Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01050:01049
Extra
PDB:
ATOM 1 O3' A A1049 14.545 106.725 89.610 1.00 43.21 O
ATOM 2 P U A1050 14.324 106.983 91.175 1.00 43.10 P
ATOM 3 OP1 U A1050 14.709 108.394 91.450 1.00 43.56 O
ATOM 4 OP2 U A1050 14.997 105.875 91.916 1.00 43.44 O
ATOM 5 O5' U A1050 12.750 106.836 91.367 1.00 42.44 O
ATOM 6 C5' U A1050 11.847 107.792 90.788 1.00 42.65 C
ATOM 7 C4' U A1050 10.418 107.323 90.927 1.00 42.71 C
ATOM 8 O4' U A1050 10.223 106.105 90.167 1.00 40.21 O
ATOM 9 C3' U A1050 9.976 106.933 92.326 1.00 42.80 C
ATOM 10 O3' U A1050 9.634 108.044 93.131 1.00 42.90 O
ATOM 11 C2' U A1050 8.770 106.062 92.042 1.00 41.70 C
ATOM 12 O2' U A1050 7.636 106.831 91.715 1.00 43.67 O
ATOM 13 C1' U A1050 9.264 105.289 90.821 1.00 41.32 C
ATOM 14 N1 U A1050 9.921 104.047 91.246 1.00 41.89 N
ATOM 15 C2 U A1050 9.120 102.940 91.439 1.00 40.27 C
ATOM 16 O2 U A1050 7.922 102.956 91.228 1.00 42.24 O
ATOM 17 N3 U A1050 9.776 101.819 91.888 1.00 37.10 N
ATOM 18 C4 U A1050 11.124 101.696 92.148 1.00 35.63 C
ATOM 19 O4 U A1050 11.568 100.625 92.542 1.00 34.64 O
ATOM 20 C5 U A1050 11.888 102.875 91.903 1.00 38.33 C
ATOM 21 C6 U A1050 11.279 103.984 91.468 1.00 40.47 C
ATOM 22 P A A1051 9.822 107.943 94.716 1.00 43.59 P
ATOM 23 OP1 A A1051 9.579 109.303 95.263 1.00 41.15 O
ATOM 24 OP2 A A1051 11.115 107.253 94.983 1.00 42.25 O
ATOM 25 O5' A A1051 8.653 106.958 95.174 1.00 45.12 O
TER
ATOM 1 O3' G B1048 18.740 102.244 89.076 1.00 36.84 O
ATOM 2 P A B1049 17.801 103.007 90.132 1.00 37.18 P
ATOM 3 OP1 A B1049 18.511 104.216 90.602 1.00 37.34 O
ATOM 4 OP2 A B1049 17.336 102.003 91.117 1.00 39.24 O
ATOM 5 O5' A B1049 16.555 103.490 89.266 1.00 39.68 O
ATOM 6 C5' A B1049 16.674 104.607 88.365 1.00 42.83 C
ATOM 7 C4' A B1049 15.307 105.107 87.953 1.00 44.45 C
ATOM 8 O4' A B1049 14.630 104.084 87.183 1.00 45.85 O
ATOM 9 C3' A B1049 14.342 105.424 89.082 1.00 43.96 C
ATOM 10 O3' A B1049 14.545 106.725 89.610 1.00 43.21 O
ATOM 11 C2' A B1049 12.992 105.291 88.396 1.00 44.36 C
ATOM 12 O2' A B1049 12.679 106.407 87.590 1.00 45.96 O
ATOM 13 C1' A B1049 13.246 104.086 87.495 1.00 44.58 C
ATOM 14 N9 A B1049 12.943 102.820 88.160 1.00 45.75 N
ATOM 15 C8 A B1049 13.836 101.934 88.711 1.00 45.44 C
ATOM 16 N7 A B1049 13.274 100.870 89.222 1.00 46.82 N
ATOM 17 C5 A B1049 11.920 101.067 88.996 1.00 45.18 C
ATOM 18 C6 A B1049 10.797 100.292 89.295 1.00 44.49 C
ATOM 19 N6 A B1049 10.857 99.113 89.916 1.00 44.46 N
ATOM 20 N1 A B1049 9.591 100.773 88.935 1.00 44.30 N
ATOM 21 C2 A B1049 9.531 101.955 88.320 1.00 43.21 C
ATOM 22 N3 A B1049 10.513 102.775 87.984 1.00 43.95 N
ATOM 23 C4 A B1049 11.700 102.267 88.352 1.00 45.10 C
ATOM 24 P U B1050 14.324 106.983 91.175 1.00 43.10 P
ATOM 25 OP1 U B1050 14.709 108.394 91.450 1.00 43.56 O
ATOM 26 OP2 U B1050 14.997 105.875 91.916 1.00 43.44 O
ATOM 27 O5' U B1050 12.750 106.836 91.367 1.00 42.44 O
TER
ATOM 2 P U A1050 14.324 106.983 91.175 1.00 43.10 P
ATOM 3 OP1 U A1050 14.709 108.394 91.450 1.00 43.56 O
ATOM 4 OP2 U A1050 14.997 105.875 91.916 1.00 43.44 O
ATOM 5 O5' U A1050 12.750 106.836 91.367 1.00 42.44 O
ATOM 6 C5' U A1050 11.847 107.792 90.788 1.00 42.65 C
ATOM 7 C4' U A1050 10.418 107.323 90.927 1.00 42.71 C
ATOM 8 O4' U A1050 10.223 106.105 90.167 1.00 40.21 O
ATOM 9 C3' U A1050 9.976 106.933 92.326 1.00 42.80 C
ATOM 10 O3' U A1050 9.634 108.044 93.131 1.00 42.90 O
ATOM 11 C2' U A1050 8.770 106.062 92.042 1.00 41.70 C
ATOM 12 O2' U A1050 7.636 106.831 91.715 1.00 43.67 O
ATOM 13 C1' U A1050 9.264 105.289 90.821 1.00 41.32 C
ATOM 14 N1 U A1050 9.921 104.047 91.246 1.00 41.89 N
ATOM 15 C2 U A1050 9.120 102.940 91.439 1.00 40.27 C
ATOM 16 O2 U A1050 7.922 102.956 91.228 1.00 42.24 O
ATOM 17 N3 U A1050 9.776 101.819 91.888 1.00 37.10 N
ATOM 18 C4 U A1050 11.124 101.696 92.148 1.00 35.63 C
ATOM 19 O4 U A1050 11.568 100.625 92.542 1.00 34.64 O
ATOM 20 C5 U A1050 11.888 102.875 91.903 1.00 38.33 C
ATOM 21 C6 U A1050 11.279 103.984 91.468 1.00 40.47 C
ATOM 22 P A A1051 9.822 107.943 94.716 1.00 43.59 P
ATOM 23 OP1 A A1051 9.579 109.303 95.263 1.00 41.15 O
ATOM 24 OP2 A A1051 11.115 107.253 94.983 1.00 42.25 O
ATOM 25 O5' A A1051 8.653 106.958 95.174 1.00 45.12 O
TER
ATOM 1 O3' G B1048 18.740 102.244 89.076 1.00 36.84 O
ATOM 2 P A B1049 17.801 103.007 90.132 1.00 37.18 P
ATOM 3 OP1 A B1049 18.511 104.216 90.602 1.00 37.34 O
ATOM 4 OP2 A B1049 17.336 102.003 91.117 1.00 39.24 O
ATOM 5 O5' A B1049 16.555 103.490 89.266 1.00 39.68 O
ATOM 6 C5' A B1049 16.674 104.607 88.365 1.00 42.83 C
ATOM 7 C4' A B1049 15.307 105.107 87.953 1.00 44.45 C
ATOM 8 O4' A B1049 14.630 104.084 87.183 1.00 45.85 O
ATOM 9 C3' A B1049 14.342 105.424 89.082 1.00 43.96 C
ATOM 10 O3' A B1049 14.545 106.725 89.610 1.00 43.21 O
ATOM 11 C2' A B1049 12.992 105.291 88.396 1.00 44.36 C
ATOM 12 O2' A B1049 12.679 106.407 87.590 1.00 45.96 O
ATOM 13 C1' A B1049 13.246 104.086 87.495 1.00 44.58 C
ATOM 14 N9 A B1049 12.943 102.820 88.160 1.00 45.75 N
ATOM 15 C8 A B1049 13.836 101.934 88.711 1.00 45.44 C
ATOM 16 N7 A B1049 13.274 100.870 89.222 1.00 46.82 N
ATOM 17 C5 A B1049 11.920 101.067 88.996 1.00 45.18 C
ATOM 18 C6 A B1049 10.797 100.292 89.295 1.00 44.49 C
ATOM 19 N6 A B1049 10.857 99.113 89.916 1.00 44.46 N
ATOM 20 N1 A B1049 9.591 100.773 88.935 1.00 44.30 N
ATOM 21 C2 A B1049 9.531 101.955 88.320 1.00 43.21 C
ATOM 22 N3 A B1049 10.513 102.775 87.984 1.00 43.95 N
ATOM 23 C4 A B1049 11.700 102.267 88.352 1.00 45.10 C
ATOM 24 P U B1050 14.324 106.983 91.175 1.00 43.10 P
ATOM 25 OP1 U B1050 14.709 108.394 91.450 1.00 43.56 O
ATOM 26 OP2 U B1050 14.997 105.875 91.916 1.00 43.44 O
ATOM 27 O5' U B1050 12.750 106.836 91.367 1.00 42.44 O
TER
Atoms:
C4: (11.124,101.696,92.148)
N3: (9.776,101.819,91.888)
OP1: (14.709,108.394,91.450)
OP2: (14.997,105.875,91.916)
C2: (9.120,102.940,91.439)
C1': (9.264,105.289,90.821)
C3': (9.976,106.933,92.326)
O5': (12.750,106.836,91.367)
O4': (10.223,106.105,90.167)
C5': (11.847,107.792,90.788)
P: (14.324,106.983,91.175)
C4': (10.418,107.323,90.927)
C2': (8.770,106.062,92.042)
O2': (7.636,106.831,91.715)
N1: (9.921,104.047,91.246)
O4: (11.568,100.625,92.542)
O2: (7.922,102.956,91.228)
C6: (11.279,103.984,91.468)
C5: (11.888,102.875,91.903)
O3': (9.634,108.044,93.131)
N3: (9.776,101.819,91.888)
OP1: (14.709,108.394,91.450)
OP2: (14.997,105.875,91.916)
C2: (9.120,102.940,91.439)
C1': (9.264,105.289,90.821)
C3': (9.976,106.933,92.326)
O5': (12.750,106.836,91.367)
O4': (10.223,106.105,90.167)
C5': (11.847,107.792,90.788)
P: (14.324,106.983,91.175)
C4': (10.418,107.323,90.927)
C2': (8.770,106.062,92.042)
O2': (7.636,106.831,91.715)
N1: (9.921,104.047,91.246)
O4: (11.568,100.625,92.542)
O2: (7.922,102.956,91.228)
C6: (11.279,103.984,91.468)
C5: (11.888,102.875,91.903)
O3': (9.634,108.044,93.131)
OP1: (18.511,104.216,90.602)
OP2: (17.336,102.003,91.117)
C3': (14.342,105.424,89.082)
C1': (13.246,104.086,87.495)
C5': (16.674,104.607,88.365)
O4': (14.630,104.084,87.183)
C8: (13.836,101.934,88.711)
O2': (12.679,106.407,87.590)
C6: (10.797,100.292,89.295)
C5: (11.920,101.067,88.996)
C4: (11.700,102.267,88.352)
P: (17.801,103.007,90.132)
C4': (15.307,105.107,87.953)
C2': (12.992,105.291,88.396)
C2: (9.531,101.955,88.320)
N1: (9.591,100.773,88.935)
N3: (10.513,102.775,87.984)
N6: (10.857,99.113,89.916)
N7: (13.274,100.870,89.222)
N9: (12.943,102.820,88.160)
O5': (16.555,103.490,89.266)
O3': (14.545,106.725,89.610)
OP2: (17.336,102.003,91.117)
C3': (14.342,105.424,89.082)
C1': (13.246,104.086,87.495)
C5': (16.674,104.607,88.365)
O4': (14.630,104.084,87.183)
C8: (13.836,101.934,88.711)
O2': (12.679,106.407,87.590)
C6: (10.797,100.292,89.295)
C5: (11.920,101.067,88.996)
C4: (11.700,102.267,88.352)
P: (17.801,103.007,90.132)
C4': (15.307,105.107,87.953)
C2': (12.992,105.291,88.396)
C2: (9.531,101.955,88.320)
N1: (9.591,100.773,88.935)
N3: (10.513,102.775,87.984)
N6: (10.857,99.113,89.916)
N7: (13.274,100.870,89.222)
N9: (12.943,102.820,88.160)
O5': (16.555,103.490,89.266)
O3': (14.545,106.725,89.610)
Image (generated by PyMOL):