Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A53:A51
Extra
PDB:
ATOM 1 O3' C A 52 -16.432 61.871 12.162 1.00 26.13 O
ATOM 2 P G A 53 -14.839 61.899 12.305 1.00 25.99 P
ATOM 3 OP1 G A 53 -14.520 61.724 13.739 1.00 25.90 O
ATOM 4 OP2 G A 53 -14.341 63.090 11.577 1.00 26.35 O
ATOM 5 O5' G A 53 -14.363 60.617 11.479 1.00 26.22 O
ATOM 6 C5' G A 53 -14.713 59.292 11.868 1.00 26.36 C
ATOM 7 C4' G A 53 -14.116 58.278 10.907 1.00 26.08 C
ATOM 8 O4' G A 53 -14.418 58.629 9.529 1.00 26.63 O
ATOM 9 C3' G A 53 -12.600 58.185 10.922 1.00 25.80 C
ATOM 10 O3' G A 53 -12.153 57.397 12.018 1.00 25.33 O
ATOM 11 C2' G A 53 -12.356 57.514 9.575 1.00 26.08 C
ATOM 12 O2' G A 53 -12.681 56.136 9.577 1.00 26.03 O
ATOM 13 C1' G A 53 -13.319 58.298 8.691 1.00 26.57 C
ATOM 14 N9 G A 53 -12.730 59.524 8.136 1.00 26.92 N
ATOM 15 C8 G A 53 -13.061 60.817 8.468 1.00 27.03 C
ATOM 16 N7 G A 53 -12.378 61.723 7.828 1.00 27.14 N
ATOM 17 C5 G A 53 -11.529 60.991 7.011 1.00 27.09 C
ATOM 18 C6 G A 53 -10.552 61.437 6.085 1.00 26.83 C
ATOM 19 O6 G A 53 -10.245 62.606 5.808 1.00 26.71 O
ATOM 20 N1 G A 53 -9.902 60.374 5.454 1.00 26.71 N
ATOM 21 C2 G A 53 -10.167 59.044 5.691 1.00 26.78 C
ATOM 22 N2 G A 53 -9.447 58.152 4.993 1.00 26.70 N
ATOM 23 N3 G A 53 -11.082 58.616 6.558 1.00 26.95 N
ATOM 24 C4 G A 53 -11.729 59.635 7.185 1.00 27.08 C
ATOM 25 P G A 54 -10.769 57.720 12.755 1.00 24.35 P
ATOM 26 OP1 G A 54 -10.579 56.693 13.802 1.00 24.83 O
ATOM 27 OP2 G A 54 -10.733 59.154 13.121 1.00 24.90 O
ATOM 28 O5' G A 54 -9.693 57.486 11.606 1.00 24.61 O
TER
ATOM 1 O3' A B 50 -18.324 56.228 7.799 1.00 26.52 O
ATOM 2 P U B 51 -19.150 57.226 6.848 1.00 27.91 P
ATOM 3 OP1 U B 51 -20.234 57.842 7.651 1.00 27.43 O
ATOM 4 OP2 U B 51 -19.496 56.519 5.595 1.00 28.00 O
ATOM 5 O5' U B 51 -18.057 58.336 6.496 1.00 28.07 O
ATOM 6 C5' U B 51 -17.649 59.264 7.494 1.00 28.61 C
ATOM 7 C4' U B 51 -16.826 60.382 6.889 1.00 28.64 C
ATOM 8 O4' U B 51 -15.568 59.821 6.447 1.00 29.11 O
ATOM 9 C3' U B 51 -17.468 61.084 5.684 1.00 28.71 C
ATOM 10 O3' U B 51 -17.963 62.438 5.950 1.00 28.36 O
ATOM 11 C2' U B 51 -16.434 60.966 4.554 1.00 28.79 C
ATOM 12 O2' U B 51 -16.122 62.187 3.913 1.00 29.51 O
ATOM 13 C1' U B 51 -15.179 60.412 5.225 1.00 29.20 C
ATOM 14 N1 U B 51 -14.477 59.401 4.358 1.00 29.34 N
ATOM 15 C2 U B 51 -13.316 59.764 3.690 1.00 29.32 C
ATOM 16 O2 U B 51 -12.804 60.868 3.765 1.00 29.70 O
ATOM 17 N3 U B 51 -12.761 58.773 2.916 1.00 29.05 N
ATOM 18 C4 U B 51 -13.241 57.487 2.742 1.00 29.11 C
ATOM 19 O4 U B 51 -12.638 56.706 2.015 1.00 29.16 O
ATOM 20 C5 U B 51 -14.453 57.184 3.463 1.00 29.15 C
ATOM 21 C6 U B 51 -15.013 58.130 4.226 1.00 29.08 C
ATOM 22 P C B 52 -17.213 63.582 6.795 1.00 27.83 P
ATOM 23 OP1 C B 52 -17.641 64.880 6.238 1.00 27.71 O
ATOM 24 OP2 C B 52 -15.764 63.280 6.889 1.00 28.13 O
ATOM 25 O5' C B 52 -17.858 63.448 8.251 1.00 27.40 O
TER
ATOM 2 P G A 53 -14.839 61.899 12.305 1.00 25.99 P
ATOM 3 OP1 G A 53 -14.520 61.724 13.739 1.00 25.90 O
ATOM 4 OP2 G A 53 -14.341 63.090 11.577 1.00 26.35 O
ATOM 5 O5' G A 53 -14.363 60.617 11.479 1.00 26.22 O
ATOM 6 C5' G A 53 -14.713 59.292 11.868 1.00 26.36 C
ATOM 7 C4' G A 53 -14.116 58.278 10.907 1.00 26.08 C
ATOM 8 O4' G A 53 -14.418 58.629 9.529 1.00 26.63 O
ATOM 9 C3' G A 53 -12.600 58.185 10.922 1.00 25.80 C
ATOM 10 O3' G A 53 -12.153 57.397 12.018 1.00 25.33 O
ATOM 11 C2' G A 53 -12.356 57.514 9.575 1.00 26.08 C
ATOM 12 O2' G A 53 -12.681 56.136 9.577 1.00 26.03 O
ATOM 13 C1' G A 53 -13.319 58.298 8.691 1.00 26.57 C
ATOM 14 N9 G A 53 -12.730 59.524 8.136 1.00 26.92 N
ATOM 15 C8 G A 53 -13.061 60.817 8.468 1.00 27.03 C
ATOM 16 N7 G A 53 -12.378 61.723 7.828 1.00 27.14 N
ATOM 17 C5 G A 53 -11.529 60.991 7.011 1.00 27.09 C
ATOM 18 C6 G A 53 -10.552 61.437 6.085 1.00 26.83 C
ATOM 19 O6 G A 53 -10.245 62.606 5.808 1.00 26.71 O
ATOM 20 N1 G A 53 -9.902 60.374 5.454 1.00 26.71 N
ATOM 21 C2 G A 53 -10.167 59.044 5.691 1.00 26.78 C
ATOM 22 N2 G A 53 -9.447 58.152 4.993 1.00 26.70 N
ATOM 23 N3 G A 53 -11.082 58.616 6.558 1.00 26.95 N
ATOM 24 C4 G A 53 -11.729 59.635 7.185 1.00 27.08 C
ATOM 25 P G A 54 -10.769 57.720 12.755 1.00 24.35 P
ATOM 26 OP1 G A 54 -10.579 56.693 13.802 1.00 24.83 O
ATOM 27 OP2 G A 54 -10.733 59.154 13.121 1.00 24.90 O
ATOM 28 O5' G A 54 -9.693 57.486 11.606 1.00 24.61 O
TER
ATOM 1 O3' A B 50 -18.324 56.228 7.799 1.00 26.52 O
ATOM 2 P U B 51 -19.150 57.226 6.848 1.00 27.91 P
ATOM 3 OP1 U B 51 -20.234 57.842 7.651 1.00 27.43 O
ATOM 4 OP2 U B 51 -19.496 56.519 5.595 1.00 28.00 O
ATOM 5 O5' U B 51 -18.057 58.336 6.496 1.00 28.07 O
ATOM 6 C5' U B 51 -17.649 59.264 7.494 1.00 28.61 C
ATOM 7 C4' U B 51 -16.826 60.382 6.889 1.00 28.64 C
ATOM 8 O4' U B 51 -15.568 59.821 6.447 1.00 29.11 O
ATOM 9 C3' U B 51 -17.468 61.084 5.684 1.00 28.71 C
ATOM 10 O3' U B 51 -17.963 62.438 5.950 1.00 28.36 O
ATOM 11 C2' U B 51 -16.434 60.966 4.554 1.00 28.79 C
ATOM 12 O2' U B 51 -16.122 62.187 3.913 1.00 29.51 O
ATOM 13 C1' U B 51 -15.179 60.412 5.225 1.00 29.20 C
ATOM 14 N1 U B 51 -14.477 59.401 4.358 1.00 29.34 N
ATOM 15 C2 U B 51 -13.316 59.764 3.690 1.00 29.32 C
ATOM 16 O2 U B 51 -12.804 60.868 3.765 1.00 29.70 O
ATOM 17 N3 U B 51 -12.761 58.773 2.916 1.00 29.05 N
ATOM 18 C4 U B 51 -13.241 57.487 2.742 1.00 29.11 C
ATOM 19 O4 U B 51 -12.638 56.706 2.015 1.00 29.16 O
ATOM 20 C5 U B 51 -14.453 57.184 3.463 1.00 29.15 C
ATOM 21 C6 U B 51 -15.013 58.130 4.226 1.00 29.08 C
ATOM 22 P C B 52 -17.213 63.582 6.795 1.00 27.83 P
ATOM 23 OP1 C B 52 -17.641 64.880 6.238 1.00 27.71 O
ATOM 24 OP2 C B 52 -15.764 63.280 6.889 1.00 28.13 O
ATOM 25 O5' C B 52 -17.858 63.448 8.251 1.00 27.40 O
TER
Atoms:
OP1: (-14.520,61.724,13.739)
OP2: (-14.341,63.090,11.577)
C3': (-12.600,58.185,10.922)
C1': (-13.319,58.298,8.691)
C5': (-14.713,59.292,11.868)
O6: (-10.245,62.606,5.808)
O4': (-14.418,58.629,9.529)
C8: (-13.061,60.817,8.468)
C2: (-10.167,59.044,5.691)
C6: (-10.552,61.437,6.085)
C5: (-11.529,60.991,7.011)
C4: (-11.729,59.635,7.185)
P: (-14.839,61.899,12.305)
C4': (-14.116,58.278,10.907)
C2': (-12.356,57.514,9.575)
O2': (-12.681,56.136,9.577)
N1: (-9.902,60.374,5.454)
N2: (-9.447,58.152,4.993)
N3: (-11.082,58.616,6.558)
N7: (-12.378,61.723,7.828)
N9: (-12.730,59.524,8.136)
O5': (-14.363,60.617,11.479)
O3': (-12.153,57.397,12.018)
OP2: (-14.341,63.090,11.577)
C3': (-12.600,58.185,10.922)
C1': (-13.319,58.298,8.691)
C5': (-14.713,59.292,11.868)
O6: (-10.245,62.606,5.808)
O4': (-14.418,58.629,9.529)
C8: (-13.061,60.817,8.468)
C2: (-10.167,59.044,5.691)
C6: (-10.552,61.437,6.085)
C5: (-11.529,60.991,7.011)
C4: (-11.729,59.635,7.185)
P: (-14.839,61.899,12.305)
C4': (-14.116,58.278,10.907)
C2': (-12.356,57.514,9.575)
O2': (-12.681,56.136,9.577)
N1: (-9.902,60.374,5.454)
N2: (-9.447,58.152,4.993)
N3: (-11.082,58.616,6.558)
N7: (-12.378,61.723,7.828)
N9: (-12.730,59.524,8.136)
O5': (-14.363,60.617,11.479)
O3': (-12.153,57.397,12.018)
C4: (-13.241,57.487,2.742)
N3: (-12.761,58.773,2.916)
OP1: (-20.234,57.842,7.651)
OP2: (-19.496,56.519,5.595)
C2: (-13.316,59.764,3.690)
C1': (-15.179,60.412,5.225)
C3': (-17.468,61.084,5.684)
O5': (-18.057,58.336,6.496)
O4': (-15.568,59.821,6.447)
C5': (-17.649,59.264,7.494)
P: (-19.150,57.226,6.848)
C4': (-16.826,60.382,6.889)
C2': (-16.434,60.966,4.554)
O2': (-16.122,62.187,3.913)
N1: (-14.477,59.401,4.358)
O4: (-12.638,56.706,2.015)
O2: (-12.804,60.868,3.765)
C6: (-15.013,58.130,4.226)
C5: (-14.453,57.184,3.463)
O3': (-17.963,62.438,5.950)
N3: (-12.761,58.773,2.916)
OP1: (-20.234,57.842,7.651)
OP2: (-19.496,56.519,5.595)
C2: (-13.316,59.764,3.690)
C1': (-15.179,60.412,5.225)
C3': (-17.468,61.084,5.684)
O5': (-18.057,58.336,6.496)
O4': (-15.568,59.821,6.447)
C5': (-17.649,59.264,7.494)
P: (-19.150,57.226,6.848)
C4': (-16.826,60.382,6.889)
C2': (-16.434,60.966,4.554)
O2': (-16.122,62.187,3.913)
N1: (-14.477,59.401,4.358)
O4: (-12.638,56.706,2.015)
O2: (-12.804,60.868,3.765)
C6: (-15.013,58.130,4.226)
C5: (-14.453,57.184,3.463)
O3': (-17.963,62.438,5.950)
Image (generated by PyMOL):