Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2470:A2469
Extra
PDB:
ATOM 1 O3' A A2469 -114.458 -52.029 -42.927 1.00 8.19 O
ATOM 2 P U A2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 3 OP1 U A2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 4 OP2 U A2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 5 O5' U A2470 -112.816 -53.857 -42.715 1.00 6.46 O
ATOM 6 C5' U A2470 -111.752 -53.108 -42.163 1.00 6.46 C
ATOM 7 C4' U A2470 -110.984 -53.917 -41.165 1.00 6.46 C
ATOM 8 O4' U A2470 -111.845 -54.238 -40.056 1.00 6.46 O
ATOM 9 C3' U A2470 -110.478 -55.255 -41.668 1.00 6.46 C
ATOM 10 O3' U A2470 -109.216 -55.149 -42.237 1.00 6.46 O
ATOM 11 C2' U A2470 -110.472 -56.123 -40.439 1.00 6.46 C
ATOM 12 O2' U A2470 -109.277 -55.926 -39.704 1.00 6.46 O
ATOM 13 C1' U A2470 -111.641 -55.562 -39.647 1.00 6.46 C
ATOM 14 N1 U A2470 -112.868 -56.311 -39.889 1.00 6.65 N
ATOM 15 C2 U A2470 -112.832 -57.516 -39.296 1.00 6.65 C
ATOM 16 O2 U A2470 -111.851 -57.850 -38.683 1.00 6.65 O
ATOM 17 N3 U A2470 -113.932 -58.290 -39.445 1.00 6.65 N
ATOM 18 C4 U A2470 -115.042 -57.947 -40.146 1.00 6.65 C
ATOM 19 O4 U A2470 -115.929 -58.787 -40.182 1.00 6.65 O
ATOM 20 C5 U A2470 -115.018 -56.653 -40.753 1.00 6.65 C
ATOM 21 C6 U A2470 -113.943 -55.885 -40.605 1.00 6.65 C
ATOM 22 P A A2471 -108.945 -55.776 -43.659 1.00 4.33 P
ATOM 23 OP1 A A2471 -110.082 -55.403 -44.534 1.00 4.33 O
ATOM 24 OP2 A A2471 -108.647 -57.208 -43.454 1.00 4.33 O
ATOM 25 O5' A A2471 -107.644 -55.000 -44.110 1.00 4.33 O
TER
ATOM 1 O3' C B2468 -118.837 -51.311 -45.361 1.00 11.54 O
ATOM 2 P A B2469 -119.810 -51.138 -44.117 1.00 8.19 P
ATOM 3 OP1 A B2469 -120.653 -52.347 -44.082 1.00 8.19 O
ATOM 4 OP2 A B2469 -120.458 -49.812 -44.235 1.00 8.19 O
ATOM 5 O5' A B2469 -118.807 -51.129 -42.885 1.00 8.19 O
ATOM 6 C5' A B2469 -117.707 -52.028 -42.835 1.00 8.19 C
ATOM 7 C4' A B2469 -116.606 -51.509 -41.943 1.00 8.19 C
ATOM 8 O4' A B2469 -117.065 -51.465 -40.566 1.00 8.19 O
ATOM 9 C3' A B2469 -115.358 -52.355 -41.902 1.00 8.19 C
ATOM 10 O3' A B2469 -114.458 -52.029 -42.927 1.00 8.19 O
ATOM 11 C2' A B2469 -114.815 -52.093 -40.518 1.00 8.19 C
ATOM 12 O2' A B2469 -114.160 -50.839 -40.472 1.00 8.19 O
ATOM 13 C1' A B2469 -116.098 -52.001 -39.713 1.00 8.19 C
ATOM 14 N9 A B2469 -116.585 -53.324 -39.273 1.00 8.18 N
ATOM 15 C8 A B2469 -117.814 -53.791 -39.640 1.00 8.18 C
ATOM 16 N7 A B2469 -118.115 -54.970 -39.155 1.00 8.18 N
ATOM 17 C5 A B2469 -117.004 -55.336 -38.413 1.00 8.18 C
ATOM 18 C6 A B2469 -116.722 -56.500 -37.659 1.00 8.18 C
ATOM 19 N6 A B2469 -117.558 -57.537 -37.525 1.00 8.18 N
ATOM 20 N1 A B2469 -115.534 -56.570 -37.032 1.00 8.18 N
ATOM 21 C2 A B2469 -114.701 -55.531 -37.172 1.00 8.18 C
ATOM 22 N3 A B2469 -114.859 -54.393 -37.848 1.00 8.18 N
ATOM 23 C4 A B2469 -116.051 -54.331 -38.465 1.00 8.18 C
ATOM 24 P U B2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 25 OP1 U B2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 26 OP2 U B2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 27 O5' U B2470 -112.816 -53.857 -42.715 1.00 6.46 O
TER
ATOM 2 P U A2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 3 OP1 U A2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 4 OP2 U A2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 5 O5' U A2470 -112.816 -53.857 -42.715 1.00 6.46 O
ATOM 6 C5' U A2470 -111.752 -53.108 -42.163 1.00 6.46 C
ATOM 7 C4' U A2470 -110.984 -53.917 -41.165 1.00 6.46 C
ATOM 8 O4' U A2470 -111.845 -54.238 -40.056 1.00 6.46 O
ATOM 9 C3' U A2470 -110.478 -55.255 -41.668 1.00 6.46 C
ATOM 10 O3' U A2470 -109.216 -55.149 -42.237 1.00 6.46 O
ATOM 11 C2' U A2470 -110.472 -56.123 -40.439 1.00 6.46 C
ATOM 12 O2' U A2470 -109.277 -55.926 -39.704 1.00 6.46 O
ATOM 13 C1' U A2470 -111.641 -55.562 -39.647 1.00 6.46 C
ATOM 14 N1 U A2470 -112.868 -56.311 -39.889 1.00 6.65 N
ATOM 15 C2 U A2470 -112.832 -57.516 -39.296 1.00 6.65 C
ATOM 16 O2 U A2470 -111.851 -57.850 -38.683 1.00 6.65 O
ATOM 17 N3 U A2470 -113.932 -58.290 -39.445 1.00 6.65 N
ATOM 18 C4 U A2470 -115.042 -57.947 -40.146 1.00 6.65 C
ATOM 19 O4 U A2470 -115.929 -58.787 -40.182 1.00 6.65 O
ATOM 20 C5 U A2470 -115.018 -56.653 -40.753 1.00 6.65 C
ATOM 21 C6 U A2470 -113.943 -55.885 -40.605 1.00 6.65 C
ATOM 22 P A A2471 -108.945 -55.776 -43.659 1.00 4.33 P
ATOM 23 OP1 A A2471 -110.082 -55.403 -44.534 1.00 4.33 O
ATOM 24 OP2 A A2471 -108.647 -57.208 -43.454 1.00 4.33 O
ATOM 25 O5' A A2471 -107.644 -55.000 -44.110 1.00 4.33 O
TER
ATOM 1 O3' C B2468 -118.837 -51.311 -45.361 1.00 11.54 O
ATOM 2 P A B2469 -119.810 -51.138 -44.117 1.00 8.19 P
ATOM 3 OP1 A B2469 -120.653 -52.347 -44.082 1.00 8.19 O
ATOM 4 OP2 A B2469 -120.458 -49.812 -44.235 1.00 8.19 O
ATOM 5 O5' A B2469 -118.807 -51.129 -42.885 1.00 8.19 O
ATOM 6 C5' A B2469 -117.707 -52.028 -42.835 1.00 8.19 C
ATOM 7 C4' A B2469 -116.606 -51.509 -41.943 1.00 8.19 C
ATOM 8 O4' A B2469 -117.065 -51.465 -40.566 1.00 8.19 O
ATOM 9 C3' A B2469 -115.358 -52.355 -41.902 1.00 8.19 C
ATOM 10 O3' A B2469 -114.458 -52.029 -42.927 1.00 8.19 O
ATOM 11 C2' A B2469 -114.815 -52.093 -40.518 1.00 8.19 C
ATOM 12 O2' A B2469 -114.160 -50.839 -40.472 1.00 8.19 O
ATOM 13 C1' A B2469 -116.098 -52.001 -39.713 1.00 8.19 C
ATOM 14 N9 A B2469 -116.585 -53.324 -39.273 1.00 8.18 N
ATOM 15 C8 A B2469 -117.814 -53.791 -39.640 1.00 8.18 C
ATOM 16 N7 A B2469 -118.115 -54.970 -39.155 1.00 8.18 N
ATOM 17 C5 A B2469 -117.004 -55.336 -38.413 1.00 8.18 C
ATOM 18 C6 A B2469 -116.722 -56.500 -37.659 1.00 8.18 C
ATOM 19 N6 A B2469 -117.558 -57.537 -37.525 1.00 8.18 N
ATOM 20 N1 A B2469 -115.534 -56.570 -37.032 1.00 8.18 N
ATOM 21 C2 A B2469 -114.701 -55.531 -37.172 1.00 8.18 C
ATOM 22 N3 A B2469 -114.859 -54.393 -37.848 1.00 8.18 N
ATOM 23 C4 A B2469 -116.051 -54.331 -38.465 1.00 8.18 C
ATOM 24 P U B2470 -113.783 -53.191 -43.772 1.00 6.46 P
ATOM 25 OP1 U B2470 -112.981 -52.566 -44.848 1.00 6.46 O
ATOM 26 OP2 U B2470 -114.873 -54.122 -44.145 1.00 6.46 O
ATOM 27 O5' U B2470 -112.816 -53.857 -42.715 1.00 6.46 O
TER
Atoms:
C4: (-115.042,-57.947,-40.146)
N3: (-113.932,-58.290,-39.445)
OP1: (-112.981,-52.566,-44.848)
OP2: (-114.873,-54.122,-44.145)
C2: (-112.832,-57.516,-39.296)
C1': (-111.641,-55.562,-39.647)
C3': (-110.478,-55.255,-41.668)
O5': (-112.816,-53.857,-42.715)
O4': (-111.845,-54.238,-40.056)
C5': (-111.752,-53.108,-42.163)
P: (-113.783,-53.191,-43.772)
C4': (-110.984,-53.917,-41.165)
C2': (-110.472,-56.123,-40.439)
O2': (-109.277,-55.926,-39.704)
N1: (-112.868,-56.311,-39.889)
O4: (-115.929,-58.787,-40.182)
O2: (-111.851,-57.850,-38.683)
C6: (-113.943,-55.885,-40.605)
C5: (-115.018,-56.653,-40.753)
O3': (-109.216,-55.149,-42.237)
N3: (-113.932,-58.290,-39.445)
OP1: (-112.981,-52.566,-44.848)
OP2: (-114.873,-54.122,-44.145)
C2: (-112.832,-57.516,-39.296)
C1': (-111.641,-55.562,-39.647)
C3': (-110.478,-55.255,-41.668)
O5': (-112.816,-53.857,-42.715)
O4': (-111.845,-54.238,-40.056)
C5': (-111.752,-53.108,-42.163)
P: (-113.783,-53.191,-43.772)
C4': (-110.984,-53.917,-41.165)
C2': (-110.472,-56.123,-40.439)
O2': (-109.277,-55.926,-39.704)
N1: (-112.868,-56.311,-39.889)
O4: (-115.929,-58.787,-40.182)
O2: (-111.851,-57.850,-38.683)
C6: (-113.943,-55.885,-40.605)
C5: (-115.018,-56.653,-40.753)
O3': (-109.216,-55.149,-42.237)
OP1: (-120.653,-52.347,-44.082)
OP2: (-120.458,-49.812,-44.235)
C3': (-115.358,-52.355,-41.902)
C1': (-116.098,-52.001,-39.713)
C5': (-117.707,-52.028,-42.835)
O4': (-117.065,-51.465,-40.566)
C8: (-117.814,-53.791,-39.640)
O2': (-114.160,-50.839,-40.472)
C6: (-116.722,-56.500,-37.659)
C5: (-117.004,-55.336,-38.413)
C4: (-116.051,-54.331,-38.465)
P: (-119.810,-51.138,-44.117)
C4': (-116.606,-51.509,-41.943)
C2': (-114.815,-52.093,-40.518)
C2: (-114.701,-55.531,-37.172)
N1: (-115.534,-56.570,-37.032)
N3: (-114.859,-54.393,-37.848)
N6: (-117.558,-57.537,-37.525)
N7: (-118.115,-54.970,-39.155)
N9: (-116.585,-53.324,-39.273)
O5': (-118.807,-51.129,-42.885)
O3': (-114.458,-52.029,-42.927)
OP2: (-120.458,-49.812,-44.235)
C3': (-115.358,-52.355,-41.902)
C1': (-116.098,-52.001,-39.713)
C5': (-117.707,-52.028,-42.835)
O4': (-117.065,-51.465,-40.566)
C8: (-117.814,-53.791,-39.640)
O2': (-114.160,-50.839,-40.472)
C6: (-116.722,-56.500,-37.659)
C5: (-117.004,-55.336,-38.413)
C4: (-116.051,-54.331,-38.465)
P: (-119.810,-51.138,-44.117)
C4': (-116.606,-51.509,-41.943)
C2': (-114.815,-52.093,-40.518)
C2: (-114.701,-55.531,-37.172)
N1: (-115.534,-56.570,-37.032)
N3: (-114.859,-54.393,-37.848)
N6: (-117.558,-57.537,-37.525)
N7: (-118.115,-54.970,-39.155)
N9: (-116.585,-53.324,-39.273)
O5': (-118.807,-51.129,-42.885)
O3': (-114.458,-52.029,-42.927)
Image (generated by PyMOL):