Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A42:A93
Extra
PDB:
ATOM 1 O3' A A 41 -1.564 51.743 6.577 1.00 43.45 O
ATOM 2 P G A 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 3 OP1 G A 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 4 OP2 G A 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 5 O5' G A 42 0.713 50.838 6.932 1.00 43.00 O
ATOM 6 C5' G A 42 0.883 51.024 8.333 1.00 43.49 C
ATOM 7 C4' G A 42 1.097 49.687 9.028 1.00 43.38 C
ATOM 8 O4' G A 42 -0.037 48.806 8.782 1.00 43.60 O
ATOM 9 C3' G A 42 2.341 48.920 8.591 1.00 42.92 C
ATOM 10 O3' G A 42 2.888 48.253 9.719 1.00 42.27 O
ATOM 11 C2' G A 42 1.773 47.964 7.539 1.00 43.26 C
ATOM 12 O2' G A 42 2.510 46.769 7.355 1.00 44.20 O
ATOM 13 C1' G A 42 0.374 47.658 8.066 1.00 43.31 C
ATOM 14 N9 G A 42 -0.513 47.451 6.936 1.00 43.19 N
ATOM 15 C8 G A 42 -1.286 48.390 6.293 1.00 43.25 C
ATOM 16 N7 G A 42 -1.957 47.907 5.285 1.00 43.21 N
ATOM 17 C5 G A 42 -1.594 46.565 5.254 1.00 43.62 C
ATOM 18 C6 G A 42 -1.994 45.524 4.374 1.00 43.89 C
ATOM 19 O6 G A 42 -2.779 45.587 3.414 1.00 43.84 O
ATOM 20 N1 G A 42 -1.389 44.308 4.696 1.00 43.66 N
ATOM 21 C2 G A 42 -0.506 44.126 5.735 1.00 43.28 C
ATOM 22 N2 G A 42 -0.021 42.890 5.885 1.00 43.03 N
ATOM 23 N3 G A 42 -0.119 45.088 6.561 1.00 43.36 N
ATOM 24 C4 G A 42 -0.702 46.274 6.263 1.00 43.25 C
ATOM 25 P G A 43 4.445 47.933 9.854 1.00 41.59 P
ATOM 26 OP1 G A 43 4.517 46.547 10.352 1.00 41.71 O
ATOM 27 OP2 G A 43 5.099 49.015 10.619 1.00 41.68 O
ATOM 28 O5' G A 43 4.984 47.981 8.349 1.00 42.79 O
TER
ATOM 1 O3' U B 92 0.519 43.741 13.703 1.00 44.94 O
ATOM 2 P U B 93 -0.934 44.394 13.832 1.00 44.72 P
ATOM 3 OP1 U B 93 -0.855 45.330 14.974 1.00 45.04 O
ATOM 4 OP2 U B 93 -1.984 43.354 13.788 1.00 43.95 O
ATOM 5 O5' U B 93 -1.052 45.208 12.462 1.00 45.37 O
ATOM 6 C5' U B 93 -0.588 46.549 12.336 1.00 45.66 C
ATOM 7 C4' U B 93 -1.608 47.366 11.562 1.00 46.23 C
ATOM 8 O4' U B 93 -1.771 46.826 10.222 1.00 47.16 O
ATOM 9 C3' U B 93 -3.003 47.396 12.177 1.00 45.96 C
ATOM 10 O3' U B 93 -3.490 48.719 12.157 1.00 45.02 O
ATOM 11 C2' U B 93 -3.830 46.482 11.278 1.00 46.39 C
ATOM 12 O2' U B 93 -5.183 46.871 11.195 1.00 46.68 O
ATOM 13 C1' U B 93 -3.139 46.637 9.928 1.00 46.93 C
ATOM 14 N1 U B 93 -3.299 45.418 9.085 1.00 47.38 N
ATOM 15 C2 U B 93 -4.164 45.426 8.002 1.00 47.80 C
ATOM 16 O2 U B 93 -4.826 46.389 7.657 1.00 48.47 O
ATOM 17 N3 U B 93 -4.239 44.241 7.310 1.00 47.42 N
ATOM 18 C4 U B 93 -3.557 43.073 7.587 1.00 47.17 C
ATOM 19 O4 U B 93 -3.735 42.095 6.877 1.00 47.21 O
ATOM 20 C5 U B 93 -2.677 43.127 8.728 1.00 47.77 C
ATOM 21 C6 U B 93 -2.586 44.274 9.418 1.00 47.99 C
ATOM 22 P C B 94 -4.364 49.241 13.380 1.00 44.80 P
ATOM 23 OP1 C B 94 -4.321 50.718 13.372 1.00 44.48 O
ATOM 24 OP2 C B 94 -3.962 48.498 14.600 1.00 44.74 O
ATOM 25 O5' C B 94 -5.829 48.772 12.946 1.00 44.49 O
TER
ATOM 2 P G A 42 -0.056 51.937 6.082 1.00 43.32 P
ATOM 3 OP1 G A 42 0.421 53.265 6.523 1.00 44.19 O
ATOM 4 OP2 G A 42 -0.001 51.579 4.647 1.00 43.70 O
ATOM 5 O5' G A 42 0.713 50.838 6.932 1.00 43.00 O
ATOM 6 C5' G A 42 0.883 51.024 8.333 1.00 43.49 C
ATOM 7 C4' G A 42 1.097 49.687 9.028 1.00 43.38 C
ATOM 8 O4' G A 42 -0.037 48.806 8.782 1.00 43.60 O
ATOM 9 C3' G A 42 2.341 48.920 8.591 1.00 42.92 C
ATOM 10 O3' G A 42 2.888 48.253 9.719 1.00 42.27 O
ATOM 11 C2' G A 42 1.773 47.964 7.539 1.00 43.26 C
ATOM 12 O2' G A 42 2.510 46.769 7.355 1.00 44.20 O
ATOM 13 C1' G A 42 0.374 47.658 8.066 1.00 43.31 C
ATOM 14 N9 G A 42 -0.513 47.451 6.936 1.00 43.19 N
ATOM 15 C8 G A 42 -1.286 48.390 6.293 1.00 43.25 C
ATOM 16 N7 G A 42 -1.957 47.907 5.285 1.00 43.21 N
ATOM 17 C5 G A 42 -1.594 46.565 5.254 1.00 43.62 C
ATOM 18 C6 G A 42 -1.994 45.524 4.374 1.00 43.89 C
ATOM 19 O6 G A 42 -2.779 45.587 3.414 1.00 43.84 O
ATOM 20 N1 G A 42 -1.389 44.308 4.696 1.00 43.66 N
ATOM 21 C2 G A 42 -0.506 44.126 5.735 1.00 43.28 C
ATOM 22 N2 G A 42 -0.021 42.890 5.885 1.00 43.03 N
ATOM 23 N3 G A 42 -0.119 45.088 6.561 1.00 43.36 N
ATOM 24 C4 G A 42 -0.702 46.274 6.263 1.00 43.25 C
ATOM 25 P G A 43 4.445 47.933 9.854 1.00 41.59 P
ATOM 26 OP1 G A 43 4.517 46.547 10.352 1.00 41.71 O
ATOM 27 OP2 G A 43 5.099 49.015 10.619 1.00 41.68 O
ATOM 28 O5' G A 43 4.984 47.981 8.349 1.00 42.79 O
TER
ATOM 1 O3' U B 92 0.519 43.741 13.703 1.00 44.94 O
ATOM 2 P U B 93 -0.934 44.394 13.832 1.00 44.72 P
ATOM 3 OP1 U B 93 -0.855 45.330 14.974 1.00 45.04 O
ATOM 4 OP2 U B 93 -1.984 43.354 13.788 1.00 43.95 O
ATOM 5 O5' U B 93 -1.052 45.208 12.462 1.00 45.37 O
ATOM 6 C5' U B 93 -0.588 46.549 12.336 1.00 45.66 C
ATOM 7 C4' U B 93 -1.608 47.366 11.562 1.00 46.23 C
ATOM 8 O4' U B 93 -1.771 46.826 10.222 1.00 47.16 O
ATOM 9 C3' U B 93 -3.003 47.396 12.177 1.00 45.96 C
ATOM 10 O3' U B 93 -3.490 48.719 12.157 1.00 45.02 O
ATOM 11 C2' U B 93 -3.830 46.482 11.278 1.00 46.39 C
ATOM 12 O2' U B 93 -5.183 46.871 11.195 1.00 46.68 O
ATOM 13 C1' U B 93 -3.139 46.637 9.928 1.00 46.93 C
ATOM 14 N1 U B 93 -3.299 45.418 9.085 1.00 47.38 N
ATOM 15 C2 U B 93 -4.164 45.426 8.002 1.00 47.80 C
ATOM 16 O2 U B 93 -4.826 46.389 7.657 1.00 48.47 O
ATOM 17 N3 U B 93 -4.239 44.241 7.310 1.00 47.42 N
ATOM 18 C4 U B 93 -3.557 43.073 7.587 1.00 47.17 C
ATOM 19 O4 U B 93 -3.735 42.095 6.877 1.00 47.21 O
ATOM 20 C5 U B 93 -2.677 43.127 8.728 1.00 47.77 C
ATOM 21 C6 U B 93 -2.586 44.274 9.418 1.00 47.99 C
ATOM 22 P C B 94 -4.364 49.241 13.380 1.00 44.80 P
ATOM 23 OP1 C B 94 -4.321 50.718 13.372 1.00 44.48 O
ATOM 24 OP2 C B 94 -3.962 48.498 14.600 1.00 44.74 O
ATOM 25 O5' C B 94 -5.829 48.772 12.946 1.00 44.49 O
TER
Atoms:
OP1: (0.421,53.265,6.523)
OP2: (-0.001,51.579,4.647)
C3': (2.341,48.920,8.591)
C1': (0.374,47.658,8.066)
C5': (0.883,51.024,8.333)
O6: (-2.779,45.587,3.414)
O4': (-0.037,48.806,8.782)
C8: (-1.286,48.390,6.293)
C2: (-0.506,44.126,5.735)
C6: (-1.994,45.524,4.374)
C5: (-1.594,46.565,5.254)
C4: (-0.702,46.274,6.263)
P: (-0.056,51.937,6.082)
C4': (1.097,49.687,9.028)
C2': (1.773,47.964,7.539)
O2': (2.510,46.769,7.355)
N1: (-1.389,44.308,4.696)
N2: (-0.021,42.890,5.885)
N3: (-0.119,45.088,6.561)
N7: (-1.957,47.907,5.285)
N9: (-0.513,47.451,6.936)
O5': (0.713,50.838,6.932)
O3': (2.888,48.253,9.719)
OP2: (-0.001,51.579,4.647)
C3': (2.341,48.920,8.591)
C1': (0.374,47.658,8.066)
C5': (0.883,51.024,8.333)
O6: (-2.779,45.587,3.414)
O4': (-0.037,48.806,8.782)
C8: (-1.286,48.390,6.293)
C2: (-0.506,44.126,5.735)
C6: (-1.994,45.524,4.374)
C5: (-1.594,46.565,5.254)
C4: (-0.702,46.274,6.263)
P: (-0.056,51.937,6.082)
C4': (1.097,49.687,9.028)
C2': (1.773,47.964,7.539)
O2': (2.510,46.769,7.355)
N1: (-1.389,44.308,4.696)
N2: (-0.021,42.890,5.885)
N3: (-0.119,45.088,6.561)
N7: (-1.957,47.907,5.285)
N9: (-0.513,47.451,6.936)
O5': (0.713,50.838,6.932)
O3': (2.888,48.253,9.719)
C4: (-3.557,43.073,7.587)
N3: (-4.239,44.241,7.310)
OP1: (-0.855,45.330,14.974)
OP2: (-1.984,43.354,13.788)
C2: (-4.164,45.426,8.002)
C1': (-3.139,46.637,9.928)
C3': (-3.003,47.396,12.177)
O5': (-1.052,45.208,12.462)
O4': (-1.771,46.826,10.222)
C5': (-0.588,46.549,12.336)
P: (-0.934,44.394,13.832)
C4': (-1.608,47.366,11.562)
C2': (-3.830,46.482,11.278)
O2': (-5.183,46.871,11.195)
N1: (-3.299,45.418,9.085)
O4: (-3.735,42.095,6.877)
O2: (-4.826,46.389,7.657)
C6: (-2.586,44.274,9.418)
C5: (-2.677,43.127,8.728)
O3': (-3.490,48.719,12.157)
N3: (-4.239,44.241,7.310)
OP1: (-0.855,45.330,14.974)
OP2: (-1.984,43.354,13.788)
C2: (-4.164,45.426,8.002)
C1': (-3.139,46.637,9.928)
C3': (-3.003,47.396,12.177)
O5': (-1.052,45.208,12.462)
O4': (-1.771,46.826,10.222)
C5': (-0.588,46.549,12.336)
P: (-0.934,44.394,13.832)
C4': (-1.608,47.366,11.562)
C2': (-3.830,46.482,11.278)
O2': (-5.183,46.871,11.195)
N1: (-3.299,45.418,9.085)
O4: (-3.735,42.095,6.877)
O2: (-4.826,46.389,7.657)
C6: (-2.586,44.274,9.418)
C5: (-2.677,43.127,8.728)
O3': (-3.490,48.719,12.157)
Image (generated by PyMOL):