ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01030:01252

Extra

PDB:
ATOM 1 O3' A A1029 41.179 102.655 91.058 1.00 35.44 O
ATOM 2 P G A1030 40.555 102.987 89.626 1.00 38.89 P
ATOM 3 OP1 G A1030 41.263 102.142 88.623 1.00 36.90 O
ATOM 4 OP2 G A1030 40.510 104.460 89.447 1.00 38.30 O
ATOM 5 O5' G A1030 39.057 102.485 89.782 1.00 39.65 O
ATOM 6 C5' G A1030 38.017 102.960 88.916 1.00 37.41 C
ATOM 7 C4' G A1030 36.947 101.911 88.800 1.00 36.49 C
ATOM 8 O4' G A1030 37.487 100.761 88.092 1.00 37.22 O
ATOM 9 C3' G A1030 36.437 101.383 90.132 1.00 34.69 C
ATOM 10 O3' G A1030 35.063 101.070 89.985 1.00 34.78 O
ATOM 11 C2' G A1030 37.290 100.134 90.340 1.00 34.71 C
ATOM 12 O2' G A1030 36.670 99.174 91.162 1.00 35.08 O
ATOM 13 C1' G A1030 37.425 99.615 88.911 1.00 35.45 C
ATOM 14 N9 G A1030 38.628 98.831 88.654 1.00 36.43 N
ATOM 15 C8 G A1030 39.898 99.318 88.469 1.00 38.37 C
ATOM 16 N7 G A1030 40.773 98.382 88.224 1.00 39.45 N
ATOM 17 C5 G A1030 40.040 97.206 88.261 1.00 36.62 C
ATOM 18 C6 G A1030 40.450 95.873 88.067 1.00 37.80 C
ATOM 19 O6 G A1030 41.583 95.440 87.821 1.00 40.55 O
ATOM 20 N1 G A1030 39.386 94.993 88.177 1.00 35.16 N
ATOM 21 C2 G A1030 38.096 95.350 88.432 1.00 34.63 C
ATOM 22 N2 G A1030 37.204 94.349 88.474 1.00 34.71 N
ATOM 23 N3 G A1030 37.701 96.591 88.626 1.00 35.98 N
ATOM 24 C4 G A1030 38.717 97.463 88.525 1.00 35.83 C
ATOM 25 P G A1031 33.971 102.247 90.037 1.00 34.72 P
ATOM 26 OP1 G A1031 33.231 102.143 88.765 1.00 35.15 O
ATOM 27 OP2 G A1031 34.619 103.525 90.398 1.00 32.96 O
ATOM 28 O5' G A1031 33.026 101.838 91.249 1.00 35.77 O
TER

ATOM 1 O3' G B1251 32.585 101.740 84.752 1.00 36.70 O
ATOM 2 P U B1252 33.502 101.752 83.425 1.00 38.09 P
ATOM 3 OP1 U B1252 33.172 103.007 82.690 1.00 36.84 O
ATOM 4 OP2 U B1252 33.394 100.452 82.729 1.00 38.68 O
ATOM 5 O5' U B1252 34.991 101.885 83.979 1.00 37.73 O
ATOM 6 C5' U B1252 35.484 103.155 84.466 1.00 37.40 C
ATOM 7 C4' U B1252 36.978 103.105 84.631 1.00 36.31 C
ATOM 8 O4' U B1252 37.299 102.114 85.626 1.00 36.73 O
ATOM 9 C3' U B1252 37.739 102.661 83.395 1.00 36.92 C
ATOM 10 O3' U B1252 38.027 103.767 82.561 1.00 37.96 O
ATOM 11 C2' U B1252 39.016 102.075 83.969 1.00 36.34 C
ATOM 12 O2' U B1252 39.964 103.075 84.260 1.00 35.27 O
ATOM 13 C1' U B1252 38.503 101.455 85.270 1.00 36.92 C
ATOM 14 N1 U B1252 38.245 100.009 85.225 1.00 36.22 N
ATOM 15 C2 U B1252 39.309 99.163 84.948 1.00 36.30 C
ATOM 16 O2 U B1252 40.430 99.568 84.686 1.00 35.57 O
ATOM 17 N3 U B1252 39.004 97.826 84.980 1.00 35.18 N
ATOM 18 C4 U B1252 37.773 97.264 85.241 1.00 35.71 C
ATOM 19 O4 U B1252 37.664 96.047 85.278 1.00 36.05 O
ATOM 20 C5 U B1252 36.724 98.200 85.488 1.00 36.19 C
ATOM 21 C6 U B1252 36.987 99.506 85.469 1.00 36.12 C
ATOM 22 P A B1253 37.933 103.600 80.979 1.00 39.19 P
ATOM 23 OP1 A B1253 38.236 104.925 80.392 1.00 40.12 O
ATOM 24 OP2 A B1253 36.624 102.942 80.697 1.00 39.94 O
ATOM 25 O5' A B1253 39.123 102.602 80.623 1.00 36.22 O
TER

Atoms:
OP1: (41.263,102.142,88.623)
OP2: (40.510,104.460,89.447)
C3': (36.437,101.383,90.132)
C1': (37.425,99.615,88.911)
C5': (38.017,102.960,88.916)
O6: (41.583,95.440,87.821)
O4': (37.487,100.761,88.092)
C8: (39.898,99.318,88.469)
C2: (38.096,95.350,88.432)
C6: (40.450,95.873,88.067)
C5: (40.040,97.206,88.261)
C4: (38.717,97.463,88.525)
P: (40.555,102.987,89.626)
C4': (36.947,101.911,88.800)
C2': (37.290,100.134,90.340)
O2': (36.670,99.174,91.162)
N1: (39.386,94.993,88.177)
N2: (37.204,94.349,88.474)
N3: (37.701,96.591,88.626)
N7: (40.773,98.382,88.224)
N9: (38.628,98.831,88.654)
O5': (39.057,102.485,89.782)
O3': (35.063,101.070,89.985)
C4: (37.773,97.264,85.241)
N3: (39.004,97.826,84.980)
OP1: (33.172,103.007,82.690)
OP2: (33.394,100.452,82.729)
C2: (39.309,99.163,84.948)
C1': (38.503,101.455,85.270)
C3': (37.739,102.661,83.395)
O5': (34.991,101.885,83.979)
O4': (37.299,102.114,85.626)
C5': (35.484,103.155,84.466)
P: (33.502,101.752,83.425)
C4': (36.978,103.105,84.631)
C2': (39.016,102.075,83.969)
O2': (39.964,103.075,84.260)
N1: (38.245,100.009,85.225)
O4: (37.664,96.047,85.278)
O2: (40.430,99.568,84.686)
C6: (36.987,99.506,85.469)
C5: (36.724,98.200,85.488)
O3': (38.027,103.767,82.561)
Image (generated by PyMOL):
PyMOL image
show in jmol