ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:01297:01296

Extra

PDB:
ATOM 1 O3' A A1296 9.970 142.925 69.479 1.00 52.27 O
ATOM 2 P U A1297 10.316 143.466 68.004 1.00 52.99 P
ATOM 3 OP1 U A1297 10.109 144.938 68.003 1.00 51.57 O
ATOM 4 OP2 U A1297 9.595 142.614 67.028 1.00 52.86 O
ATOM 5 O5' U A1297 11.871 143.169 67.820 1.00 52.12 O
ATOM 6 C5' U A1297 12.865 143.857 68.604 1.00 47.63 C
ATOM 7 C4' U A1297 14.230 143.278 68.329 1.00 47.92 C
ATOM 8 O4' U A1297 14.229 141.871 68.688 1.00 46.94 O
ATOM 9 C3' U A1297 14.677 143.274 66.873 1.00 49.33 C
ATOM 10 O3' U A1297 15.225 144.519 66.459 1.00 49.73 O
ATOM 11 C2' U A1297 15.727 142.174 66.866 1.00 48.74 C
ATOM 12 O2' U A1297 16.967 142.604 67.390 1.00 49.90 O
ATOM 13 C1' U A1297 15.092 141.158 67.815 1.00 46.20 C
ATOM 14 N1 U A1297 14.311 140.138 67.102 1.00 43.54 N
ATOM 15 C2 U A1297 15.009 139.094 66.509 1.00 44.03 C
ATOM 16 O2 U A1297 16.223 138.996 66.549 1.00 44.96 O
ATOM 17 N3 U A1297 14.229 138.169 65.864 1.00 43.60 N
ATOM 18 C4 U A1297 12.858 138.186 65.741 1.00 42.65 C
ATOM 19 O4 U A1297 12.301 137.284 65.121 1.00 43.90 O
ATOM 20 C5 U A1297 12.211 139.296 66.370 1.00 41.26 C
ATOM 21 C6 U A1297 12.940 140.208 67.016 1.00 41.61 C
ATOM 22 P G A1298 15.108 144.965 64.920 1.00 50.80 P
ATOM 23 OP1 G A1298 15.899 146.218 64.774 1.00 51.37 O
ATOM 24 OP2 G A1298 13.677 144.954 64.539 1.00 51.78 O
ATOM 25 O5' G A1298 15.832 143.797 64.109 1.00 49.30 O
TER

ATOM 1 O3' U B1295 5.538 138.631 70.425 1.00 49.94 O
ATOM 2 P A B1296 6.020 139.445 69.131 1.00 51.34 P
ATOM 3 OP1 A B1296 5.135 140.625 68.992 1.00 53.45 O
ATOM 4 OP2 A B1296 6.143 138.471 68.011 1.00 50.61 O
ATOM 5 O5' A B1296 7.477 139.977 69.507 1.00 53.18 O
ATOM 6 C5' A B1296 7.667 140.932 70.576 1.00 51.69 C
ATOM 7 C4' A B1296 9.140 141.101 70.888 1.00 51.15 C
ATOM 8 O4' A B1296 9.710 139.821 71.279 1.00 51.17 O
ATOM 9 C3' A B1296 10.044 141.530 69.746 1.00 51.50 C
ATOM 10 O3' A B1296 9.970 142.925 69.479 1.00 52.27 O
ATOM 11 C2' A B1296 11.414 141.131 70.275 1.00 51.19 C
ATOM 12 O2' A B1296 11.908 142.037 71.244 1.00 53.56 O
ATOM 13 C1' A B1296 11.092 139.800 70.954 1.00 49.76 C
ATOM 14 N9 A B1296 11.367 138.660 70.079 1.00 48.39 N
ATOM 15 C8 A B1296 10.498 137.893 69.332 1.00 46.66 C
ATOM 16 N7 A B1296 11.091 136.949 68.634 1.00 45.35 N
ATOM 17 C5 A B1296 12.440 137.101 68.945 1.00 46.25 C
ATOM 18 C6 A B1296 13.597 136.409 68.534 1.00 44.64 C
ATOM 19 N6 A B1296 13.585 135.379 67.684 1.00 43.58 N
ATOM 20 N1 A B1296 14.786 136.819 69.035 1.00 45.23 N
ATOM 21 C2 A B1296 14.807 137.849 69.891 1.00 43.99 C
ATOM 22 N3 A B1296 13.794 138.578 70.352 1.00 46.96 N
ATOM 23 C4 A B1296 12.623 138.149 69.836 1.00 47.96 C
ATOM 24 P U B1297 10.316 143.466 68.004 1.00 52.99 P
ATOM 25 OP1 U B1297 10.109 144.938 68.003 1.00 51.57 O
ATOM 26 OP2 U B1297 9.595 142.614 67.028 1.00 52.86 O
ATOM 27 O5' U B1297 11.871 143.169 67.820 1.00 52.12 O
TER

Atoms:
C4: (12.858,138.186,65.741)
N3: (14.229,138.169,65.864)
OP1: (10.109,144.938,68.003)
OP2: (9.595,142.614,67.028)
C2: (15.009,139.094,66.509)
C1': (15.092,141.158,67.815)
C3': (14.677,143.274,66.873)
O5': (11.871,143.169,67.820)
O4': (14.229,141.871,68.688)
C5': (12.865,143.857,68.604)
P: (10.316,143.466,68.004)
C4': (14.230,143.278,68.329)
C2': (15.727,142.174,66.866)
O2': (16.967,142.604,67.390)
N1: (14.311,140.138,67.102)
O4: (12.301,137.284,65.121)
O2: (16.223,138.996,66.549)
C6: (12.940,140.208,67.016)
C5: (12.211,139.296,66.370)
O3': (15.225,144.519,66.459)
OP1: (5.135,140.625,68.992)
OP2: (6.143,138.471,68.011)
C3': (10.044,141.530,69.746)
C1': (11.092,139.800,70.954)
C5': (7.667,140.932,70.576)
O4': (9.710,139.821,71.279)
C8: (10.498,137.893,69.332)
O2': (11.908,142.037,71.244)
C6: (13.597,136.409,68.534)
C5: (12.440,137.101,68.945)
C4: (12.623,138.149,69.836)
P: (6.020,139.445,69.131)
C4': (9.140,141.101,70.888)
C2': (11.414,141.131,70.275)
C2: (14.807,137.849,69.891)
N1: (14.786,136.819,69.035)
N3: (13.794,138.578,70.352)
N6: (13.585,135.379,67.684)
N7: (11.091,136.949,68.634)
N9: (11.367,138.660,70.079)
O5': (7.477,139.977,69.507)
O3': (9.970,142.925,69.479)
Image (generated by PyMOL):
PyMOL image
show in jmol