Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A53:A51
Extra
PDB:
ATOM 1 O3' C A 52 -16.067 62.159 12.224 1.00 34.15 O
ATOM 2 P G A 53 -14.485 62.061 12.396 1.00 34.58 P
ATOM 3 OP1 G A 53 -14.199 61.694 13.802 1.00 34.71 O
ATOM 4 OP2 G A 53 -13.897 63.292 11.822 1.00 34.87 O
ATOM 5 O5' G A 53 -14.094 60.841 11.442 1.00 34.67 O
ATOM 6 C5' G A 53 -14.406 59.500 11.805 1.00 34.36 C
ATOM 7 C4' G A 53 -13.796 58.517 10.824 1.00 33.65 C
ATOM 8 O4' G A 53 -14.041 58.938 9.456 1.00 33.99 O
ATOM 9 C3' G A 53 -12.285 58.384 10.872 1.00 33.02 C
ATOM 10 O3' G A 53 -11.890 57.586 11.980 1.00 32.45 O
ATOM 11 C2' G A 53 -12.072 57.684 9.537 1.00 33.06 C
ATOM 12 O2' G A 53 -12.548 56.351 9.541 1.00 32.63 O
ATOM 13 C1' G A 53 -12.956 58.538 8.637 1.00 33.74 C
ATOM 14 N9 G A 53 -12.290 59.721 8.075 1.00 34.23 N
ATOM 15 C8 G A 53 -12.526 61.038 8.399 1.00 34.17 C
ATOM 16 N7 G A 53 -11.783 61.886 7.743 1.00 34.37 N
ATOM 17 C5 G A 53 -10.999 61.085 6.923 1.00 34.36 C
ATOM 18 C6 G A 53 -9.999 61.440 5.980 1.00 34.45 C
ATOM 19 O6 G A 53 -9.598 62.571 5.675 1.00 34.33 O
ATOM 20 N1 G A 53 -9.441 60.324 5.355 1.00 34.48 N
ATOM 21 C2 G A 53 -9.803 59.021 5.610 1.00 34.20 C
ATOM 22 N2 G A 53 -9.158 58.073 4.914 1.00 33.73 N
ATOM 23 N3 G A 53 -10.738 58.679 6.491 1.00 34.19 N
ATOM 24 C4 G A 53 -11.297 59.751 7.112 1.00 34.19 C
ATOM 25 P G A 54 -10.514 57.849 12.756 1.00 31.72 P
ATOM 26 OP1 G A 54 -10.396 56.814 13.805 1.00 31.58 O
ATOM 27 OP2 G A 54 -10.450 59.276 13.133 1.00 32.21 O
ATOM 28 O5' G A 54 -9.397 57.615 11.635 1.00 31.93 O
TER
ATOM 1 O3' A B 50 -18.048 56.331 7.702 1.00 35.12 O
ATOM 2 P U B 51 -18.618 57.464 6.725 1.00 36.27 P
ATOM 3 OP1 U B 51 -19.696 58.190 7.437 1.00 36.49 O
ATOM 4 OP2 U B 51 -18.913 56.849 5.415 1.00 36.17 O
ATOM 5 O5' U B 51 -17.347 58.422 6.545 1.00 36.99 O
ATOM 6 C5' U B 51 -16.981 59.353 7.567 1.00 37.54 C
ATOM 7 C4' U B 51 -16.291 60.573 6.982 1.00 37.74 C
ATOM 8 O4' U B 51 -15.004 60.161 6.461 1.00 38.28 O
ATOM 9 C3' U B 51 -17.046 61.276 5.841 1.00 37.94 C
ATOM 10 O3' U B 51 -17.614 62.588 6.173 1.00 37.43 O
ATOM 11 C2' U B 51 -16.100 61.237 4.628 1.00 38.40 C
ATOM 12 O2' U B 51 -15.911 62.482 3.981 1.00 38.90 O
ATOM 13 C1' U B 51 -14.770 60.726 5.184 1.00 39.00 C
ATOM 14 N1 U B 51 -14.115 59.696 4.295 1.00 39.49 N
ATOM 15 C2 U B 51 -12.863 59.945 3.743 1.00 39.60 C
ATOM 16 O2 U B 51 -12.220 60.963 3.923 1.00 39.62 O
ATOM 17 N3 U B 51 -12.369 58.938 2.949 1.00 39.68 N
ATOM 18 C4 U B 51 -12.984 57.733 2.652 1.00 39.81 C
ATOM 19 O4 U B 51 -12.416 56.930 1.921 1.00 39.87 O
ATOM 20 C5 U B 51 -14.280 57.541 3.256 1.00 39.71 C
ATOM 21 C6 U B 51 -14.783 58.508 4.036 1.00 39.57 C
ATOM 22 P C B 52 -16.881 63.850 6.853 1.00 36.68 P
ATOM 23 OP1 C B 52 -17.368 65.044 6.130 1.00 36.33 O
ATOM 24 OP2 C B 52 -15.421 63.619 6.956 1.00 36.88 O
ATOM 25 O5' C B 52 -17.510 63.864 8.327 1.00 35.71 O
TER
ATOM 2 P G A 53 -14.485 62.061 12.396 1.00 34.58 P
ATOM 3 OP1 G A 53 -14.199 61.694 13.802 1.00 34.71 O
ATOM 4 OP2 G A 53 -13.897 63.292 11.822 1.00 34.87 O
ATOM 5 O5' G A 53 -14.094 60.841 11.442 1.00 34.67 O
ATOM 6 C5' G A 53 -14.406 59.500 11.805 1.00 34.36 C
ATOM 7 C4' G A 53 -13.796 58.517 10.824 1.00 33.65 C
ATOM 8 O4' G A 53 -14.041 58.938 9.456 1.00 33.99 O
ATOM 9 C3' G A 53 -12.285 58.384 10.872 1.00 33.02 C
ATOM 10 O3' G A 53 -11.890 57.586 11.980 1.00 32.45 O
ATOM 11 C2' G A 53 -12.072 57.684 9.537 1.00 33.06 C
ATOM 12 O2' G A 53 -12.548 56.351 9.541 1.00 32.63 O
ATOM 13 C1' G A 53 -12.956 58.538 8.637 1.00 33.74 C
ATOM 14 N9 G A 53 -12.290 59.721 8.075 1.00 34.23 N
ATOM 15 C8 G A 53 -12.526 61.038 8.399 1.00 34.17 C
ATOM 16 N7 G A 53 -11.783 61.886 7.743 1.00 34.37 N
ATOM 17 C5 G A 53 -10.999 61.085 6.923 1.00 34.36 C
ATOM 18 C6 G A 53 -9.999 61.440 5.980 1.00 34.45 C
ATOM 19 O6 G A 53 -9.598 62.571 5.675 1.00 34.33 O
ATOM 20 N1 G A 53 -9.441 60.324 5.355 1.00 34.48 N
ATOM 21 C2 G A 53 -9.803 59.021 5.610 1.00 34.20 C
ATOM 22 N2 G A 53 -9.158 58.073 4.914 1.00 33.73 N
ATOM 23 N3 G A 53 -10.738 58.679 6.491 1.00 34.19 N
ATOM 24 C4 G A 53 -11.297 59.751 7.112 1.00 34.19 C
ATOM 25 P G A 54 -10.514 57.849 12.756 1.00 31.72 P
ATOM 26 OP1 G A 54 -10.396 56.814 13.805 1.00 31.58 O
ATOM 27 OP2 G A 54 -10.450 59.276 13.133 1.00 32.21 O
ATOM 28 O5' G A 54 -9.397 57.615 11.635 1.00 31.93 O
TER
ATOM 1 O3' A B 50 -18.048 56.331 7.702 1.00 35.12 O
ATOM 2 P U B 51 -18.618 57.464 6.725 1.00 36.27 P
ATOM 3 OP1 U B 51 -19.696 58.190 7.437 1.00 36.49 O
ATOM 4 OP2 U B 51 -18.913 56.849 5.415 1.00 36.17 O
ATOM 5 O5' U B 51 -17.347 58.422 6.545 1.00 36.99 O
ATOM 6 C5' U B 51 -16.981 59.353 7.567 1.00 37.54 C
ATOM 7 C4' U B 51 -16.291 60.573 6.982 1.00 37.74 C
ATOM 8 O4' U B 51 -15.004 60.161 6.461 1.00 38.28 O
ATOM 9 C3' U B 51 -17.046 61.276 5.841 1.00 37.94 C
ATOM 10 O3' U B 51 -17.614 62.588 6.173 1.00 37.43 O
ATOM 11 C2' U B 51 -16.100 61.237 4.628 1.00 38.40 C
ATOM 12 O2' U B 51 -15.911 62.482 3.981 1.00 38.90 O
ATOM 13 C1' U B 51 -14.770 60.726 5.184 1.00 39.00 C
ATOM 14 N1 U B 51 -14.115 59.696 4.295 1.00 39.49 N
ATOM 15 C2 U B 51 -12.863 59.945 3.743 1.00 39.60 C
ATOM 16 O2 U B 51 -12.220 60.963 3.923 1.00 39.62 O
ATOM 17 N3 U B 51 -12.369 58.938 2.949 1.00 39.68 N
ATOM 18 C4 U B 51 -12.984 57.733 2.652 1.00 39.81 C
ATOM 19 O4 U B 51 -12.416 56.930 1.921 1.00 39.87 O
ATOM 20 C5 U B 51 -14.280 57.541 3.256 1.00 39.71 C
ATOM 21 C6 U B 51 -14.783 58.508 4.036 1.00 39.57 C
ATOM 22 P C B 52 -16.881 63.850 6.853 1.00 36.68 P
ATOM 23 OP1 C B 52 -17.368 65.044 6.130 1.00 36.33 O
ATOM 24 OP2 C B 52 -15.421 63.619 6.956 1.00 36.88 O
ATOM 25 O5' C B 52 -17.510 63.864 8.327 1.00 35.71 O
TER
Atoms:
OP1: (-14.199,61.694,13.802)
OP2: (-13.897,63.292,11.822)
C3': (-12.285,58.384,10.872)
C1': (-12.956,58.538,8.637)
C5': (-14.406,59.500,11.805)
O6: (-9.598,62.571,5.675)
O4': (-14.041,58.938,9.456)
C8: (-12.526,61.038,8.399)
C2: (-9.803,59.021,5.610)
C6: (-9.999,61.440,5.980)
C5: (-10.999,61.085,6.923)
C4: (-11.297,59.751,7.112)
P: (-14.485,62.061,12.396)
C4': (-13.796,58.517,10.824)
C2': (-12.072,57.684,9.537)
O2': (-12.548,56.351,9.541)
N1: (-9.441,60.324,5.355)
N2: (-9.158,58.073,4.914)
N3: (-10.738,58.679,6.491)
N7: (-11.783,61.886,7.743)
N9: (-12.290,59.721,8.075)
O5': (-14.094,60.841,11.442)
O3': (-11.890,57.586,11.980)
OP2: (-13.897,63.292,11.822)
C3': (-12.285,58.384,10.872)
C1': (-12.956,58.538,8.637)
C5': (-14.406,59.500,11.805)
O6: (-9.598,62.571,5.675)
O4': (-14.041,58.938,9.456)
C8: (-12.526,61.038,8.399)
C2: (-9.803,59.021,5.610)
C6: (-9.999,61.440,5.980)
C5: (-10.999,61.085,6.923)
C4: (-11.297,59.751,7.112)
P: (-14.485,62.061,12.396)
C4': (-13.796,58.517,10.824)
C2': (-12.072,57.684,9.537)
O2': (-12.548,56.351,9.541)
N1: (-9.441,60.324,5.355)
N2: (-9.158,58.073,4.914)
N3: (-10.738,58.679,6.491)
N7: (-11.783,61.886,7.743)
N9: (-12.290,59.721,8.075)
O5': (-14.094,60.841,11.442)
O3': (-11.890,57.586,11.980)
C4: (-12.984,57.733,2.652)
N3: (-12.369,58.938,2.949)
OP1: (-19.696,58.190,7.437)
OP2: (-18.913,56.849,5.415)
C2: (-12.863,59.945,3.743)
C1': (-14.770,60.726,5.184)
C3': (-17.046,61.276,5.841)
O5': (-17.347,58.422,6.545)
O4': (-15.004,60.161,6.461)
C5': (-16.981,59.353,7.567)
P: (-18.618,57.464,6.725)
C4': (-16.291,60.573,6.982)
C2': (-16.100,61.237,4.628)
O2': (-15.911,62.482,3.981)
N1: (-14.115,59.696,4.295)
O4: (-12.416,56.930,1.921)
O2: (-12.220,60.963,3.923)
C6: (-14.783,58.508,4.036)
C5: (-14.280,57.541,3.256)
O3': (-17.614,62.588,6.173)
N3: (-12.369,58.938,2.949)
OP1: (-19.696,58.190,7.437)
OP2: (-18.913,56.849,5.415)
C2: (-12.863,59.945,3.743)
C1': (-14.770,60.726,5.184)
C3': (-17.046,61.276,5.841)
O5': (-17.347,58.422,6.545)
O4': (-15.004,60.161,6.461)
C5': (-16.981,59.353,7.567)
P: (-18.618,57.464,6.725)
C4': (-16.291,60.573,6.982)
C2': (-16.100,61.237,4.628)
O2': (-15.911,62.482,3.981)
N1: (-14.115,59.696,4.295)
O4: (-12.416,56.930,1.921)
O2: (-12.220,60.963,3.923)
C6: (-14.783,58.508,4.036)
C5: (-14.280,57.541,3.256)
O3': (-17.614,62.588,6.173)
Image (generated by PyMOL):