Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A53:A51
Extra
PDB:
ATOM 1 O3' C A 52 -15.939 61.987 12.447 1.00 27.07 O
ATOM 2 P G A 53 -14.360 62.129 12.667 1.00 27.95 P
ATOM 3 OP1 G A 53 -14.090 61.983 14.116 1.00 27.80 O
ATOM 4 OP2 G A 53 -13.902 63.336 11.942 1.00 28.18 O
ATOM 5 O5' G A 53 -13.758 60.864 11.901 1.00 28.74 O
ATOM 6 C5' G A 53 -14.165 59.533 12.212 1.00 28.75 C
ATOM 7 C4' G A 53 -13.687 58.569 11.139 1.00 28.19 C
ATOM 8 O4' G A 53 -14.063 59.012 9.802 1.00 28.64 O
ATOM 9 C3' G A 53 -12.180 58.423 11.056 1.00 27.21 C
ATOM 10 O3' G A 53 -11.726 57.580 12.092 1.00 26.29 O
ATOM 11 C2' G A 53 -12.059 57.785 9.682 1.00 27.55 C
ATOM 12 O2' G A 53 -12.485 56.436 9.677 1.00 26.99 O
ATOM 13 C1' G A 53 -13.034 58.654 8.888 1.00 28.56 C
ATOM 14 N9 G A 53 -12.430 59.871 8.330 1.00 29.04 N
ATOM 15 C8 G A 53 -12.760 61.166 8.656 1.00 29.38 C
ATOM 16 N7 G A 53 -12.064 62.064 8.017 1.00 29.92 N
ATOM 17 C5 G A 53 -11.209 61.326 7.210 1.00 29.41 C
ATOM 18 C6 G A 53 -10.218 61.761 6.290 1.00 29.22 C
ATOM 19 O6 G A 53 -9.895 62.921 5.998 1.00 29.23 O
ATOM 20 N1 G A 53 -9.573 60.694 5.671 1.00 28.90 N
ATOM 21 C2 G A 53 -9.855 59.371 5.913 1.00 28.80 C
ATOM 22 N2 G A 53 -9.135 58.474 5.228 1.00 28.91 N
ATOM 23 N3 G A 53 -10.778 58.953 6.770 1.00 29.00 N
ATOM 24 C4 G A 53 -11.422 59.975 7.387 1.00 29.11 C
ATOM 25 P G A 54 -10.405 57.945 12.920 1.00 25.44 P
ATOM 26 OP1 G A 54 -10.284 56.963 14.018 1.00 25.38 O
ATOM 27 OP2 G A 54 -10.438 59.390 13.230 1.00 26.11 O
ATOM 28 O5' G A 54 -9.223 57.694 11.876 1.00 24.99 O
TER
ATOM 1 O3' A B 50 -17.866 56.177 7.769 1.00 26.30 O
ATOM 2 P U B 51 -18.544 57.192 6.721 1.00 27.73 P
ATOM 3 OP1 U B 51 -19.760 57.796 7.326 1.00 27.56 O
ATOM 4 OP2 U B 51 -18.666 56.483 5.425 1.00 27.57 O
ATOM 5 O5' U B 51 -17.406 58.312 6.558 1.00 28.23 O
ATOM 6 C5' U B 51 -17.088 59.212 7.621 1.00 28.67 C
ATOM 7 C4' U B 51 -16.318 60.410 7.094 1.00 29.11 C
ATOM 8 O4' U B 51 -15.022 59.946 6.640 1.00 29.52 O
ATOM 9 C3' U B 51 -16.980 61.144 5.913 1.00 29.22 C
ATOM 10 O3' U B 51 -17.618 62.429 6.235 1.00 28.49 O
ATOM 11 C2' U B 51 -15.916 61.177 4.801 1.00 29.81 C
ATOM 12 O2' U B 51 -15.656 62.460 4.264 1.00 30.35 O
ATOM 13 C1' U B 51 -14.648 60.626 5.455 1.00 30.48 C
ATOM 14 N1 U B 51 -13.910 59.700 4.519 1.00 31.25 N
ATOM 15 C2 U B 51 -12.767 60.144 3.863 1.00 31.37 C
ATOM 16 O2 U B 51 -12.287 61.260 3.999 1.00 31.56 O
ATOM 17 N3 U B 51 -12.184 59.215 3.028 1.00 31.15 N
ATOM 18 C4 U B 51 -12.621 57.922 2.779 1.00 31.07 C
ATOM 19 O4 U B 51 -12.000 57.206 2.002 1.00 30.95 O
ATOM 20 C5 U B 51 -13.815 57.530 3.488 1.00 31.27 C
ATOM 21 C6 U B 51 -14.400 58.415 4.309 1.00 31.45 C
ATOM 22 P C B 52 -16.974 63.717 6.958 1.00 27.81 P
ATOM 23 OP1 C B 52 -17.652 64.893 6.367 1.00 27.25 O
ATOM 24 OP2 C B 52 -15.493 63.639 6.937 1.00 27.89 O
ATOM 25 O5' C B 52 -17.472 63.571 8.473 1.00 27.00 O
TER
ATOM 2 P G A 53 -14.360 62.129 12.667 1.00 27.95 P
ATOM 3 OP1 G A 53 -14.090 61.983 14.116 1.00 27.80 O
ATOM 4 OP2 G A 53 -13.902 63.336 11.942 1.00 28.18 O
ATOM 5 O5' G A 53 -13.758 60.864 11.901 1.00 28.74 O
ATOM 6 C5' G A 53 -14.165 59.533 12.212 1.00 28.75 C
ATOM 7 C4' G A 53 -13.687 58.569 11.139 1.00 28.19 C
ATOM 8 O4' G A 53 -14.063 59.012 9.802 1.00 28.64 O
ATOM 9 C3' G A 53 -12.180 58.423 11.056 1.00 27.21 C
ATOM 10 O3' G A 53 -11.726 57.580 12.092 1.00 26.29 O
ATOM 11 C2' G A 53 -12.059 57.785 9.682 1.00 27.55 C
ATOM 12 O2' G A 53 -12.485 56.436 9.677 1.00 26.99 O
ATOM 13 C1' G A 53 -13.034 58.654 8.888 1.00 28.56 C
ATOM 14 N9 G A 53 -12.430 59.871 8.330 1.00 29.04 N
ATOM 15 C8 G A 53 -12.760 61.166 8.656 1.00 29.38 C
ATOM 16 N7 G A 53 -12.064 62.064 8.017 1.00 29.92 N
ATOM 17 C5 G A 53 -11.209 61.326 7.210 1.00 29.41 C
ATOM 18 C6 G A 53 -10.218 61.761 6.290 1.00 29.22 C
ATOM 19 O6 G A 53 -9.895 62.921 5.998 1.00 29.23 O
ATOM 20 N1 G A 53 -9.573 60.694 5.671 1.00 28.90 N
ATOM 21 C2 G A 53 -9.855 59.371 5.913 1.00 28.80 C
ATOM 22 N2 G A 53 -9.135 58.474 5.228 1.00 28.91 N
ATOM 23 N3 G A 53 -10.778 58.953 6.770 1.00 29.00 N
ATOM 24 C4 G A 53 -11.422 59.975 7.387 1.00 29.11 C
ATOM 25 P G A 54 -10.405 57.945 12.920 1.00 25.44 P
ATOM 26 OP1 G A 54 -10.284 56.963 14.018 1.00 25.38 O
ATOM 27 OP2 G A 54 -10.438 59.390 13.230 1.00 26.11 O
ATOM 28 O5' G A 54 -9.223 57.694 11.876 1.00 24.99 O
TER
ATOM 1 O3' A B 50 -17.866 56.177 7.769 1.00 26.30 O
ATOM 2 P U B 51 -18.544 57.192 6.721 1.00 27.73 P
ATOM 3 OP1 U B 51 -19.760 57.796 7.326 1.00 27.56 O
ATOM 4 OP2 U B 51 -18.666 56.483 5.425 1.00 27.57 O
ATOM 5 O5' U B 51 -17.406 58.312 6.558 1.00 28.23 O
ATOM 6 C5' U B 51 -17.088 59.212 7.621 1.00 28.67 C
ATOM 7 C4' U B 51 -16.318 60.410 7.094 1.00 29.11 C
ATOM 8 O4' U B 51 -15.022 59.946 6.640 1.00 29.52 O
ATOM 9 C3' U B 51 -16.980 61.144 5.913 1.00 29.22 C
ATOM 10 O3' U B 51 -17.618 62.429 6.235 1.00 28.49 O
ATOM 11 C2' U B 51 -15.916 61.177 4.801 1.00 29.81 C
ATOM 12 O2' U B 51 -15.656 62.460 4.264 1.00 30.35 O
ATOM 13 C1' U B 51 -14.648 60.626 5.455 1.00 30.48 C
ATOM 14 N1 U B 51 -13.910 59.700 4.519 1.00 31.25 N
ATOM 15 C2 U B 51 -12.767 60.144 3.863 1.00 31.37 C
ATOM 16 O2 U B 51 -12.287 61.260 3.999 1.00 31.56 O
ATOM 17 N3 U B 51 -12.184 59.215 3.028 1.00 31.15 N
ATOM 18 C4 U B 51 -12.621 57.922 2.779 1.00 31.07 C
ATOM 19 O4 U B 51 -12.000 57.206 2.002 1.00 30.95 O
ATOM 20 C5 U B 51 -13.815 57.530 3.488 1.00 31.27 C
ATOM 21 C6 U B 51 -14.400 58.415 4.309 1.00 31.45 C
ATOM 22 P C B 52 -16.974 63.717 6.958 1.00 27.81 P
ATOM 23 OP1 C B 52 -17.652 64.893 6.367 1.00 27.25 O
ATOM 24 OP2 C B 52 -15.493 63.639 6.937 1.00 27.89 O
ATOM 25 O5' C B 52 -17.472 63.571 8.473 1.00 27.00 O
TER
Atoms:
OP1: (-14.090,61.983,14.116)
OP2: (-13.902,63.336,11.942)
C3': (-12.180,58.423,11.056)
C1': (-13.034,58.654,8.888)
C5': (-14.165,59.533,12.212)
O6: (-9.895,62.921,5.998)
O4': (-14.063,59.012,9.802)
C8: (-12.760,61.166,8.656)
C2: (-9.855,59.371,5.913)
C6: (-10.218,61.761,6.290)
C5: (-11.209,61.326,7.210)
C4: (-11.422,59.975,7.387)
P: (-14.360,62.129,12.667)
C4': (-13.687,58.569,11.139)
C2': (-12.059,57.785,9.682)
O2': (-12.485,56.436,9.677)
N1: (-9.573,60.694,5.671)
N2: (-9.135,58.474,5.228)
N3: (-10.778,58.953,6.770)
N7: (-12.064,62.064,8.017)
N9: (-12.430,59.871,8.330)
O5': (-13.758,60.864,11.901)
O3': (-11.726,57.580,12.092)
OP2: (-13.902,63.336,11.942)
C3': (-12.180,58.423,11.056)
C1': (-13.034,58.654,8.888)
C5': (-14.165,59.533,12.212)
O6: (-9.895,62.921,5.998)
O4': (-14.063,59.012,9.802)
C8: (-12.760,61.166,8.656)
C2: (-9.855,59.371,5.913)
C6: (-10.218,61.761,6.290)
C5: (-11.209,61.326,7.210)
C4: (-11.422,59.975,7.387)
P: (-14.360,62.129,12.667)
C4': (-13.687,58.569,11.139)
C2': (-12.059,57.785,9.682)
O2': (-12.485,56.436,9.677)
N1: (-9.573,60.694,5.671)
N2: (-9.135,58.474,5.228)
N3: (-10.778,58.953,6.770)
N7: (-12.064,62.064,8.017)
N9: (-12.430,59.871,8.330)
O5': (-13.758,60.864,11.901)
O3': (-11.726,57.580,12.092)
C4: (-12.621,57.922,2.779)
N3: (-12.184,59.215,3.028)
OP1: (-19.760,57.796,7.326)
OP2: (-18.666,56.483,5.425)
C2: (-12.767,60.144,3.863)
C1': (-14.648,60.626,5.455)
C3': (-16.980,61.144,5.913)
O5': (-17.406,58.312,6.558)
O4': (-15.022,59.946,6.640)
C5': (-17.088,59.212,7.621)
P: (-18.544,57.192,6.721)
C4': (-16.318,60.410,7.094)
C2': (-15.916,61.177,4.801)
O2': (-15.656,62.460,4.264)
N1: (-13.910,59.700,4.519)
O4: (-12.000,57.206,2.002)
O2: (-12.287,61.260,3.999)
C6: (-14.400,58.415,4.309)
C5: (-13.815,57.530,3.488)
O3': (-17.618,62.429,6.235)
N3: (-12.184,59.215,3.028)
OP1: (-19.760,57.796,7.326)
OP2: (-18.666,56.483,5.425)
C2: (-12.767,60.144,3.863)
C1': (-14.648,60.626,5.455)
C3': (-16.980,61.144,5.913)
O5': (-17.406,58.312,6.558)
O4': (-15.022,59.946,6.640)
C5': (-17.088,59.212,7.621)
P: (-18.544,57.192,6.721)
C4': (-16.318,60.410,7.094)
C2': (-15.916,61.177,4.801)
O2': (-15.656,62.460,4.264)
N1: (-13.910,59.700,4.519)
O4: (-12.000,57.206,2.002)
O2: (-12.287,61.260,3.999)
C6: (-14.400,58.415,4.309)
C5: (-13.815,57.530,3.488)
O3': (-17.618,62.429,6.235)
Image (generated by PyMOL):