Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A53:A51
Extra
PDB:
ATOM 1 O3' C A 52 -16.223 61.879 12.437 1.00 42.80 O
ATOM 2 P G A 53 -14.644 61.926 12.647 1.00 43.03 P
ATOM 3 OP1 G A 53 -14.380 61.630 14.076 1.00 42.62 O
ATOM 4 OP2 G A 53 -14.151 63.187 12.034 1.00 43.06 O
ATOM 5 O5' G A 53 -14.131 60.707 11.741 1.00 42.40 O
ATOM 6 C5' G A 53 -14.484 59.357 12.053 1.00 41.20 C
ATOM 7 C4' G A 53 -14.043 58.395 10.963 1.00 40.01 C
ATOM 8 O4' G A 53 -14.437 58.870 9.646 1.00 40.05 O
ATOM 9 C3' G A 53 -12.541 58.196 10.844 1.00 38.97 C
ATOM 10 O3' G A 53 -12.084 57.297 11.827 1.00 38.33 O
ATOM 11 C2' G A 53 -12.463 57.586 9.455 1.00 39.07 C
ATOM 12 O2' G A 53 -12.859 56.226 9.438 1.00 38.49 O
ATOM 13 C1' G A 53 -13.452 58.481 8.699 1.00 39.69 C
ATOM 14 N9 G A 53 -12.807 59.676 8.144 1.00 39.49 N
ATOM 15 C8 G A 53 -13.064 60.983 8.488 1.00 39.12 C
ATOM 16 N7 G A 53 -12.328 61.846 7.848 1.00 39.50 N
ATOM 17 C5 G A 53 -11.526 61.067 7.023 1.00 39.65 C
ATOM 18 C6 G A 53 -10.522 61.446 6.094 1.00 39.71 C
ATOM 19 O6 G A 53 -10.142 62.589 5.809 1.00 40.14 O
ATOM 20 N1 G A 53 -9.937 60.349 5.457 1.00 39.57 N
ATOM 21 C2 G A 53 -10.277 59.037 5.687 1.00 39.10 C
ATOM 22 N2 G A 53 -9.611 58.110 4.984 1.00 38.30 N
ATOM 23 N3 G A 53 -11.212 58.670 6.557 1.00 39.76 N
ATOM 24 C4 G A 53 -11.802 59.727 7.192 1.00 39.72 C
ATOM 25 P G A 54 -10.785 57.643 12.691 1.00 38.00 P
ATOM 26 OP1 G A 54 -10.683 56.616 13.747 1.00 38.18 O
ATOM 27 OP2 G A 54 -10.827 59.076 13.061 1.00 38.53 O
ATOM 28 O5' G A 54 -9.579 57.443 11.666 1.00 38.18 O
TER
ATOM 1 O3' A B 50 -18.266 56.096 7.883 1.00 42.86 O
ATOM 2 P U B 51 -18.904 57.228 6.949 1.00 43.40 P
ATOM 3 OP1 U B 51 -19.859 58.008 7.769 1.00 43.44 O
ATOM 4 OP2 U B 51 -19.367 56.600 5.692 1.00 43.16 O
ATOM 5 O5' U B 51 -17.638 58.135 6.598 1.00 43.58 O
ATOM 6 C5' U B 51 -17.126 59.029 7.572 1.00 44.32 C
ATOM 7 C4' U B 51 -16.626 60.306 6.925 1.00 44.73 C
ATOM 8 O4' U B 51 -15.320 60.060 6.353 1.00 45.36 O
ATOM 9 C3' U B 51 -17.509 60.892 5.817 1.00 44.86 C
ATOM 10 O3' U B 51 -17.951 62.260 6.039 1.00 44.61 O
ATOM 11 C2' U B 51 -16.706 60.667 4.525 1.00 45.19 C
ATOM 12 O2' U B 51 -16.769 61.733 3.599 1.00 45.67 O
ATOM 13 C1' U B 51 -15.269 60.468 5.002 1.00 45.60 C
ATOM 14 N1 U B 51 -14.518 59.415 4.231 1.00 46.09 N
ATOM 15 C2 U B 51 -13.246 59.678 3.740 1.00 46.02 C
ATOM 16 O2 U B 51 -12.658 60.736 3.883 1.00 46.10 O
ATOM 17 N3 U B 51 -12.670 58.635 3.053 1.00 45.72 N
ATOM 18 C4 U B 51 -13.223 57.389 2.815 1.00 45.74 C
ATOM 19 O4 U B 51 -12.590 56.560 2.179 1.00 45.98 O
ATOM 20 C5 U B 51 -14.541 57.182 3.353 1.00 45.83 C
ATOM 21 C6 U B 51 -15.121 58.181 4.028 1.00 46.10 C
ATOM 22 P C B 52 -17.207 63.406 6.890 1.00 44.30 P
ATOM 23 OP1 C B 52 -17.969 64.648 6.634 1.00 44.32 O
ATOM 24 OP2 C B 52 -15.752 63.373 6.618 1.00 44.05 O
ATOM 25 O5' C B 52 -17.460 63.029 8.421 1.00 43.71 O
TER
ATOM 2 P G A 53 -14.644 61.926 12.647 1.00 43.03 P
ATOM 3 OP1 G A 53 -14.380 61.630 14.076 1.00 42.62 O
ATOM 4 OP2 G A 53 -14.151 63.187 12.034 1.00 43.06 O
ATOM 5 O5' G A 53 -14.131 60.707 11.741 1.00 42.40 O
ATOM 6 C5' G A 53 -14.484 59.357 12.053 1.00 41.20 C
ATOM 7 C4' G A 53 -14.043 58.395 10.963 1.00 40.01 C
ATOM 8 O4' G A 53 -14.437 58.870 9.646 1.00 40.05 O
ATOM 9 C3' G A 53 -12.541 58.196 10.844 1.00 38.97 C
ATOM 10 O3' G A 53 -12.084 57.297 11.827 1.00 38.33 O
ATOM 11 C2' G A 53 -12.463 57.586 9.455 1.00 39.07 C
ATOM 12 O2' G A 53 -12.859 56.226 9.438 1.00 38.49 O
ATOM 13 C1' G A 53 -13.452 58.481 8.699 1.00 39.69 C
ATOM 14 N9 G A 53 -12.807 59.676 8.144 1.00 39.49 N
ATOM 15 C8 G A 53 -13.064 60.983 8.488 1.00 39.12 C
ATOM 16 N7 G A 53 -12.328 61.846 7.848 1.00 39.50 N
ATOM 17 C5 G A 53 -11.526 61.067 7.023 1.00 39.65 C
ATOM 18 C6 G A 53 -10.522 61.446 6.094 1.00 39.71 C
ATOM 19 O6 G A 53 -10.142 62.589 5.809 1.00 40.14 O
ATOM 20 N1 G A 53 -9.937 60.349 5.457 1.00 39.57 N
ATOM 21 C2 G A 53 -10.277 59.037 5.687 1.00 39.10 C
ATOM 22 N2 G A 53 -9.611 58.110 4.984 1.00 38.30 N
ATOM 23 N3 G A 53 -11.212 58.670 6.557 1.00 39.76 N
ATOM 24 C4 G A 53 -11.802 59.727 7.192 1.00 39.72 C
ATOM 25 P G A 54 -10.785 57.643 12.691 1.00 38.00 P
ATOM 26 OP1 G A 54 -10.683 56.616 13.747 1.00 38.18 O
ATOM 27 OP2 G A 54 -10.827 59.076 13.061 1.00 38.53 O
ATOM 28 O5' G A 54 -9.579 57.443 11.666 1.00 38.18 O
TER
ATOM 1 O3' A B 50 -18.266 56.096 7.883 1.00 42.86 O
ATOM 2 P U B 51 -18.904 57.228 6.949 1.00 43.40 P
ATOM 3 OP1 U B 51 -19.859 58.008 7.769 1.00 43.44 O
ATOM 4 OP2 U B 51 -19.367 56.600 5.692 1.00 43.16 O
ATOM 5 O5' U B 51 -17.638 58.135 6.598 1.00 43.58 O
ATOM 6 C5' U B 51 -17.126 59.029 7.572 1.00 44.32 C
ATOM 7 C4' U B 51 -16.626 60.306 6.925 1.00 44.73 C
ATOM 8 O4' U B 51 -15.320 60.060 6.353 1.00 45.36 O
ATOM 9 C3' U B 51 -17.509 60.892 5.817 1.00 44.86 C
ATOM 10 O3' U B 51 -17.951 62.260 6.039 1.00 44.61 O
ATOM 11 C2' U B 51 -16.706 60.667 4.525 1.00 45.19 C
ATOM 12 O2' U B 51 -16.769 61.733 3.599 1.00 45.67 O
ATOM 13 C1' U B 51 -15.269 60.468 5.002 1.00 45.60 C
ATOM 14 N1 U B 51 -14.518 59.415 4.231 1.00 46.09 N
ATOM 15 C2 U B 51 -13.246 59.678 3.740 1.00 46.02 C
ATOM 16 O2 U B 51 -12.658 60.736 3.883 1.00 46.10 O
ATOM 17 N3 U B 51 -12.670 58.635 3.053 1.00 45.72 N
ATOM 18 C4 U B 51 -13.223 57.389 2.815 1.00 45.74 C
ATOM 19 O4 U B 51 -12.590 56.560 2.179 1.00 45.98 O
ATOM 20 C5 U B 51 -14.541 57.182 3.353 1.00 45.83 C
ATOM 21 C6 U B 51 -15.121 58.181 4.028 1.00 46.10 C
ATOM 22 P C B 52 -17.207 63.406 6.890 1.00 44.30 P
ATOM 23 OP1 C B 52 -17.969 64.648 6.634 1.00 44.32 O
ATOM 24 OP2 C B 52 -15.752 63.373 6.618 1.00 44.05 O
ATOM 25 O5' C B 52 -17.460 63.029 8.421 1.00 43.71 O
TER
Atoms:
OP1: (-14.380,61.630,14.076)
OP2: (-14.151,63.187,12.034)
C3': (-12.541,58.196,10.844)
C1': (-13.452,58.481,8.699)
C5': (-14.484,59.357,12.053)
O6: (-10.142,62.589,5.809)
O4': (-14.437,58.870,9.646)
C8: (-13.064,60.983,8.488)
C2: (-10.277,59.037,5.687)
C6: (-10.522,61.446,6.094)
C5: (-11.526,61.067,7.023)
C4: (-11.802,59.727,7.192)
P: (-14.644,61.926,12.647)
C4': (-14.043,58.395,10.963)
C2': (-12.463,57.586,9.455)
O2': (-12.859,56.226,9.438)
N1: (-9.937,60.349,5.457)
N2: (-9.611,58.110,4.984)
N3: (-11.212,58.670,6.557)
N7: (-12.328,61.846,7.848)
N9: (-12.807,59.676,8.144)
O5': (-14.131,60.707,11.741)
O3': (-12.084,57.297,11.827)
OP2: (-14.151,63.187,12.034)
C3': (-12.541,58.196,10.844)
C1': (-13.452,58.481,8.699)
C5': (-14.484,59.357,12.053)
O6: (-10.142,62.589,5.809)
O4': (-14.437,58.870,9.646)
C8: (-13.064,60.983,8.488)
C2: (-10.277,59.037,5.687)
C6: (-10.522,61.446,6.094)
C5: (-11.526,61.067,7.023)
C4: (-11.802,59.727,7.192)
P: (-14.644,61.926,12.647)
C4': (-14.043,58.395,10.963)
C2': (-12.463,57.586,9.455)
O2': (-12.859,56.226,9.438)
N1: (-9.937,60.349,5.457)
N2: (-9.611,58.110,4.984)
N3: (-11.212,58.670,6.557)
N7: (-12.328,61.846,7.848)
N9: (-12.807,59.676,8.144)
O5': (-14.131,60.707,11.741)
O3': (-12.084,57.297,11.827)
C4: (-13.223,57.389,2.815)
N3: (-12.670,58.635,3.053)
OP1: (-19.859,58.008,7.769)
OP2: (-19.367,56.600,5.692)
C2: (-13.246,59.678,3.740)
C1': (-15.269,60.468,5.002)
C3': (-17.509,60.892,5.817)
O5': (-17.638,58.135,6.598)
O4': (-15.320,60.060,6.353)
C5': (-17.126,59.029,7.572)
P: (-18.904,57.228,6.949)
C4': (-16.626,60.306,6.925)
C2': (-16.706,60.667,4.525)
O2': (-16.769,61.733,3.599)
N1: (-14.518,59.415,4.231)
O4: (-12.590,56.560,2.179)
O2: (-12.658,60.736,3.883)
C6: (-15.121,58.181,4.028)
C5: (-14.541,57.182,3.353)
O3': (-17.951,62.260,6.039)
N3: (-12.670,58.635,3.053)
OP1: (-19.859,58.008,7.769)
OP2: (-19.367,56.600,5.692)
C2: (-13.246,59.678,3.740)
C1': (-15.269,60.468,5.002)
C3': (-17.509,60.892,5.817)
O5': (-17.638,58.135,6.598)
O4': (-15.320,60.060,6.353)
C5': (-17.126,59.029,7.572)
P: (-18.904,57.228,6.949)
C4': (-16.626,60.306,6.925)
C2': (-16.706,60.667,4.525)
O2': (-16.769,61.733,3.599)
N1: (-14.518,59.415,4.231)
O4: (-12.590,56.560,2.179)
O2: (-12.658,60.736,3.883)
C6: (-15.121,58.181,4.028)
C5: (-14.541,57.182,3.353)
O3': (-17.951,62.260,6.039)
Image (generated by PyMOL):