Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIR:A42:A93
Extra
PDB:
ATOM 1 O3' A A 41 -0.949 51.959 6.733 1.00 31.10 O
ATOM 2 P G A 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 3 OP1 G A 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 4 OP2 G A 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 5 O5' G A 42 1.388 51.093 7.042 1.00 32.11 O
ATOM 6 C5' G A 42 1.627 51.280 8.439 1.00 33.50 C
ATOM 7 C4' G A 42 1.793 49.944 9.151 1.00 34.17 C
ATOM 8 O4' G A 42 0.667 49.075 8.843 1.00 34.08 O
ATOM 9 C3' G A 42 3.037 49.150 8.774 1.00 34.68 C
ATOM 10 O3' G A 42 3.459 48.378 9.891 1.00 36.25 O
ATOM 11 C2' G A 42 2.511 48.281 7.630 1.00 34.33 C
ATOM 12 O2' G A 42 3.260 47.102 7.420 1.00 34.98 O
ATOM 13 C1' G A 42 1.098 47.950 8.104 1.00 33.32 C
ATOM 14 N9 G A 42 0.189 47.737 6.986 1.00 32.50 N
ATOM 15 C8 G A 42 -0.672 48.643 6.422 1.00 32.32 C
ATOM 16 N7 G A 42 -1.353 48.164 5.418 1.00 32.01 N
ATOM 17 C5 G A 42 -0.911 46.853 5.306 1.00 32.17 C
ATOM 18 C6 G A 42 -1.281 45.826 4.398 1.00 31.97 C
ATOM 19 O6 G A 42 -2.104 45.869 3.475 1.00 32.17 O
ATOM 20 N1 G A 42 -0.589 44.641 4.636 1.00 31.92 N
ATOM 21 C2 G A 42 0.346 44.464 5.627 1.00 32.16 C
ATOM 22 N2 G A 42 0.915 43.251 5.710 1.00 32.42 N
ATOM 23 N3 G A 42 0.704 45.418 6.478 1.00 32.42 N
ATOM 24 C4 G A 42 0.039 46.579 6.264 1.00 32.31 C
ATOM 25 P G A 43 5.008 48.089 10.183 1.00 37.59 P
ATOM 26 OP1 G A 43 5.055 46.870 11.020 1.00 37.31 O
ATOM 27 OP2 G A 43 5.626 49.342 10.676 1.00 37.82 O
ATOM 28 O5' G A 43 5.616 47.715 8.745 1.00 38.61 O
TER
ATOM 1 O3' U B 92 1.098 43.809 13.735 1.00 29.74 O
ATOM 2 P U B 93 -0.384 44.428 13.850 1.00 29.67 P
ATOM 3 OP1 U B 93 -0.411 45.248 15.081 1.00 29.88 O
ATOM 4 OP2 U B 93 -1.383 43.354 13.678 1.00 29.84 O
ATOM 5 O5' U B 93 -0.514 45.348 12.545 1.00 28.77 O
ATOM 6 C5' U B 93 -0.056 46.699 12.508 1.00 27.96 C
ATOM 7 C4' U B 93 -1.019 47.542 11.693 1.00 27.40 C
ATOM 8 O4' U B 93 -1.119 47.004 10.345 1.00 27.28 O
ATOM 9 C3' U B 93 -2.436 47.584 12.255 1.00 27.04 C
ATOM 10 O3' U B 93 -2.906 48.917 12.316 1.00 26.98 O
ATOM 11 C2' U B 93 -3.249 46.754 11.268 1.00 26.93 C
ATOM 12 O2' U B 93 -4.572 47.222 11.124 1.00 27.06 O
ATOM 13 C1' U B 93 -2.475 46.901 9.959 1.00 26.82 C
ATOM 14 N1 U B 93 -2.683 45.693 9.098 1.00 26.44 N
ATOM 15 C2 U B 93 -3.709 45.667 8.163 1.00 26.82 C
ATOM 16 O2 U B 93 -4.474 46.599 7.959 1.00 27.23 O
ATOM 17 N3 U B 93 -3.816 44.494 7.446 1.00 26.61 N
ATOM 18 C4 U B 93 -3.027 43.363 7.568 1.00 26.30 C
ATOM 19 O4 U B 93 -3.241 42.385 6.860 1.00 26.57 O
ATOM 20 C5 U B 93 -1.989 43.460 8.561 1.00 26.56 C
ATOM 21 C6 U B 93 -1.866 44.590 9.272 1.00 26.62 C
ATOM 22 P C B 94 -3.815 49.405 13.538 1.00 27.07 P
ATOM 23 OP1 C B 94 -4.155 50.830 13.298 1.00 26.64 O
ATOM 24 OP2 C B 94 -3.115 48.981 14.774 1.00 26.72 O
ATOM 25 O5' C B 94 -5.169 48.560 13.391 1.00 27.02 O
TER
ATOM 2 P G A 42 0.556 52.176 6.219 1.00 31.65 P
ATOM 3 OP1 G A 42 1.009 53.513 6.662 1.00 32.23 O
ATOM 4 OP2 G A 42 0.593 51.824 4.779 1.00 31.49 O
ATOM 5 O5' G A 42 1.388 51.093 7.042 1.00 32.11 O
ATOM 6 C5' G A 42 1.627 51.280 8.439 1.00 33.50 C
ATOM 7 C4' G A 42 1.793 49.944 9.151 1.00 34.17 C
ATOM 8 O4' G A 42 0.667 49.075 8.843 1.00 34.08 O
ATOM 9 C3' G A 42 3.037 49.150 8.774 1.00 34.68 C
ATOM 10 O3' G A 42 3.459 48.378 9.891 1.00 36.25 O
ATOM 11 C2' G A 42 2.511 48.281 7.630 1.00 34.33 C
ATOM 12 O2' G A 42 3.260 47.102 7.420 1.00 34.98 O
ATOM 13 C1' G A 42 1.098 47.950 8.104 1.00 33.32 C
ATOM 14 N9 G A 42 0.189 47.737 6.986 1.00 32.50 N
ATOM 15 C8 G A 42 -0.672 48.643 6.422 1.00 32.32 C
ATOM 16 N7 G A 42 -1.353 48.164 5.418 1.00 32.01 N
ATOM 17 C5 G A 42 -0.911 46.853 5.306 1.00 32.17 C
ATOM 18 C6 G A 42 -1.281 45.826 4.398 1.00 31.97 C
ATOM 19 O6 G A 42 -2.104 45.869 3.475 1.00 32.17 O
ATOM 20 N1 G A 42 -0.589 44.641 4.636 1.00 31.92 N
ATOM 21 C2 G A 42 0.346 44.464 5.627 1.00 32.16 C
ATOM 22 N2 G A 42 0.915 43.251 5.710 1.00 32.42 N
ATOM 23 N3 G A 42 0.704 45.418 6.478 1.00 32.42 N
ATOM 24 C4 G A 42 0.039 46.579 6.264 1.00 32.31 C
ATOM 25 P G A 43 5.008 48.089 10.183 1.00 37.59 P
ATOM 26 OP1 G A 43 5.055 46.870 11.020 1.00 37.31 O
ATOM 27 OP2 G A 43 5.626 49.342 10.676 1.00 37.82 O
ATOM 28 O5' G A 43 5.616 47.715 8.745 1.00 38.61 O
TER
ATOM 1 O3' U B 92 1.098 43.809 13.735 1.00 29.74 O
ATOM 2 P U B 93 -0.384 44.428 13.850 1.00 29.67 P
ATOM 3 OP1 U B 93 -0.411 45.248 15.081 1.00 29.88 O
ATOM 4 OP2 U B 93 -1.383 43.354 13.678 1.00 29.84 O
ATOM 5 O5' U B 93 -0.514 45.348 12.545 1.00 28.77 O
ATOM 6 C5' U B 93 -0.056 46.699 12.508 1.00 27.96 C
ATOM 7 C4' U B 93 -1.019 47.542 11.693 1.00 27.40 C
ATOM 8 O4' U B 93 -1.119 47.004 10.345 1.00 27.28 O
ATOM 9 C3' U B 93 -2.436 47.584 12.255 1.00 27.04 C
ATOM 10 O3' U B 93 -2.906 48.917 12.316 1.00 26.98 O
ATOM 11 C2' U B 93 -3.249 46.754 11.268 1.00 26.93 C
ATOM 12 O2' U B 93 -4.572 47.222 11.124 1.00 27.06 O
ATOM 13 C1' U B 93 -2.475 46.901 9.959 1.00 26.82 C
ATOM 14 N1 U B 93 -2.683 45.693 9.098 1.00 26.44 N
ATOM 15 C2 U B 93 -3.709 45.667 8.163 1.00 26.82 C
ATOM 16 O2 U B 93 -4.474 46.599 7.959 1.00 27.23 O
ATOM 17 N3 U B 93 -3.816 44.494 7.446 1.00 26.61 N
ATOM 18 C4 U B 93 -3.027 43.363 7.568 1.00 26.30 C
ATOM 19 O4 U B 93 -3.241 42.385 6.860 1.00 26.57 O
ATOM 20 C5 U B 93 -1.989 43.460 8.561 1.00 26.56 C
ATOM 21 C6 U B 93 -1.866 44.590 9.272 1.00 26.62 C
ATOM 22 P C B 94 -3.815 49.405 13.538 1.00 27.07 P
ATOM 23 OP1 C B 94 -4.155 50.830 13.298 1.00 26.64 O
ATOM 24 OP2 C B 94 -3.115 48.981 14.774 1.00 26.72 O
ATOM 25 O5' C B 94 -5.169 48.560 13.391 1.00 27.02 O
TER
Atoms:
OP1: (1.009,53.513,6.662)
OP2: (0.593,51.824,4.779)
C3': (3.037,49.150,8.774)
C1': (1.098,47.950,8.104)
C5': (1.627,51.280,8.439)
O6: (-2.104,45.869,3.475)
O4': (0.667,49.075,8.843)
C8: (-0.672,48.643,6.422)
C2: (0.346,44.464,5.627)
C6: (-1.281,45.826,4.398)
C5: (-0.911,46.853,5.306)
C4: (0.039,46.579,6.264)
P: (0.556,52.176,6.219)
C4': (1.793,49.944,9.151)
C2': (2.511,48.281,7.630)
O2': (3.260,47.102,7.420)
N1: (-0.589,44.641,4.636)
N2: (0.915,43.251,5.710)
N3: (0.704,45.418,6.478)
N7: (-1.353,48.164,5.418)
N9: (0.189,47.737,6.986)
O5': (1.388,51.093,7.042)
O3': (3.459,48.378,9.891)
OP2: (0.593,51.824,4.779)
C3': (3.037,49.150,8.774)
C1': (1.098,47.950,8.104)
C5': (1.627,51.280,8.439)
O6: (-2.104,45.869,3.475)
O4': (0.667,49.075,8.843)
C8: (-0.672,48.643,6.422)
C2: (0.346,44.464,5.627)
C6: (-1.281,45.826,4.398)
C5: (-0.911,46.853,5.306)
C4: (0.039,46.579,6.264)
P: (0.556,52.176,6.219)
C4': (1.793,49.944,9.151)
C2': (2.511,48.281,7.630)
O2': (3.260,47.102,7.420)
N1: (-0.589,44.641,4.636)
N2: (0.915,43.251,5.710)
N3: (0.704,45.418,6.478)
N7: (-1.353,48.164,5.418)
N9: (0.189,47.737,6.986)
O5': (1.388,51.093,7.042)
O3': (3.459,48.378,9.891)
C4: (-3.027,43.363,7.568)
N3: (-3.816,44.494,7.446)
OP1: (-0.411,45.248,15.081)
OP2: (-1.383,43.354,13.678)
C2: (-3.709,45.667,8.163)
C1': (-2.475,46.901,9.959)
C3': (-2.436,47.584,12.255)
O5': (-0.514,45.348,12.545)
O4': (-1.119,47.004,10.345)
C5': (-0.056,46.699,12.508)
P: (-0.384,44.428,13.850)
C4': (-1.019,47.542,11.693)
C2': (-3.249,46.754,11.268)
O2': (-4.572,47.222,11.124)
N1: (-2.683,45.693,9.098)
O4: (-3.241,42.385,6.860)
O2: (-4.474,46.599,7.959)
C6: (-1.866,44.590,9.272)
C5: (-1.989,43.460,8.561)
O3': (-2.906,48.917,12.316)
N3: (-3.816,44.494,7.446)
OP1: (-0.411,45.248,15.081)
OP2: (-1.383,43.354,13.678)
C2: (-3.709,45.667,8.163)
C1': (-2.475,46.901,9.959)
C3': (-2.436,47.584,12.255)
O5': (-0.514,45.348,12.545)
O4': (-1.119,47.004,10.345)
C5': (-0.056,46.699,12.508)
P: (-0.384,44.428,13.850)
C4': (-1.019,47.542,11.693)
C2': (-3.249,46.754,11.268)
O2': (-4.572,47.222,11.124)
N1: (-2.683,45.693,9.098)
O4: (-3.241,42.385,6.860)
O2: (-4.474,46.599,7.959)
C6: (-1.866,44.590,9.272)
C5: (-1.989,43.460,8.561)
O3': (-2.906,48.917,12.316)
Image (generated by PyMOL):