Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIM:A53:A51
Extra
PDB:
ATOM 1 O3' C A 52 -15.991 62.091 12.129 1.00 32.72 O
ATOM 2 P G A 53 -14.413 62.156 12.343 1.00 32.93 P
ATOM 3 OP1 G A 53 -14.164 61.952 13.792 1.00 32.66 O
ATOM 4 OP2 G A 53 -13.929 63.382 11.658 1.00 33.06 O
ATOM 5 O5' G A 53 -13.872 60.891 11.530 1.00 32.11 O
ATOM 6 C5' G A 53 -14.274 59.581 11.898 1.00 31.31 C
ATOM 7 C4' G A 53 -13.766 58.562 10.896 1.00 30.38 C
ATOM 8 O4' G A 53 -14.123 58.942 9.542 1.00 30.74 O
ATOM 9 C3' G A 53 -12.260 58.407 10.834 1.00 29.39 C
ATOM 10 O3' G A 53 -11.835 57.586 11.892 1.00 28.24 O
ATOM 11 C2' G A 53 -12.148 57.689 9.504 1.00 29.81 C
ATOM 12 O2' G A 53 -12.608 56.354 9.594 1.00 29.79 O
ATOM 13 C1' G A 53 -13.101 58.529 8.656 1.00 30.53 C
ATOM 14 N9 G A 53 -12.465 59.706 8.052 1.00 30.86 N
ATOM 15 C8 G A 53 -12.686 61.028 8.369 1.00 31.08 C
ATOM 16 N7 G A 53 -11.971 61.864 7.667 1.00 31.28 N
ATOM 17 C5 G A 53 -11.221 61.048 6.827 1.00 31.12 C
ATOM 18 C6 G A 53 -10.257 61.381 5.840 1.00 30.96 C
ATOM 19 O6 G A 53 -9.871 62.507 5.502 1.00 31.28 O
ATOM 20 N1 G A 53 -9.727 60.253 5.212 1.00 30.61 N
ATOM 21 C2 G A 53 -10.083 58.956 5.502 1.00 30.22 C
ATOM 22 N2 G A 53 -9.478 57.986 4.804 1.00 29.53 N
ATOM 23 N3 G A 53 -10.979 58.634 6.425 1.00 30.79 N
ATOM 24 C4 G A 53 -11.512 59.719 7.050 1.00 30.96 C
ATOM 25 P G A 54 -10.455 57.861 12.646 1.00 27.08 P
ATOM 26 OP1 G A 54 -10.317 56.824 13.692 1.00 27.12 O
ATOM 27 OP2 G A 54 -10.388 59.289 13.014 1.00 27.54 O
ATOM 28 O5' G A 54 -9.362 57.625 11.511 1.00 27.43 O
TER
ATOM 1 O3' A B 50 -17.946 56.262 7.813 1.00 32.64 O
ATOM 2 P U B 51 -18.635 57.338 6.838 1.00 34.23 P
ATOM 3 OP1 U B 51 -19.663 58.096 7.592 1.00 33.98 O
ATOM 4 OP2 U B 51 -19.043 56.652 5.593 1.00 34.13 O
ATOM 5 O5' U B 51 -17.407 58.310 6.506 1.00 34.47 O
ATOM 6 C5' U B 51 -16.921 59.197 7.517 1.00 35.04 C
ATOM 7 C4' U B 51 -16.360 60.486 6.941 1.00 35.14 C
ATOM 8 O4' U B 51 -15.055 60.205 6.382 1.00 35.62 O
ATOM 9 C3' U B 51 -17.194 61.165 5.841 1.00 35.17 C
ATOM 10 O3' U B 51 -17.720 62.493 6.182 1.00 34.69 O
ATOM 11 C2' U B 51 -16.332 61.076 4.571 1.00 35.44 C
ATOM 12 O2' U B 51 -16.286 62.266 3.809 1.00 36.38 O
ATOM 13 C1' U B 51 -14.934 60.730 5.077 1.00 35.75 C
ATOM 14 N1 U B 51 -14.218 59.717 4.227 1.00 36.23 N
ATOM 15 C2 U B 51 -13.035 60.070 3.594 1.00 36.33 C
ATOM 16 O2 U B 51 -12.521 61.173 3.679 1.00 36.56 O
ATOM 17 N3 U B 51 -12.463 59.066 2.842 1.00 36.04 N
ATOM 18 C4 U B 51 -12.942 57.777 2.662 1.00 35.65 C
ATOM 19 O4 U B 51 -12.321 56.995 1.955 1.00 35.31 O
ATOM 20 C5 U B 51 -14.175 57.479 3.349 1.00 35.89 C
ATOM 21 C6 U B 51 -14.749 58.440 4.089 1.00 36.25 C
ATOM 22 P C B 52 -16.924 63.774 6.750 1.00 34.15 P
ATOM 23 OP1 C B 52 -17.405 64.938 5.974 1.00 33.84 O
ATOM 24 OP2 C B 52 -15.467 63.504 6.812 1.00 34.49 O
ATOM 25 O5' C B 52 -17.495 63.913 8.241 1.00 33.48 O
TER
ATOM 2 P G A 53 -14.413 62.156 12.343 1.00 32.93 P
ATOM 3 OP1 G A 53 -14.164 61.952 13.792 1.00 32.66 O
ATOM 4 OP2 G A 53 -13.929 63.382 11.658 1.00 33.06 O
ATOM 5 O5' G A 53 -13.872 60.891 11.530 1.00 32.11 O
ATOM 6 C5' G A 53 -14.274 59.581 11.898 1.00 31.31 C
ATOM 7 C4' G A 53 -13.766 58.562 10.896 1.00 30.38 C
ATOM 8 O4' G A 53 -14.123 58.942 9.542 1.00 30.74 O
ATOM 9 C3' G A 53 -12.260 58.407 10.834 1.00 29.39 C
ATOM 10 O3' G A 53 -11.835 57.586 11.892 1.00 28.24 O
ATOM 11 C2' G A 53 -12.148 57.689 9.504 1.00 29.81 C
ATOM 12 O2' G A 53 -12.608 56.354 9.594 1.00 29.79 O
ATOM 13 C1' G A 53 -13.101 58.529 8.656 1.00 30.53 C
ATOM 14 N9 G A 53 -12.465 59.706 8.052 1.00 30.86 N
ATOM 15 C8 G A 53 -12.686 61.028 8.369 1.00 31.08 C
ATOM 16 N7 G A 53 -11.971 61.864 7.667 1.00 31.28 N
ATOM 17 C5 G A 53 -11.221 61.048 6.827 1.00 31.12 C
ATOM 18 C6 G A 53 -10.257 61.381 5.840 1.00 30.96 C
ATOM 19 O6 G A 53 -9.871 62.507 5.502 1.00 31.28 O
ATOM 20 N1 G A 53 -9.727 60.253 5.212 1.00 30.61 N
ATOM 21 C2 G A 53 -10.083 58.956 5.502 1.00 30.22 C
ATOM 22 N2 G A 53 -9.478 57.986 4.804 1.00 29.53 N
ATOM 23 N3 G A 53 -10.979 58.634 6.425 1.00 30.79 N
ATOM 24 C4 G A 53 -11.512 59.719 7.050 1.00 30.96 C
ATOM 25 P G A 54 -10.455 57.861 12.646 1.00 27.08 P
ATOM 26 OP1 G A 54 -10.317 56.824 13.692 1.00 27.12 O
ATOM 27 OP2 G A 54 -10.388 59.289 13.014 1.00 27.54 O
ATOM 28 O5' G A 54 -9.362 57.625 11.511 1.00 27.43 O
TER
ATOM 1 O3' A B 50 -17.946 56.262 7.813 1.00 32.64 O
ATOM 2 P U B 51 -18.635 57.338 6.838 1.00 34.23 P
ATOM 3 OP1 U B 51 -19.663 58.096 7.592 1.00 33.98 O
ATOM 4 OP2 U B 51 -19.043 56.652 5.593 1.00 34.13 O
ATOM 5 O5' U B 51 -17.407 58.310 6.506 1.00 34.47 O
ATOM 6 C5' U B 51 -16.921 59.197 7.517 1.00 35.04 C
ATOM 7 C4' U B 51 -16.360 60.486 6.941 1.00 35.14 C
ATOM 8 O4' U B 51 -15.055 60.205 6.382 1.00 35.62 O
ATOM 9 C3' U B 51 -17.194 61.165 5.841 1.00 35.17 C
ATOM 10 O3' U B 51 -17.720 62.493 6.182 1.00 34.69 O
ATOM 11 C2' U B 51 -16.332 61.076 4.571 1.00 35.44 C
ATOM 12 O2' U B 51 -16.286 62.266 3.809 1.00 36.38 O
ATOM 13 C1' U B 51 -14.934 60.730 5.077 1.00 35.75 C
ATOM 14 N1 U B 51 -14.218 59.717 4.227 1.00 36.23 N
ATOM 15 C2 U B 51 -13.035 60.070 3.594 1.00 36.33 C
ATOM 16 O2 U B 51 -12.521 61.173 3.679 1.00 36.56 O
ATOM 17 N3 U B 51 -12.463 59.066 2.842 1.00 36.04 N
ATOM 18 C4 U B 51 -12.942 57.777 2.662 1.00 35.65 C
ATOM 19 O4 U B 51 -12.321 56.995 1.955 1.00 35.31 O
ATOM 20 C5 U B 51 -14.175 57.479 3.349 1.00 35.89 C
ATOM 21 C6 U B 51 -14.749 58.440 4.089 1.00 36.25 C
ATOM 22 P C B 52 -16.924 63.774 6.750 1.00 34.15 P
ATOM 23 OP1 C B 52 -17.405 64.938 5.974 1.00 33.84 O
ATOM 24 OP2 C B 52 -15.467 63.504 6.812 1.00 34.49 O
ATOM 25 O5' C B 52 -17.495 63.913 8.241 1.00 33.48 O
TER
Atoms:
OP1: (-14.164,61.952,13.792)
OP2: (-13.929,63.382,11.658)
C3': (-12.260,58.407,10.834)
C1': (-13.101,58.529,8.656)
C5': (-14.274,59.581,11.898)
O6: (-9.871,62.507,5.502)
O4': (-14.123,58.942,9.542)
C8: (-12.686,61.028,8.369)
C2: (-10.083,58.956,5.502)
C6: (-10.257,61.381,5.840)
C5: (-11.221,61.048,6.827)
C4: (-11.512,59.719,7.050)
P: (-14.413,62.156,12.343)
C4': (-13.766,58.562,10.896)
C2': (-12.148,57.689,9.504)
O2': (-12.608,56.354,9.594)
N1: (-9.727,60.253,5.212)
N2: (-9.478,57.986,4.804)
N3: (-10.979,58.634,6.425)
N7: (-11.971,61.864,7.667)
N9: (-12.465,59.706,8.052)
O5': (-13.872,60.891,11.530)
O3': (-11.835,57.586,11.892)
OP2: (-13.929,63.382,11.658)
C3': (-12.260,58.407,10.834)
C1': (-13.101,58.529,8.656)
C5': (-14.274,59.581,11.898)
O6: (-9.871,62.507,5.502)
O4': (-14.123,58.942,9.542)
C8: (-12.686,61.028,8.369)
C2: (-10.083,58.956,5.502)
C6: (-10.257,61.381,5.840)
C5: (-11.221,61.048,6.827)
C4: (-11.512,59.719,7.050)
P: (-14.413,62.156,12.343)
C4': (-13.766,58.562,10.896)
C2': (-12.148,57.689,9.504)
O2': (-12.608,56.354,9.594)
N1: (-9.727,60.253,5.212)
N2: (-9.478,57.986,4.804)
N3: (-10.979,58.634,6.425)
N7: (-11.971,61.864,7.667)
N9: (-12.465,59.706,8.052)
O5': (-13.872,60.891,11.530)
O3': (-11.835,57.586,11.892)
C4: (-12.942,57.777,2.662)
N3: (-12.463,59.066,2.842)
OP1: (-19.663,58.096,7.592)
OP2: (-19.043,56.652,5.593)
C2: (-13.035,60.070,3.594)
C1': (-14.934,60.730,5.077)
C3': (-17.194,61.165,5.841)
O5': (-17.407,58.310,6.506)
O4': (-15.055,60.205,6.382)
C5': (-16.921,59.197,7.517)
P: (-18.635,57.338,6.838)
C4': (-16.360,60.486,6.941)
C2': (-16.332,61.076,4.571)
O2': (-16.286,62.266,3.809)
N1: (-14.218,59.717,4.227)
O4: (-12.321,56.995,1.955)
O2: (-12.521,61.173,3.679)
C6: (-14.749,58.440,4.089)
C5: (-14.175,57.479,3.349)
O3': (-17.720,62.493,6.182)
N3: (-12.463,59.066,2.842)
OP1: (-19.663,58.096,7.592)
OP2: (-19.043,56.652,5.593)
C2: (-13.035,60.070,3.594)
C1': (-14.934,60.730,5.077)
C3': (-17.194,61.165,5.841)
O5': (-17.407,58.310,6.506)
O4': (-15.055,60.205,6.382)
C5': (-16.921,59.197,7.517)
P: (-18.635,57.338,6.838)
C4': (-16.360,60.486,6.941)
C2': (-16.332,61.076,4.571)
O2': (-16.286,62.266,3.809)
N1: (-14.218,59.717,4.227)
O4: (-12.321,56.995,1.955)
O2: (-12.521,61.173,3.679)
C6: (-14.749,58.440,4.089)
C5: (-14.175,57.479,3.349)
O3': (-17.720,62.493,6.182)
Image (generated by PyMOL):