Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A42:A93
Extra
PDB:
ATOM 1 O3' A A 41 -1.403 51.883 6.588 1.00 23.66 O
ATOM 2 P G A 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 3 OP1 G A 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 4 OP2 G A 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 5 O5' G A 42 0.854 50.900 7.053 1.00 24.04 O
ATOM 6 C5' G A 42 0.975 50.972 8.466 1.00 24.90 C
ATOM 7 C4' G A 42 1.097 49.571 9.046 1.00 25.56 C
ATOM 8 O4' G A 42 -0.087 48.816 8.688 1.00 25.75 O
ATOM 9 C3' G A 42 2.290 48.749 8.565 1.00 25.88 C
ATOM 10 O3' G A 42 2.830 47.982 9.640 1.00 26.68 O
ATOM 11 C2' G A 42 1.705 47.848 7.481 1.00 25.78 C
ATOM 12 O2' G A 42 2.324 46.579 7.425 1.00 25.99 O
ATOM 13 C1' G A 42 0.250 47.687 7.909 1.00 25.78 C
ATOM 14 N9 G A 42 -0.627 47.592 6.743 1.00 25.77 N
ATOM 15 C8 G A 42 -1.251 48.608 6.062 1.00 25.76 C
ATOM 16 N7 G A 42 -1.959 48.203 5.042 1.00 25.90 N
ATOM 17 C5 G A 42 -1.791 46.824 5.042 1.00 25.79 C
ATOM 18 C6 G A 42 -2.313 45.830 4.171 1.00 25.70 C
ATOM 19 O6 G A 42 -3.053 45.978 3.188 1.00 25.38 O
ATOM 20 N1 G A 42 -1.885 44.550 4.531 1.00 25.64 N
ATOM 21 C2 G A 42 -1.065 44.271 5.602 1.00 25.67 C
ATOM 22 N2 G A 42 -0.744 42.988 5.808 1.00 25.91 N
ATOM 23 N3 G A 42 -0.565 45.189 6.419 1.00 25.11 N
ATOM 24 C4 G A 42 -0.973 46.438 6.084 1.00 25.53 C
ATOM 25 P G A 43 4.402 48.008 9.930 1.00 27.20 P
ATOM 26 OP1 G A 43 4.743 46.854 10.782 1.00 26.55 O
ATOM 27 OP2 G A 43 4.744 49.379 10.376 1.00 28.14 O
ATOM 28 O5' G A 43 5.039 47.756 8.483 1.00 27.43 O
TER
ATOM 1 O3' U B 92 0.427 43.820 13.817 1.00 24.86 O
ATOM 2 P U B 93 -1.069 44.362 13.716 1.00 25.28 P
ATOM 3 OP1 U B 93 -1.259 45.307 14.842 1.00 24.99 O
ATOM 4 OP2 U B 93 -2.002 43.225 13.553 1.00 25.23 O
ATOM 5 O5' U B 93 -1.023 45.116 12.303 1.00 25.48 O
ATOM 6 C5' U B 93 -0.675 46.495 12.174 1.00 25.02 C
ATOM 7 C4' U B 93 -1.712 47.215 11.323 1.00 24.77 C
ATOM 8 O4' U B 93 -1.822 46.574 10.025 1.00 24.52 O
ATOM 9 C3' U B 93 -3.120 47.238 11.907 1.00 24.51 C
ATOM 10 O3' U B 93 -3.594 48.571 11.891 1.00 25.24 O
ATOM 11 C2' U B 93 -3.930 46.321 10.992 1.00 24.00 C
ATOM 12 O2' U B 93 -5.288 46.685 10.827 1.00 23.31 O
ATOM 13 C1' U B 93 -3.177 46.425 9.673 1.00 23.75 C
ATOM 14 N1 U B 93 -3.352 45.178 8.881 1.00 23.35 N
ATOM 15 C2 U B 93 -4.146 45.193 7.744 1.00 23.12 C
ATOM 16 O2 U B 93 -4.709 46.184 7.324 1.00 23.15 O
ATOM 17 N3 U B 93 -4.256 43.985 7.100 1.00 22.98 N
ATOM 18 C4 U B 93 -3.663 42.792 7.479 1.00 23.29 C
ATOM 19 O4 U B 93 -3.850 41.787 6.809 1.00 24.09 O
ATOM 20 C5 U B 93 -2.855 42.846 8.672 1.00 23.09 C
ATOM 21 C6 U B 93 -2.735 44.014 9.314 1.00 23.10 C
ATOM 22 P C B 94 -4.311 49.198 13.176 1.00 25.89 P
ATOM 23 OP1 C B 94 -4.078 50.660 13.132 1.00 25.60 O
ATOM 24 OP2 C B 94 -3.936 48.415 14.380 1.00 25.72 O
ATOM 25 O5' C B 94 -5.850 48.931 12.838 1.00 26.64 O
TER
ATOM 2 P G A 42 0.143 52.056 6.213 1.00 23.58 P
ATOM 3 OP1 G A 42 0.598 53.368 6.730 1.00 24.46 O
ATOM 4 OP2 G A 42 0.298 51.729 4.778 1.00 23.41 O
ATOM 5 O5' G A 42 0.854 50.900 7.053 1.00 24.04 O
ATOM 6 C5' G A 42 0.975 50.972 8.466 1.00 24.90 C
ATOM 7 C4' G A 42 1.097 49.571 9.046 1.00 25.56 C
ATOM 8 O4' G A 42 -0.087 48.816 8.688 1.00 25.75 O
ATOM 9 C3' G A 42 2.290 48.749 8.565 1.00 25.88 C
ATOM 10 O3' G A 42 2.830 47.982 9.640 1.00 26.68 O
ATOM 11 C2' G A 42 1.705 47.848 7.481 1.00 25.78 C
ATOM 12 O2' G A 42 2.324 46.579 7.425 1.00 25.99 O
ATOM 13 C1' G A 42 0.250 47.687 7.909 1.00 25.78 C
ATOM 14 N9 G A 42 -0.627 47.592 6.743 1.00 25.77 N
ATOM 15 C8 G A 42 -1.251 48.608 6.062 1.00 25.76 C
ATOM 16 N7 G A 42 -1.959 48.203 5.042 1.00 25.90 N
ATOM 17 C5 G A 42 -1.791 46.824 5.042 1.00 25.79 C
ATOM 18 C6 G A 42 -2.313 45.830 4.171 1.00 25.70 C
ATOM 19 O6 G A 42 -3.053 45.978 3.188 1.00 25.38 O
ATOM 20 N1 G A 42 -1.885 44.550 4.531 1.00 25.64 N
ATOM 21 C2 G A 42 -1.065 44.271 5.602 1.00 25.67 C
ATOM 22 N2 G A 42 -0.744 42.988 5.808 1.00 25.91 N
ATOM 23 N3 G A 42 -0.565 45.189 6.419 1.00 25.11 N
ATOM 24 C4 G A 42 -0.973 46.438 6.084 1.00 25.53 C
ATOM 25 P G A 43 4.402 48.008 9.930 1.00 27.20 P
ATOM 26 OP1 G A 43 4.743 46.854 10.782 1.00 26.55 O
ATOM 27 OP2 G A 43 4.744 49.379 10.376 1.00 28.14 O
ATOM 28 O5' G A 43 5.039 47.756 8.483 1.00 27.43 O
TER
ATOM 1 O3' U B 92 0.427 43.820 13.817 1.00 24.86 O
ATOM 2 P U B 93 -1.069 44.362 13.716 1.00 25.28 P
ATOM 3 OP1 U B 93 -1.259 45.307 14.842 1.00 24.99 O
ATOM 4 OP2 U B 93 -2.002 43.225 13.553 1.00 25.23 O
ATOM 5 O5' U B 93 -1.023 45.116 12.303 1.00 25.48 O
ATOM 6 C5' U B 93 -0.675 46.495 12.174 1.00 25.02 C
ATOM 7 C4' U B 93 -1.712 47.215 11.323 1.00 24.77 C
ATOM 8 O4' U B 93 -1.822 46.574 10.025 1.00 24.52 O
ATOM 9 C3' U B 93 -3.120 47.238 11.907 1.00 24.51 C
ATOM 10 O3' U B 93 -3.594 48.571 11.891 1.00 25.24 O
ATOM 11 C2' U B 93 -3.930 46.321 10.992 1.00 24.00 C
ATOM 12 O2' U B 93 -5.288 46.685 10.827 1.00 23.31 O
ATOM 13 C1' U B 93 -3.177 46.425 9.673 1.00 23.75 C
ATOM 14 N1 U B 93 -3.352 45.178 8.881 1.00 23.35 N
ATOM 15 C2 U B 93 -4.146 45.193 7.744 1.00 23.12 C
ATOM 16 O2 U B 93 -4.709 46.184 7.324 1.00 23.15 O
ATOM 17 N3 U B 93 -4.256 43.985 7.100 1.00 22.98 N
ATOM 18 C4 U B 93 -3.663 42.792 7.479 1.00 23.29 C
ATOM 19 O4 U B 93 -3.850 41.787 6.809 1.00 24.09 O
ATOM 20 C5 U B 93 -2.855 42.846 8.672 1.00 23.09 C
ATOM 21 C6 U B 93 -2.735 44.014 9.314 1.00 23.10 C
ATOM 22 P C B 94 -4.311 49.198 13.176 1.00 25.89 P
ATOM 23 OP1 C B 94 -4.078 50.660 13.132 1.00 25.60 O
ATOM 24 OP2 C B 94 -3.936 48.415 14.380 1.00 25.72 O
ATOM 25 O5' C B 94 -5.850 48.931 12.838 1.00 26.64 O
TER
Atoms:
OP1: (0.598,53.368,6.730)
OP2: (0.298,51.729,4.778)
C3': (2.290,48.749,8.565)
C1': (0.250,47.687,7.909)
C5': (0.975,50.972,8.466)
O6: (-3.053,45.978,3.188)
O4': (-0.087,48.816,8.688)
C8: (-1.251,48.608,6.062)
C2: (-1.065,44.271,5.602)
C6: (-2.313,45.830,4.171)
C5: (-1.791,46.824,5.042)
C4: (-0.973,46.438,6.084)
P: (0.143,52.056,6.213)
C4': (1.097,49.571,9.046)
C2': (1.705,47.848,7.481)
O2': (2.324,46.579,7.425)
N1: (-1.885,44.550,4.531)
N2: (-0.744,42.988,5.808)
N3: (-0.565,45.189,6.419)
N7: (-1.959,48.203,5.042)
N9: (-0.627,47.592,6.743)
O5': (0.854,50.900,7.053)
O3': (2.830,47.982,9.640)
OP2: (0.298,51.729,4.778)
C3': (2.290,48.749,8.565)
C1': (0.250,47.687,7.909)
C5': (0.975,50.972,8.466)
O6: (-3.053,45.978,3.188)
O4': (-0.087,48.816,8.688)
C8: (-1.251,48.608,6.062)
C2: (-1.065,44.271,5.602)
C6: (-2.313,45.830,4.171)
C5: (-1.791,46.824,5.042)
C4: (-0.973,46.438,6.084)
P: (0.143,52.056,6.213)
C4': (1.097,49.571,9.046)
C2': (1.705,47.848,7.481)
O2': (2.324,46.579,7.425)
N1: (-1.885,44.550,4.531)
N2: (-0.744,42.988,5.808)
N3: (-0.565,45.189,6.419)
N7: (-1.959,48.203,5.042)
N9: (-0.627,47.592,6.743)
O5': (0.854,50.900,7.053)
O3': (2.830,47.982,9.640)
C4: (-3.663,42.792,7.479)
N3: (-4.256,43.985,7.100)
OP1: (-1.259,45.307,14.842)
OP2: (-2.002,43.225,13.553)
C2: (-4.146,45.193,7.744)
C1': (-3.177,46.425,9.673)
C3': (-3.120,47.238,11.907)
O5': (-1.023,45.116,12.303)
O4': (-1.822,46.574,10.025)
C5': (-0.675,46.495,12.174)
P: (-1.069,44.362,13.716)
C4': (-1.712,47.215,11.323)
C2': (-3.930,46.321,10.992)
O2': (-5.288,46.685,10.827)
N1: (-3.352,45.178,8.881)
O4: (-3.850,41.787,6.809)
O2: (-4.709,46.184,7.324)
C6: (-2.735,44.014,9.314)
C5: (-2.855,42.846,8.672)
O3': (-3.594,48.571,11.891)
N3: (-4.256,43.985,7.100)
OP1: (-1.259,45.307,14.842)
OP2: (-2.002,43.225,13.553)
C2: (-4.146,45.193,7.744)
C1': (-3.177,46.425,9.673)
C3': (-3.120,47.238,11.907)
O5': (-1.023,45.116,12.303)
O4': (-1.822,46.574,10.025)
C5': (-0.675,46.495,12.174)
P: (-1.069,44.362,13.716)
C4': (-1.712,47.215,11.323)
C2': (-3.930,46.321,10.992)
O2': (-5.288,46.685,10.827)
N1: (-3.352,45.178,8.881)
O4: (-3.850,41.787,6.809)
O2: (-4.709,46.184,7.324)
C6: (-2.735,44.014,9.314)
C5: (-2.855,42.846,8.672)
O3': (-3.594,48.571,11.891)
Image (generated by PyMOL):