Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIX:A53:A51
Extra
PDB:
ATOM 1 O3' C A 52 -16.620 62.138 12.294 1.00 31.95 O
ATOM 2 P G A 53 -15.058 62.153 12.628 1.00 31.43 P
ATOM 3 OP1 G A 53 -14.931 61.880 14.079 1.00 31.52 O
ATOM 4 OP2 G A 53 -14.489 63.396 12.055 1.00 31.73 O
ATOM 5 O5' G A 53 -14.463 60.919 11.799 1.00 30.44 O
ATOM 6 C5' G A 53 -14.754 59.576 12.166 1.00 28.79 C
ATOM 7 C4' G A 53 -14.294 58.600 11.097 1.00 27.48 C
ATOM 8 O4' G A 53 -14.687 59.049 9.769 1.00 27.25 O
ATOM 9 C3' G A 53 -12.791 58.400 10.978 1.00 26.50 C
ATOM 10 O3' G A 53 -12.305 57.531 12.000 1.00 26.14 O
ATOM 11 C2' G A 53 -12.738 57.757 9.596 1.00 26.22 C
ATOM 12 O2' G A 53 -13.207 56.423 9.597 1.00 25.33 O
ATOM 13 C1' G A 53 -13.705 58.651 8.821 1.00 26.73 C
ATOM 14 N9 G A 53 -13.082 59.844 8.230 1.00 26.81 N
ATOM 15 C8 G A 53 -13.367 61.149 8.555 1.00 26.83 C
ATOM 16 N7 G A 53 -12.672 62.028 7.891 1.00 27.12 N
ATOM 17 C5 G A 53 -11.863 61.264 7.064 1.00 26.94 C
ATOM 18 C6 G A 53 -10.894 61.673 6.112 1.00 26.91 C
ATOM 19 O6 G A 53 -10.559 62.827 5.813 1.00 27.06 O
ATOM 20 N1 G A 53 -10.284 60.591 5.475 1.00 26.91 N
ATOM 21 C2 G A 53 -10.578 59.272 5.727 1.00 26.71 C
ATOM 22 N2 G A 53 -9.891 58.363 5.018 1.00 26.18 N
ATOM 23 N3 G A 53 -11.489 58.878 6.617 1.00 27.17 N
ATOM 24 C4 G A 53 -12.100 59.917 7.253 1.00 26.96 C
ATOM 25 P G A 54 -10.904 57.781 12.751 1.00 25.55 P
ATOM 26 OP1 G A 54 -10.765 56.734 13.785 1.00 25.46 O
ATOM 27 OP2 G A 54 -10.820 59.210 13.132 1.00 25.75 O
ATOM 28 O5' G A 54 -9.803 57.515 11.631 1.00 25.27 O
TER
ATOM 1 O3' A B 50 -18.496 56.313 7.869 1.00 30.72 O
ATOM 2 P U B 51 -19.179 57.389 6.882 1.00 31.92 P
ATOM 3 OP1 U B 51 -20.232 58.125 7.622 1.00 31.80 O
ATOM 4 OP2 U B 51 -19.545 56.726 5.610 1.00 31.69 O
ATOM 5 O5' U B 51 -17.952 58.374 6.607 1.00 31.92 O
ATOM 6 C5' U B 51 -17.509 59.247 7.636 1.00 32.01 C
ATOM 7 C4' U B 51 -16.928 60.511 7.039 1.00 32.02 C
ATOM 8 O4' U B 51 -15.621 60.181 6.519 1.00 32.27 O
ATOM 9 C3' U B 51 -17.730 61.127 5.886 1.00 32.33 C
ATOM 10 O3' U B 51 -18.301 62.452 6.159 1.00 33.06 O
ATOM 11 C2' U B 51 -16.813 61.013 4.655 1.00 32.11 C
ATOM 12 O2' U B 51 -16.760 62.171 3.847 1.00 32.92 O
ATOM 13 C1' U B 51 -15.431 60.734 5.234 1.00 31.89 C
ATOM 14 N1 U B 51 -14.601 59.792 4.386 1.00 31.94 N
ATOM 15 C2 U B 51 -13.507 60.290 3.692 1.00 31.72 C
ATOM 16 O2 U B 51 -13.153 61.458 3.719 1.00 31.92 O
ATOM 17 N3 U B 51 -12.825 59.356 2.948 1.00 31.21 N
ATOM 18 C4 U B 51 -13.114 58.009 2.820 1.00 30.80 C
ATOM 19 O4 U B 51 -12.402 57.309 2.108 1.00 30.96 O
ATOM 20 C5 U B 51 -14.263 57.559 3.566 1.00 30.66 C
ATOM 21 C6 U B 51 -14.944 58.447 4.304 1.00 31.26 C
ATOM 22 P C B 52 -17.576 63.730 6.816 1.00 33.13 P
ATOM 23 OP1 C B 52 -18.141 64.921 6.143 1.00 32.45 O
ATOM 24 OP2 C B 52 -16.106 63.520 6.840 1.00 33.19 O
ATOM 25 O5' C B 52 -18.121 63.736 8.322 1.00 33.01 O
TER
ATOM 2 P G A 53 -15.058 62.153 12.628 1.00 31.43 P
ATOM 3 OP1 G A 53 -14.931 61.880 14.079 1.00 31.52 O
ATOM 4 OP2 G A 53 -14.489 63.396 12.055 1.00 31.73 O
ATOM 5 O5' G A 53 -14.463 60.919 11.799 1.00 30.44 O
ATOM 6 C5' G A 53 -14.754 59.576 12.166 1.00 28.79 C
ATOM 7 C4' G A 53 -14.294 58.600 11.097 1.00 27.48 C
ATOM 8 O4' G A 53 -14.687 59.049 9.769 1.00 27.25 O
ATOM 9 C3' G A 53 -12.791 58.400 10.978 1.00 26.50 C
ATOM 10 O3' G A 53 -12.305 57.531 12.000 1.00 26.14 O
ATOM 11 C2' G A 53 -12.738 57.757 9.596 1.00 26.22 C
ATOM 12 O2' G A 53 -13.207 56.423 9.597 1.00 25.33 O
ATOM 13 C1' G A 53 -13.705 58.651 8.821 1.00 26.73 C
ATOM 14 N9 G A 53 -13.082 59.844 8.230 1.00 26.81 N
ATOM 15 C8 G A 53 -13.367 61.149 8.555 1.00 26.83 C
ATOM 16 N7 G A 53 -12.672 62.028 7.891 1.00 27.12 N
ATOM 17 C5 G A 53 -11.863 61.264 7.064 1.00 26.94 C
ATOM 18 C6 G A 53 -10.894 61.673 6.112 1.00 26.91 C
ATOM 19 O6 G A 53 -10.559 62.827 5.813 1.00 27.06 O
ATOM 20 N1 G A 53 -10.284 60.591 5.475 1.00 26.91 N
ATOM 21 C2 G A 53 -10.578 59.272 5.727 1.00 26.71 C
ATOM 22 N2 G A 53 -9.891 58.363 5.018 1.00 26.18 N
ATOM 23 N3 G A 53 -11.489 58.878 6.617 1.00 27.17 N
ATOM 24 C4 G A 53 -12.100 59.917 7.253 1.00 26.96 C
ATOM 25 P G A 54 -10.904 57.781 12.751 1.00 25.55 P
ATOM 26 OP1 G A 54 -10.765 56.734 13.785 1.00 25.46 O
ATOM 27 OP2 G A 54 -10.820 59.210 13.132 1.00 25.75 O
ATOM 28 O5' G A 54 -9.803 57.515 11.631 1.00 25.27 O
TER
ATOM 1 O3' A B 50 -18.496 56.313 7.869 1.00 30.72 O
ATOM 2 P U B 51 -19.179 57.389 6.882 1.00 31.92 P
ATOM 3 OP1 U B 51 -20.232 58.125 7.622 1.00 31.80 O
ATOM 4 OP2 U B 51 -19.545 56.726 5.610 1.00 31.69 O
ATOM 5 O5' U B 51 -17.952 58.374 6.607 1.00 31.92 O
ATOM 6 C5' U B 51 -17.509 59.247 7.636 1.00 32.01 C
ATOM 7 C4' U B 51 -16.928 60.511 7.039 1.00 32.02 C
ATOM 8 O4' U B 51 -15.621 60.181 6.519 1.00 32.27 O
ATOM 9 C3' U B 51 -17.730 61.127 5.886 1.00 32.33 C
ATOM 10 O3' U B 51 -18.301 62.452 6.159 1.00 33.06 O
ATOM 11 C2' U B 51 -16.813 61.013 4.655 1.00 32.11 C
ATOM 12 O2' U B 51 -16.760 62.171 3.847 1.00 32.92 O
ATOM 13 C1' U B 51 -15.431 60.734 5.234 1.00 31.89 C
ATOM 14 N1 U B 51 -14.601 59.792 4.386 1.00 31.94 N
ATOM 15 C2 U B 51 -13.507 60.290 3.692 1.00 31.72 C
ATOM 16 O2 U B 51 -13.153 61.458 3.719 1.00 31.92 O
ATOM 17 N3 U B 51 -12.825 59.356 2.948 1.00 31.21 N
ATOM 18 C4 U B 51 -13.114 58.009 2.820 1.00 30.80 C
ATOM 19 O4 U B 51 -12.402 57.309 2.108 1.00 30.96 O
ATOM 20 C5 U B 51 -14.263 57.559 3.566 1.00 30.66 C
ATOM 21 C6 U B 51 -14.944 58.447 4.304 1.00 31.26 C
ATOM 22 P C B 52 -17.576 63.730 6.816 1.00 33.13 P
ATOM 23 OP1 C B 52 -18.141 64.921 6.143 1.00 32.45 O
ATOM 24 OP2 C B 52 -16.106 63.520 6.840 1.00 33.19 O
ATOM 25 O5' C B 52 -18.121 63.736 8.322 1.00 33.01 O
TER
Atoms:
OP1: (-14.931,61.880,14.079)
OP2: (-14.489,63.396,12.055)
C3': (-12.791,58.400,10.978)
C1': (-13.705,58.651,8.821)
C5': (-14.754,59.576,12.166)
O6: (-10.559,62.827,5.813)
O4': (-14.687,59.049,9.769)
C8: (-13.367,61.149,8.555)
C2: (-10.578,59.272,5.727)
C6: (-10.894,61.673,6.112)
C5: (-11.863,61.264,7.064)
C4: (-12.100,59.917,7.253)
P: (-15.058,62.153,12.628)
C4': (-14.294,58.600,11.097)
C2': (-12.738,57.757,9.596)
O2': (-13.207,56.423,9.597)
N1: (-10.284,60.591,5.475)
N2: (-9.891,58.363,5.018)
N3: (-11.489,58.878,6.617)
N7: (-12.672,62.028,7.891)
N9: (-13.082,59.844,8.230)
O5': (-14.463,60.919,11.799)
O3': (-12.305,57.531,12.000)
OP2: (-14.489,63.396,12.055)
C3': (-12.791,58.400,10.978)
C1': (-13.705,58.651,8.821)
C5': (-14.754,59.576,12.166)
O6: (-10.559,62.827,5.813)
O4': (-14.687,59.049,9.769)
C8: (-13.367,61.149,8.555)
C2: (-10.578,59.272,5.727)
C6: (-10.894,61.673,6.112)
C5: (-11.863,61.264,7.064)
C4: (-12.100,59.917,7.253)
P: (-15.058,62.153,12.628)
C4': (-14.294,58.600,11.097)
C2': (-12.738,57.757,9.596)
O2': (-13.207,56.423,9.597)
N1: (-10.284,60.591,5.475)
N2: (-9.891,58.363,5.018)
N3: (-11.489,58.878,6.617)
N7: (-12.672,62.028,7.891)
N9: (-13.082,59.844,8.230)
O5': (-14.463,60.919,11.799)
O3': (-12.305,57.531,12.000)
C4: (-13.114,58.009,2.820)
N3: (-12.825,59.356,2.948)
OP1: (-20.232,58.125,7.622)
OP2: (-19.545,56.726,5.610)
C2: (-13.507,60.290,3.692)
C1': (-15.431,60.734,5.234)
C3': (-17.730,61.127,5.886)
O5': (-17.952,58.374,6.607)
O4': (-15.621,60.181,6.519)
C5': (-17.509,59.247,7.636)
P: (-19.179,57.389,6.882)
C4': (-16.928,60.511,7.039)
C2': (-16.813,61.013,4.655)
O2': (-16.760,62.171,3.847)
N1: (-14.601,59.792,4.386)
O4: (-12.402,57.309,2.108)
O2: (-13.153,61.458,3.719)
C6: (-14.944,58.447,4.304)
C5: (-14.263,57.559,3.566)
O3': (-18.301,62.452,6.159)
N3: (-12.825,59.356,2.948)
OP1: (-20.232,58.125,7.622)
OP2: (-19.545,56.726,5.610)
C2: (-13.507,60.290,3.692)
C1': (-15.431,60.734,5.234)
C3': (-17.730,61.127,5.886)
O5': (-17.952,58.374,6.607)
O4': (-15.621,60.181,6.519)
C5': (-17.509,59.247,7.636)
P: (-19.179,57.389,6.882)
C4': (-16.928,60.511,7.039)
C2': (-16.813,61.013,4.655)
O2': (-16.760,62.171,3.847)
N1: (-14.601,59.792,4.386)
O4: (-12.402,57.309,2.108)
O2: (-13.153,61.458,3.719)
C6: (-14.944,58.447,4.304)
C5: (-14.263,57.559,3.566)
O3': (-18.301,62.452,6.159)
Image (generated by PyMOL):