ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1852:A1859

Extra

PDB:
ATOM 1 O3' G A1851 83.783 -17.608 6.061 1.00 48.03 O
ATOM 2 P A A1852 84.202 -17.968 7.551 1.00 57.75 P
ATOM 3 OP1 A A1852 82.976 -17.927 8.378 1.00 66.52 O
ATOM 4 OP2 A A1852 85.342 -17.096 7.915 1.00 64.16 O
ATOM 5 O5' A A1852 84.690 -19.455 7.409 1.00 50.04 O
ATOM 6 C5' A A1852 85.601 -19.818 6.396 1.00 49.67 C
ATOM 7 C4' A A1852 85.832 -21.293 6.419 1.00 61.23 C
ATOM 8 O4' A A1852 87.271 -21.560 6.435 1.00 59.51 O
ATOM 9 C3' A A1852 85.256 -22.001 7.646 1.00 58.64 C
ATOM 10 O3' A A1852 84.780 -23.296 7.264 1.00 67.85 O
ATOM 11 C2' A A1852 86.491 -22.152 8.533 1.00 60.90 C
ATOM 12 O2' A A1852 86.399 -23.171 9.505 1.00 69.44 O
ATOM 13 C1' A A1852 87.548 -22.453 7.483 1.00 53.66 C
ATOM 14 N9 A A1852 88.919 -22.256 7.919 1.00 59.23 N
ATOM 15 C8 A A1852 89.876 -23.235 7.955 1.00 70.30 C
ATOM 16 N7 A A1852 91.045 -22.839 8.380 1.00 70.09 N
ATOM 17 C5 A A1852 90.833 -21.499 8.637 1.00 68.43 C
ATOM 18 C6 A A1852 91.690 -20.526 9.117 1.00 59.35 C
ATOM 19 N6 A A1852 92.952 -20.784 9.415 1.00 61.91 N
ATOM 20 N1 A A1852 91.198 -19.291 9.274 1.00 67.06 N
ATOM 21 C2 A A1852 89.922 -19.062 8.955 1.00 67.53 C
ATOM 22 N3 A A1852 89.005 -19.902 8.490 1.00 69.53 N
ATOM 23 C4 A A1852 89.534 -21.120 8.355 1.00 68.36 C
ATOM 24 P A A1853 83.238 -23.698 7.488 1.00 64.58 P
ATOM 25 OP1 A A1853 82.844 -23.201 8.828 1.00 58.30 O
ATOM 26 OP2 A A1853 83.115 -25.152 7.209 1.00 68.20 O
ATOM 27 O5' A A1853 82.498 -22.862 6.353 1.00 67.15 O
TER

ATOM 1 O3' C B1858 96.963 -30.583 8.506 1.00 61.27 O
ATOM 2 P U B1859 96.309 -30.633 9.980 1.00 60.03 P
ATOM 3 OP1 U B1859 96.311 -29.247 10.507 1.00 63.77 O
ATOM 4 OP2 U B1859 97.014 -31.698 10.745 1.00 65.60 O
ATOM 5 O5' U B1859 94.824 -31.085 9.701 1.00 64.68 O
ATOM 6 C5' U B1859 93.961 -31.405 10.776 1.00 70.37 C
ATOM 7 C4' U B1859 92.620 -30.750 10.622 1.00 61.48 C
ATOM 8 O4' U B1859 92.759 -29.313 10.808 1.00 65.23 O
ATOM 9 C3' U B1859 91.961 -30.945 9.268 1.00 48.87 C
ATOM 10 O3' U B1859 90.555 -31.073 9.451 1.00 73.87 O
ATOM 11 C2' U B1859 92.258 -29.633 8.566 1.00 55.39 C
ATOM 12 O2' U B1859 91.356 -29.309 7.535 1.00 77.25 O
ATOM 13 C1' U B1859 92.170 -28.648 9.726 1.00 57.32 C
ATOM 14 N1 U B1859 92.896 -27.385 9.502 1.00 56.27 N
ATOM 15 C2 U B1859 92.153 -26.264 9.205 1.00 57.41 C
ATOM 16 O2 U B1859 90.953 -26.262 9.146 1.00 65.59 O
ATOM 17 N3 U B1859 92.839 -25.120 8.967 1.00 57.03 N
ATOM 18 C4 U B1859 94.195 -24.977 8.995 1.00 62.35 C
ATOM 19 O4 U B1859 94.683 -23.869 8.762 1.00 68.54 O
ATOM 20 C5 U B1859 94.902 -26.182 9.295 1.00 63.58 C
ATOM 21 C6 U B1859 94.254 -27.323 9.540 1.00 58.08 C
ATOM 22 P U B1860 89.938 -32.447 9.999 1.00 56.70 P
ATOM 23 OP1 U B1860 91.073 -33.365 10.232 1.00 69.10 O
ATOM 24 OP2 U B1860 88.874 -32.851 9.056 1.00 60.70 O
ATOM 25 O5' U B1860 89.295 -32.019 11.382 1.00 58.29 O
TER

Atoms:
OP1: (82.976,-17.927,8.378)
OP2: (85.342,-17.096,7.915)
C3': (85.256,-22.001,7.646)
C1': (87.548,-22.453,7.483)
C5': (85.601,-19.818,6.396)
O4': (87.271,-21.560,6.435)
C8: (89.876,-23.235,7.955)
O2': (86.399,-23.171,9.505)
C6: (91.690,-20.526,9.117)
C5: (90.833,-21.499,8.637)
C4: (89.534,-21.120,8.355)
P: (84.202,-17.968,7.551)
C4': (85.832,-21.293,6.419)
C2': (86.491,-22.152,8.533)
C2: (89.922,-19.062,8.955)
N1: (91.198,-19.291,9.274)
N3: (89.005,-19.902,8.490)
N6: (92.952,-20.784,9.415)
N7: (91.045,-22.839,8.380)
N9: (88.919,-22.256,7.919)
O5': (84.690,-19.455,7.409)
O3': (84.780,-23.296,7.264)
C4: (94.195,-24.977,8.995)
N3: (92.839,-25.120,8.967)
OP1: (96.311,-29.247,10.507)
OP2: (97.014,-31.698,10.745)
C2: (92.153,-26.264,9.205)
C1': (92.170,-28.648,9.726)
C3': (91.961,-30.945,9.268)
O5': (94.824,-31.085,9.701)
O4': (92.759,-29.313,10.808)
C5': (93.961,-31.405,10.776)
P: (96.309,-30.633,9.980)
C4': (92.620,-30.750,10.622)
C2': (92.258,-29.633,8.566)
O2': (91.356,-29.309,7.535)
N1: (92.896,-27.385,9.502)
O4: (94.683,-23.869,8.762)
O2: (90.953,-26.262,9.146)
C6: (94.254,-27.323,9.540)
C5: (94.902,-26.182,9.295)
O3': (90.555,-31.073,9.451)
Image (generated by PyMOL):
PyMOL image
show in jmol