C
ATOM 22 N2 G A 50 -20.238 37.135 -17.340 1.00 45.35 N
ATOM 23 N3 G A 50 -19.973 35.894 -19.268 1.00 46.79 N
ATOM 24 C4 G A 50 -20.519 34.872 -19.967 1.00 47.28 C
ATOM 25 P G A 51 -15.517 31.650 -20.695 1.00 53.92 P
ATOM 26 OP1 G A 51 -14.054 31.470 -20.814 1.00 51.21 O
ATOM 27 OP2 G A 51 -16.414 30.477 -20.793 1.00 52.75 O
ATOM 28 O5' G A 51 -15.813 32.389 -19.310 1.00 47.84 O
TER
ATOM 1 O3' A B 47 -18.384 37.686 -26.573 1.00 62.51 O
ATOM 2 P U B 48 -19.861 37.953 -27.146 1.00 66.38 P
ATOM 3 OP1 U B 48 -19.822 37.786 -28.617 1.00 66.59 O
ATOM 4 OP2 U B 48 -20.374 39.213 -26.558 1.00 60.72 O
ATOM 5 O5' U B 48 -20.682 36.746 -26.504 1.00 58.52 O
ATOM 6 C5' U B 48 -20.624 36.618 -25.106 1.00 57.20 C
ATOM 7 C4' U B 48 -21.392 35.411 -24.628 1.00 58.66 C
ATOM 8 O4' U B 48 -21.459 35.523 -23.189 1.00 55.89 O
ATOM 9 C3' U B 48 -22.846 35.333 -25.055 1.00 59.15 C
ATOM 10 O3' U B 48 -23.324 34.027 -24.776 1.00 66.98 O
ATOM 11 C2' U B 48 -23.475 36.346 -24.107 1.00 54.83 C
ATOM 12 O2' U B 48 -24.841 36.082 -23.866 1.00 55.81 O
ATOM 13 C1' U B 48 -22.685 36.113 -22.823 1.00 51.22 C
ATOM 14 N1 U B 48 -22.397 37.359 -22.079 1.00 48.22 N
ATOM 15 C2 U B 48 -22.809 37.461 -20.769 1.00 47.24 C
ATOM 16 O2 U B 48 -23.398 36.572 -20.182 1.00 47.37 O
ATOM 17 N3 U B 48 -22.511 38.647 -20.155 1.00 45.40 N
ATOM 18 C4 U B 48 -21.852 39.725 -20.705 1.00 48.36 C
ATOM 19 O4 U B 48 -21.656 40.727 -20.020 1.00 51.14 O
ATOM 20 C5 U B 48 -21.452 39.543 -22.078 1.00 51.17 C
ATOM 21 C6 U B 48 -21.734 38.391 -22.702 1.00 50.85 C
ATOM 22 P C B 49 -24.511 33.355 -25.613 1.00 72.53 P
ATOM 23 OP1 C B 49 -24.758 34.229 -26.783 1.00 68.09 O
ATOM 24 OP2 C B 49 -25.605 32.994 -24.676 1.00 66.07 O
ATOM 25 O5' C B 49 -23.832 31.995 -26.104 1.00 75.95 O
TER
ATOM 2 P G A 50 -19.592 29.993 -24.045 1.00 85.65 P
ATOM 3 OP1 G A 50 -18.953 28.697 -23.721 1.00 87.23 O
ATOM 4 OP2 G A 50 -21.013 30.225 -23.682 1.00 79.37 O
ATOM 5 O5' G A 50 -18.653 31.128 -23.414 1.00 70.85 O
ATOM 6 C5' G A 50 -18.115 32.176 -24.210 1.00 64.55 C
ATOM 7 C4' G A 50 -17.748 33.370 -23.349 1.00 57.56 C
ATOM 8 O4' G A 50 -18.914 34.215 -23.195 1.00 56.91 O
ATOM 9 C3' G A 50 -17.334 33.065 -21.915 1.00 54.98 C
ATOM 10 O3' G A 50 -15.962 32.707 -21.814 1.00 53.38 O
ATOM 11 C2' G A 50 -17.580 34.414 -21.258 1.00 52.30 C
ATOM 12 O2' G A 50 -16.570 35.344 -21.585 1.00 51.71 O
ATOM 13 C1' G A 50 -18.894 34.820 -21.914 1.00 52.56 C
ATOM 14 N9 G A 50 -20.059 34.368 -21.161 1.00 50.33 N
ATOM 15 C8 G A 50 -20.912 33.347 -21.494 1.00 51.45 C
ATOM 16 N7 G A 50 -21.867 33.164 -20.627 1.00 49.42 N
ATOM 17 C5 G A 50 -21.628 34.123 -19.655 1.00 46.25 C
ATOM 18 C6 G A 50 -22.337 34.403 -18.466 1.00 45.71 C
ATOM 19 O6 G A 50 -23.351 33.838 -18.033 1.00 45.45 O
ATOM 20 N1 G A 50 -21.763 35.457 -17.757 1.00 44.25 N
ATOM 21 C2 G A 50 -20.646 36.150 -18.154 1.00 45.28 C
ATOM 22 N2 G A 50 -20.238 37.135 -17.340 1.00 45.35 N
ATOM 23 N3 G A 50 -19.973 35.894 -19.268 1.00 46.79 N
ATOM 24 C4 G A 50 -20.519 34.872 -19.967 1.00 47.28 C
ATOM 25 P G A 51 -15.517 31.650 -20.695 1.00 53.92 P
ATOM 26 OP1 G A 51 -14.054 31.470 -20.814 1.00 51.21 O
ATOM 27 OP2 G A 51 -16.414 30.477 -20.793 1.00 52.75 O
ATOM 28 O5' G A 51 -15.813 32.389 -19.310 1.00 47.84 O
TER
ATOM 1 O3' A B 47 -18.384 37.686 -26.573 1.00 62.51 O
ATOM 2 P U B 48 -19.861 37.953 -27.146 1.00 66.38 P
ATOM 3 OP1 U B 48 -19.822 37.786 -28.617 1.00 66.59 O
ATOM 4 OP2 U B 48 -20.374 39.213 -26.558 1.00 60.72 O
ATOM 5 O5' U B 48 -20.682 36.746 -26.504 1.00 58.52 O
ATOM 6 C5' U B 48 -20.624 36.618 -25.106 1.00 57.20 C
ATOM 7 C4' U B 48 -21.392 35.411 -24.628 1.00 58.66 C
ATOM 8 O4' U B 48 -21.459 35.523 -23.189 1.00 55.89 O
ATOM 9 C3' U B 48 -22.846 35.333 -25.055 1.00 59.15 C
ATOM 10 O3' U B 48 -23.324 34.027 -24.776 1.00 66.98 O
ATOM 11 C2' U B 48 -23.475 36.346 -24.107 1.00 54.83 C
ATOM 12 O2' U B 48 -24.841 36.082 -23.866 1.00 55.81 O
ATOM 13 C1' U B 48 -22.685 36.113 -22.823 1.00 51.22 C
ATOM 14 N1 U B 48 -22.397 37.359 -22.079 1.00 48.22 N
ATOM 15 C2 U B 48 -22.809 37.461 -20.769 1.00 47.24 C
ATOM 16 O2 U B 48 -23.398 36.572 -20.182 1.00 47.37 O
ATOM 17 N3 U B 48 -22.511 38.647 -20.155 1.00 45.40 N
ATOM 18 C4 U B 48 -21.852 39.725 -20.705 1.00 48.36 C
ATOM 19 O4 U B 48 -21.656 40.727 -20.020 1.00 51.14 O
ATOM 20 C5 U B 48 -21.452 39.543 -22.078 1.00 51.17 C
ATOM 21 C6 U B 48 -21.734 38.391 -22.702 1.00 50.85 C
ATOM 22 P C B 49 -24.511 33.355 -25.613 1.00 72.53 P
ATOM 23 OP1 C B 49 -24.758 34.229 -26.783 1.00 68.09 O
ATOM 24 OP2 C B 49 -25.605 32.994 -24.676 1.00 66.07 O
ATOM 25 O5' C B 49 -23.832 31.995 -26.104 1.00 75.95 O
TER
Atoms:
OP1: (-18.953,28.697,-23.721)
OP2: (-21.013,30.225,-23.682)
C3': (-17.334,33.065,-21.915)
C1': (-18.894,34.820,-21.914)
C5': (-18.115,32.176,-24.210)
O6: (-23.351,33.838,-18.033)
O4': (-18.914,34.215,-23.195)
C8: (-20.912,33.347,-21.494)
C2: (-20.646,36.150,-18.154)
C6: (-22.337,34.403,-18.466)
C5: (-21.628,34.123,-19.655)
C4: (-20.519,34.872,-19.967)
P: (-19.592,29.993,-24.045)
C4': (-17.748,33.370,-23.349)
C2': (-17.580,34.414,-21.258)
O2': (-16.570,35.344,-21.585)
N1: (-21.763,35.457,-17.757)
N2: (-20.238,37.135,-17.340)
N3: (-19.973,35.894,-19.268)
N7: (-21.867,33.164,-20.627)
N9: (-20.059,34.368,-21.161)
O5': (-18.653,31.128,-23.414)
O3': (-15.962,32.707,-21.814)
OP2: (-21.013,30.225,-23.682)
C3': (-17.334,33.065,-21.915)
C1': (-18.894,34.820,-21.914)
C5': (-18.115,32.176,-24.210)
O6: (-23.351,33.838,-18.033)
O4': (-18.914,34.215,-23.195)
C8: (-20.912,33.347,-21.494)
C2: (-20.646,36.150,-18.154)
C6: (-22.337,34.403,-18.466)
C5: (-21.628,34.123,-19.655)
C4: (-20.519,34.872,-19.967)
P: (-19.592,29.993,-24.045)
C4': (-17.748,33.370,-23.349)
C2': (-17.580,34.414,-21.258)
O2': (-16.570,35.344,-21.585)
N1: (-21.763,35.457,-17.757)
N2: (-20.238,37.135,-17.340)
N3: (-19.973,35.894,-19.268)
N7: (-21.867,33.164,-20.627)
N9: (-20.059,34.368,-21.161)
O5': (-18.653,31.128,-23.414)
O3': (-15.962,32.707,-21.814)
C4: (-21.852,39.725,-20.705)
N3: (-22.511,38.647,-20.155)
OP1: (-19.822,37.786,-28.617)
OP2: (-20.374,39.213,-26.558)
C2: (-22.809,37.461,-20.769)
C1': (-22.685,36.113,-22.823)
C3': (-22.846,35.333,-25.055)
O5': (-20.682,36.746,-26.504)
O4': (-21.459,35.523,-23.189)
C5': (-20.624,36.618,-25.106)
P: (-19.861,37.953,-27.146)
C4': (-21.392,35.411,-24.628)
C2': (-23.475,36.346,-24.107)
O2': (-24.841,36.082,-23.866)
N1: (-22.397,37.359,-22.079)
O4: (-21.656,40.727,-20.020)
O2: (-23.398,36.572,-20.182)
C6: (-21.734,38.391,-22.702)
C5: (-21.452,39.543,-22.078)
O3': (-23.324,34.027,-24.776)
N3: (-22.511,38.647,-20.155)
OP1: (-19.822,37.786,-28.617)
OP2: (-20.374,39.213,-26.558)
C2: (-22.809,37.461,-20.769)
C1': (-22.685,36.113,-22.823)
C3': (-22.846,35.333,-25.055)
O5': (-20.682,36.746,-26.504)
O4': (-21.459,35.523,-23.189)
C5': (-20.624,36.618,-25.106)
P: (-19.861,37.953,-27.146)
C4': (-21.392,35.411,-24.628)
C2': (-23.475,36.346,-24.107)
O2': (-24.841,36.082,-23.866)
N1: (-22.397,37.359,-22.079)
O4: (-21.656,40.727,-20.020)
O2: (-23.398,36.572,-20.182)
C6: (-21.734,38.391,-22.702)
C5: (-21.452,39.543,-22.078)
O3': (-23.324,34.027,-24.776)
Image (generated by PyMOL):