Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B18:B25
Extra
PDB:
ATOM 1 O3' U A 17 -13.556 -6.568 -5.089 1.00 61.07 O
ATOM 2 P G A 18 -12.990 -8.072 -5.065 1.00 64.44 P
ATOM 3 OP1 G A 18 -12.185 -8.245 -6.301 1.00 64.33 O
ATOM 4 OP2 G A 18 -14.162 -8.954 -4.834 1.00 60.77 O
ATOM 5 O5' G A 18 -12.046 -8.065 -3.784 1.00 61.72 O
ATOM 6 C5' G A 18 -10.848 -7.289 -3.746 1.00 61.26 C
ATOM 7 C4' G A 18 -10.243 -7.348 -2.370 1.00 61.16 C
ATOM 8 O4' G A 18 -11.218 -6.873 -1.410 1.00 59.86 O
ATOM 9 C3' G A 18 -9.872 -8.737 -1.873 1.00 61.07 C
ATOM 10 O3' G A 18 -8.607 -9.170 -2.345 1.00 61.68 O
ATOM 11 C2' G A 18 -9.945 -8.573 -0.358 1.00 59.79 C
ATOM 12 O2' G A 18 -8.787 -7.894 0.109 1.00 59.99 O
ATOM 13 C1' G A 18 -11.134 -7.624 -0.220 1.00 58.68 C
ATOM 14 N9 G A 18 -12.412 -8.348 -0.060 1.00 57.74 N
ATOM 15 C8 G A 18 -13.386 -8.510 -1.016 1.00 58.27 C
ATOM 16 N7 G A 18 -14.413 -9.193 -0.590 1.00 57.64 N
ATOM 17 C5 G A 18 -14.100 -9.499 0.727 1.00 56.91 C
ATOM 18 C6 G A 18 -14.834 -10.227 1.702 1.00 55.89 C
ATOM 19 O6 G A 18 -15.944 -10.763 1.593 1.00 55.05 O
ATOM 20 N1 G A 18 -14.144 -10.299 2.907 1.00 54.78 N
ATOM 21 C2 G A 18 -12.910 -9.745 3.144 1.00 55.32 C
ATOM 22 N2 G A 18 -12.409 -9.923 4.373 1.00 54.30 N
ATOM 23 N3 G A 18 -12.215 -9.064 2.247 1.00 56.15 N
ATOM 24 C4 G A 18 -12.867 -8.981 1.070 1.00 56.89 C
ATOM 25 P A A 19 -8.422 -10.631 -2.993 1.00 63.41 P
ATOM 26 OP1 A A 19 -7.143 -11.159 -2.457 1.00 62.75 O
ATOM 27 OP2 A A 19 -8.572 -10.466 -4.461 1.00 62.31 O
ATOM 28 O5' A A 19 -9.654 -11.459 -2.417 1.00 59.40 O
TER
ATOM 1 O3' G B 24 -14.377 -10.104 7.802 1.00 48.59 O
ATOM 2 P U B 25 -14.608 -8.893 8.832 1.00 49.80 P
ATOM 3 OP1 U B 25 -14.028 -9.313 10.132 1.00 49.62 O
ATOM 4 OP2 U B 25 -16.052 -8.559 8.749 1.00 48.52 O
ATOM 5 O5' U B 25 -13.732 -7.725 8.196 1.00 52.24 O
ATOM 6 C5' U B 25 -12.340 -7.591 8.481 1.00 51.91 C
ATOM 7 C4' U B 25 -11.671 -6.841 7.360 1.00 53.00 C
ATOM 8 O4' U B 25 -11.891 -7.562 6.123 1.00 53.22 O
ATOM 9 C3' U B 25 -12.203 -5.445 7.082 1.00 55.05 C
ATOM 10 O3' U B 25 -11.637 -4.477 7.946 1.00 55.72 O
ATOM 11 C2' U B 25 -11.852 -5.249 5.609 1.00 54.58 C
ATOM 12 O2' U B 25 -10.472 -4.942 5.479 1.00 53.65 O
ATOM 13 C1' U B 25 -12.064 -6.657 5.055 1.00 53.85 C
ATOM 14 N1 U B 25 -13.402 -6.896 4.472 1.00 54.27 N
ATOM 15 C2 U B 25 -13.656 -6.405 3.207 1.00 55.65 C
ATOM 16 O2 U B 25 -12.833 -5.775 2.565 1.00 56.56 O
ATOM 17 N3 U B 25 -14.914 -6.672 2.724 1.00 55.69 N
ATOM 18 C4 U B 25 -15.920 -7.371 3.363 1.00 55.13 C
ATOM 19 O4 U B 25 -17.003 -7.531 2.798 1.00 54.94 O
ATOM 20 C5 U B 25 -15.574 -7.851 4.665 1.00 54.05 C
ATOM 21 C6 U B 25 -14.357 -7.605 5.160 1.00 53.65 C
ATOM 22 P U B 26 -12.468 -3.162 8.352 1.00 57.85 P
ATOM 23 OP1 U B 26 -11.595 -2.371 9.256 1.00 55.52 O
ATOM 24 OP2 U B 26 -13.785 -3.634 8.851 1.00 57.18 O
ATOM 25 O5' U B 26 -12.641 -2.415 6.956 1.00 57.02 O
TER
ATOM 2 P G A 18 -12.990 -8.072 -5.065 1.00 64.44 P
ATOM 3 OP1 G A 18 -12.185 -8.245 -6.301 1.00 64.33 O
ATOM 4 OP2 G A 18 -14.162 -8.954 -4.834 1.00 60.77 O
ATOM 5 O5' G A 18 -12.046 -8.065 -3.784 1.00 61.72 O
ATOM 6 C5' G A 18 -10.848 -7.289 -3.746 1.00 61.26 C
ATOM 7 C4' G A 18 -10.243 -7.348 -2.370 1.00 61.16 C
ATOM 8 O4' G A 18 -11.218 -6.873 -1.410 1.00 59.86 O
ATOM 9 C3' G A 18 -9.872 -8.737 -1.873 1.00 61.07 C
ATOM 10 O3' G A 18 -8.607 -9.170 -2.345 1.00 61.68 O
ATOM 11 C2' G A 18 -9.945 -8.573 -0.358 1.00 59.79 C
ATOM 12 O2' G A 18 -8.787 -7.894 0.109 1.00 59.99 O
ATOM 13 C1' G A 18 -11.134 -7.624 -0.220 1.00 58.68 C
ATOM 14 N9 G A 18 -12.412 -8.348 -0.060 1.00 57.74 N
ATOM 15 C8 G A 18 -13.386 -8.510 -1.016 1.00 58.27 C
ATOM 16 N7 G A 18 -14.413 -9.193 -0.590 1.00 57.64 N
ATOM 17 C5 G A 18 -14.100 -9.499 0.727 1.00 56.91 C
ATOM 18 C6 G A 18 -14.834 -10.227 1.702 1.00 55.89 C
ATOM 19 O6 G A 18 -15.944 -10.763 1.593 1.00 55.05 O
ATOM 20 N1 G A 18 -14.144 -10.299 2.907 1.00 54.78 N
ATOM 21 C2 G A 18 -12.910 -9.745 3.144 1.00 55.32 C
ATOM 22 N2 G A 18 -12.409 -9.923 4.373 1.00 54.30 N
ATOM 23 N3 G A 18 -12.215 -9.064 2.247 1.00 56.15 N
ATOM 24 C4 G A 18 -12.867 -8.981 1.070 1.00 56.89 C
ATOM 25 P A A 19 -8.422 -10.631 -2.993 1.00 63.41 P
ATOM 26 OP1 A A 19 -7.143 -11.159 -2.457 1.00 62.75 O
ATOM 27 OP2 A A 19 -8.572 -10.466 -4.461 1.00 62.31 O
ATOM 28 O5' A A 19 -9.654 -11.459 -2.417 1.00 59.40 O
TER
ATOM 1 O3' G B 24 -14.377 -10.104 7.802 1.00 48.59 O
ATOM 2 P U B 25 -14.608 -8.893 8.832 1.00 49.80 P
ATOM 3 OP1 U B 25 -14.028 -9.313 10.132 1.00 49.62 O
ATOM 4 OP2 U B 25 -16.052 -8.559 8.749 1.00 48.52 O
ATOM 5 O5' U B 25 -13.732 -7.725 8.196 1.00 52.24 O
ATOM 6 C5' U B 25 -12.340 -7.591 8.481 1.00 51.91 C
ATOM 7 C4' U B 25 -11.671 -6.841 7.360 1.00 53.00 C
ATOM 8 O4' U B 25 -11.891 -7.562 6.123 1.00 53.22 O
ATOM 9 C3' U B 25 -12.203 -5.445 7.082 1.00 55.05 C
ATOM 10 O3' U B 25 -11.637 -4.477 7.946 1.00 55.72 O
ATOM 11 C2' U B 25 -11.852 -5.249 5.609 1.00 54.58 C
ATOM 12 O2' U B 25 -10.472 -4.942 5.479 1.00 53.65 O
ATOM 13 C1' U B 25 -12.064 -6.657 5.055 1.00 53.85 C
ATOM 14 N1 U B 25 -13.402 -6.896 4.472 1.00 54.27 N
ATOM 15 C2 U B 25 -13.656 -6.405 3.207 1.00 55.65 C
ATOM 16 O2 U B 25 -12.833 -5.775 2.565 1.00 56.56 O
ATOM 17 N3 U B 25 -14.914 -6.672 2.724 1.00 55.69 N
ATOM 18 C4 U B 25 -15.920 -7.371 3.363 1.00 55.13 C
ATOM 19 O4 U B 25 -17.003 -7.531 2.798 1.00 54.94 O
ATOM 20 C5 U B 25 -15.574 -7.851 4.665 1.00 54.05 C
ATOM 21 C6 U B 25 -14.357 -7.605 5.160 1.00 53.65 C
ATOM 22 P U B 26 -12.468 -3.162 8.352 1.00 57.85 P
ATOM 23 OP1 U B 26 -11.595 -2.371 9.256 1.00 55.52 O
ATOM 24 OP2 U B 26 -13.785 -3.634 8.851 1.00 57.18 O
ATOM 25 O5' U B 26 -12.641 -2.415 6.956 1.00 57.02 O
TER
Atoms:
OP1: (-12.185,-8.245,-6.301)
OP2: (-14.162,-8.954,-4.834)
C3': (-9.872,-8.737,-1.873)
C1': (-11.134,-7.624,-0.220)
C5': (-10.848,-7.289,-3.746)
O6: (-15.944,-10.763,1.593)
O4': (-11.218,-6.873,-1.410)
C8: (-13.386,-8.510,-1.016)
C2: (-12.910,-9.745,3.144)
C6: (-14.834,-10.227,1.702)
C5: (-14.100,-9.499,0.727)
C4: (-12.867,-8.981,1.070)
P: (-12.990,-8.072,-5.065)
C4': (-10.243,-7.348,-2.370)
C2': (-9.945,-8.573,-0.358)
O2': (-8.787,-7.894,0.109)
N1: (-14.144,-10.299,2.907)
N2: (-12.409,-9.923,4.373)
N3: (-12.215,-9.064,2.247)
N7: (-14.413,-9.193,-0.590)
N9: (-12.412,-8.348,-0.060)
O5': (-12.046,-8.065,-3.784)
O3': (-8.607,-9.170,-2.345)
OP2: (-14.162,-8.954,-4.834)
C3': (-9.872,-8.737,-1.873)
C1': (-11.134,-7.624,-0.220)
C5': (-10.848,-7.289,-3.746)
O6: (-15.944,-10.763,1.593)
O4': (-11.218,-6.873,-1.410)
C8: (-13.386,-8.510,-1.016)
C2: (-12.910,-9.745,3.144)
C6: (-14.834,-10.227,1.702)
C5: (-14.100,-9.499,0.727)
C4: (-12.867,-8.981,1.070)
P: (-12.990,-8.072,-5.065)
C4': (-10.243,-7.348,-2.370)
C2': (-9.945,-8.573,-0.358)
O2': (-8.787,-7.894,0.109)
N1: (-14.144,-10.299,2.907)
N2: (-12.409,-9.923,4.373)
N3: (-12.215,-9.064,2.247)
N7: (-14.413,-9.193,-0.590)
N9: (-12.412,-8.348,-0.060)
O5': (-12.046,-8.065,-3.784)
O3': (-8.607,-9.170,-2.345)
C4: (-15.920,-7.371,3.363)
N3: (-14.914,-6.672,2.724)
OP1: (-14.028,-9.313,10.132)
OP2: (-16.052,-8.559,8.749)
C2: (-13.656,-6.405,3.207)
C1': (-12.064,-6.657,5.055)
C3': (-12.203,-5.445,7.082)
O5': (-13.732,-7.725,8.196)
O4': (-11.891,-7.562,6.123)
C5': (-12.340,-7.591,8.481)
P: (-14.608,-8.893,8.832)
C4': (-11.671,-6.841,7.360)
C2': (-11.852,-5.249,5.609)
O2': (-10.472,-4.942,5.479)
N1: (-13.402,-6.896,4.472)
O4: (-17.003,-7.531,2.798)
O2: (-12.833,-5.775,2.565)
C6: (-14.357,-7.605,5.160)
C5: (-15.574,-7.851,4.665)
O3': (-11.637,-4.477,7.946)
N3: (-14.914,-6.672,2.724)
OP1: (-14.028,-9.313,10.132)
OP2: (-16.052,-8.559,8.749)
C2: (-13.656,-6.405,3.207)
C1': (-12.064,-6.657,5.055)
C3': (-12.203,-5.445,7.082)
O5': (-13.732,-7.725,8.196)
O4': (-11.891,-7.562,6.123)
C5': (-12.340,-7.591,8.481)
P: (-14.608,-8.893,8.832)
C4': (-11.671,-6.841,7.360)
C2': (-11.852,-5.249,5.609)
O2': (-10.472,-4.942,5.479)
N1: (-13.402,-6.896,4.472)
O4: (-17.003,-7.531,2.798)
O2: (-12.833,-5.775,2.565)
C6: (-14.357,-7.605,5.160)
C5: (-15.574,-7.851,4.665)
O3': (-11.637,-4.477,7.946)
Image (generated by PyMOL):