Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21336:21354
Extra
PDB:
ATOM 1 O3' U A1335 -119.195 -93.132 52.123 1.00145.04 O
ATOM 2 P G A1336 -118.385 -94.489 52.319 1.00126.17 P
ATOM 3 OP1 G A1336 -118.967 -95.184 53.490 1.00127.11 O
ATOM 4 OP2 G A1336 -116.944 -94.138 52.344 1.00125.02 O
ATOM 5 O5' G A1336 -118.721 -95.282 50.993 1.00126.47 O
ATOM 6 C5' G A1336 -117.792 -95.332 49.940 1.00125.64 C
ATOM 7 C4' G A1336 -118.190 -94.436 48.807 1.00125.37 C
ATOM 8 O4' G A1336 -118.050 -93.050 49.210 1.00124.80 O
ATOM 9 C3' G A1336 -117.323 -94.550 47.569 1.00124.60 C
ATOM 10 O3' G A1336 -117.704 -95.612 46.733 1.00125.15 O
ATOM 11 C2' G A1336 -117.462 -93.182 46.933 1.00124.08 C
ATOM 12 O2' G A1336 -118.738 -93.036 46.331 1.00124.85 O
ATOM 13 C1' G A1336 -117.429 -92.311 48.172 1.00123.91 C
ATOM 14 N9 G A1336 -116.037 -91.978 48.590 1.00122.88 N
ATOM 15 C8 G A1336 -115.629 -91.837 49.903 1.00122.75 C
ATOM 16 N7 G A1336 -114.376 -91.521 50.058 1.00121.80 N
ATOM 17 C5 G A1336 -113.897 -91.414 48.765 1.00121.23 C
ATOM 18 C6 G A1336 -112.590 -91.092 48.322 1.00120.17 C
ATOM 19 O6 G A1336 -111.602 -90.830 49.007 1.00119.53 O
ATOM 20 N1 G A1336 -112.474 -91.094 46.947 1.00119.90 N
ATOM 21 C2 G A1336 -113.507 -91.373 46.103 1.00120.58 C
ATOM 22 N2 G A1336 -113.196 -91.318 44.804 1.00120.19 N
ATOM 23 N3 G A1336 -114.747 -91.686 46.489 1.00121.58 N
ATOM 24 C4 G A1336 -114.895 -91.689 47.839 1.00121.87 C
ATOM 25 P C A1337 -116.938 -97.018 46.821 1.00127.65 P
ATOM 26 OP1 C A1337 -117.830 -98.029 46.184 1.00128.58 O
ATOM 27 OP2 C A1337 -116.530 -97.222 48.230 1.00127.68 O
ATOM 28 O5' C A1337 -115.649 -96.774 45.918 1.00126.53 O
TER
ATOM 1 O3' A B1353 -112.521 -84.990 41.801 1.00221.15 O
ATOM 2 P U B1354 -111.896 -86.464 41.672 1.00170.79 P
ATOM 3 OP1 U B1354 -111.488 -86.887 43.038 1.00170.76 O
ATOM 4 OP2 U B1354 -110.863 -86.411 40.609 1.00170.03 O
ATOM 5 O5' U B1354 -113.148 -87.317 41.175 1.00171.86 O
ATOM 6 C5' U B1354 -114.181 -86.704 40.409 1.00172.32 C
ATOM 7 C4' U B1354 -115.550 -87.008 40.969 1.00173.40 C
ATOM 8 O4' U B1354 -115.469 -88.174 41.833 1.00173.78 O
ATOM 9 C3' U B1354 -116.180 -85.929 41.855 1.00173.56 C
ATOM 10 O3' U B1354 -116.802 -84.876 41.111 1.00173.64 O
ATOM 11 C2' U B1354 -117.151 -86.738 42.704 1.00174.57 C
ATOM 12 O2' U B1354 -118.314 -87.057 41.953 1.00175.45 O
ATOM 13 C1' U B1354 -116.355 -88.030 42.923 1.00174.44 C
ATOM 14 N1 U B1354 -115.560 -88.017 44.196 1.00173.99 N
ATOM 15 C2 U B1354 -116.162 -88.531 45.337 1.00174.71 C
ATOM 16 O2 U B1354 -117.298 -88.973 45.335 1.00175.66 O
ATOM 17 N3 U B1354 -115.397 -88.514 46.485 1.00174.30 N
ATOM 18 C4 U B1354 -114.111 -88.052 46.625 1.00173.27 C
ATOM 19 O4 U B1354 -113.565 -88.111 47.724 1.00173.06 O
ATOM 20 C5 U B1354 -113.550 -87.541 45.417 1.00172.58 C
ATOM 21 C6 U B1354 -114.266 -87.543 44.282 1.00172.95 C
ATOM 22 P C B1355 -117.315 -83.515 41.844 1.00147.40 P
ATOM 23 OP1 C B1355 -117.474 -82.479 40.781 1.00147.17 O
ATOM 24 OP2 C B1355 -116.386 -83.232 42.974 1.00146.72 O
ATOM 25 O5' C B1355 -118.749 -83.934 42.412 1.00148.61 O
TER
ATOM 2 P G A1336 -118.385 -94.489 52.319 1.00126.17 P
ATOM 3 OP1 G A1336 -118.967 -95.184 53.490 1.00127.11 O
ATOM 4 OP2 G A1336 -116.944 -94.138 52.344 1.00125.02 O
ATOM 5 O5' G A1336 -118.721 -95.282 50.993 1.00126.47 O
ATOM 6 C5' G A1336 -117.792 -95.332 49.940 1.00125.64 C
ATOM 7 C4' G A1336 -118.190 -94.436 48.807 1.00125.37 C
ATOM 8 O4' G A1336 -118.050 -93.050 49.210 1.00124.80 O
ATOM 9 C3' G A1336 -117.323 -94.550 47.569 1.00124.60 C
ATOM 10 O3' G A1336 -117.704 -95.612 46.733 1.00125.15 O
ATOM 11 C2' G A1336 -117.462 -93.182 46.933 1.00124.08 C
ATOM 12 O2' G A1336 -118.738 -93.036 46.331 1.00124.85 O
ATOM 13 C1' G A1336 -117.429 -92.311 48.172 1.00123.91 C
ATOM 14 N9 G A1336 -116.037 -91.978 48.590 1.00122.88 N
ATOM 15 C8 G A1336 -115.629 -91.837 49.903 1.00122.75 C
ATOM 16 N7 G A1336 -114.376 -91.521 50.058 1.00121.80 N
ATOM 17 C5 G A1336 -113.897 -91.414 48.765 1.00121.23 C
ATOM 18 C6 G A1336 -112.590 -91.092 48.322 1.00120.17 C
ATOM 19 O6 G A1336 -111.602 -90.830 49.007 1.00119.53 O
ATOM 20 N1 G A1336 -112.474 -91.094 46.947 1.00119.90 N
ATOM 21 C2 G A1336 -113.507 -91.373 46.103 1.00120.58 C
ATOM 22 N2 G A1336 -113.196 -91.318 44.804 1.00120.19 N
ATOM 23 N3 G A1336 -114.747 -91.686 46.489 1.00121.58 N
ATOM 24 C4 G A1336 -114.895 -91.689 47.839 1.00121.87 C
ATOM 25 P C A1337 -116.938 -97.018 46.821 1.00127.65 P
ATOM 26 OP1 C A1337 -117.830 -98.029 46.184 1.00128.58 O
ATOM 27 OP2 C A1337 -116.530 -97.222 48.230 1.00127.68 O
ATOM 28 O5' C A1337 -115.649 -96.774 45.918 1.00126.53 O
TER
ATOM 1 O3' A B1353 -112.521 -84.990 41.801 1.00221.15 O
ATOM 2 P U B1354 -111.896 -86.464 41.672 1.00170.79 P
ATOM 3 OP1 U B1354 -111.488 -86.887 43.038 1.00170.76 O
ATOM 4 OP2 U B1354 -110.863 -86.411 40.609 1.00170.03 O
ATOM 5 O5' U B1354 -113.148 -87.317 41.175 1.00171.86 O
ATOM 6 C5' U B1354 -114.181 -86.704 40.409 1.00172.32 C
ATOM 7 C4' U B1354 -115.550 -87.008 40.969 1.00173.40 C
ATOM 8 O4' U B1354 -115.469 -88.174 41.833 1.00173.78 O
ATOM 9 C3' U B1354 -116.180 -85.929 41.855 1.00173.56 C
ATOM 10 O3' U B1354 -116.802 -84.876 41.111 1.00173.64 O
ATOM 11 C2' U B1354 -117.151 -86.738 42.704 1.00174.57 C
ATOM 12 O2' U B1354 -118.314 -87.057 41.953 1.00175.45 O
ATOM 13 C1' U B1354 -116.355 -88.030 42.923 1.00174.44 C
ATOM 14 N1 U B1354 -115.560 -88.017 44.196 1.00173.99 N
ATOM 15 C2 U B1354 -116.162 -88.531 45.337 1.00174.71 C
ATOM 16 O2 U B1354 -117.298 -88.973 45.335 1.00175.66 O
ATOM 17 N3 U B1354 -115.397 -88.514 46.485 1.00174.30 N
ATOM 18 C4 U B1354 -114.111 -88.052 46.625 1.00173.27 C
ATOM 19 O4 U B1354 -113.565 -88.111 47.724 1.00173.06 O
ATOM 20 C5 U B1354 -113.550 -87.541 45.417 1.00172.58 C
ATOM 21 C6 U B1354 -114.266 -87.543 44.282 1.00172.95 C
ATOM 22 P C B1355 -117.315 -83.515 41.844 1.00147.40 P
ATOM 23 OP1 C B1355 -117.474 -82.479 40.781 1.00147.17 O
ATOM 24 OP2 C B1355 -116.386 -83.232 42.974 1.00146.72 O
ATOM 25 O5' C B1355 -118.749 -83.934 42.412 1.00148.61 O
TER
Atoms:
OP1: (-118.967,-95.184,53.490)
OP2: (-116.944,-94.138,52.344)
C3': (-117.323,-94.550,47.569)
C1': (-117.429,-92.311,48.172)
C5': (-117.792,-95.332,49.940)
O6: (-111.602,-90.830,49.007)
O4': (-118.050,-93.050,49.210)
C8: (-115.629,-91.837,49.903)
C2: (-113.507,-91.373,46.103)
C6: (-112.590,-91.092,48.322)
C5: (-113.897,-91.414,48.765)
C4: (-114.895,-91.689,47.839)
P: (-118.385,-94.489,52.319)
C4': (-118.190,-94.436,48.807)
C2': (-117.462,-93.182,46.933)
O2': (-118.738,-93.036,46.331)
N1: (-112.474,-91.094,46.947)
N2: (-113.196,-91.318,44.804)
N3: (-114.747,-91.686,46.489)
N7: (-114.376,-91.521,50.058)
N9: (-116.037,-91.978,48.590)
O5': (-118.721,-95.282,50.993)
O3': (-117.704,-95.612,46.733)
OP2: (-116.944,-94.138,52.344)
C3': (-117.323,-94.550,47.569)
C1': (-117.429,-92.311,48.172)
C5': (-117.792,-95.332,49.940)
O6: (-111.602,-90.830,49.007)
O4': (-118.050,-93.050,49.210)
C8: (-115.629,-91.837,49.903)
C2: (-113.507,-91.373,46.103)
C6: (-112.590,-91.092,48.322)
C5: (-113.897,-91.414,48.765)
C4: (-114.895,-91.689,47.839)
P: (-118.385,-94.489,52.319)
C4': (-118.190,-94.436,48.807)
C2': (-117.462,-93.182,46.933)
O2': (-118.738,-93.036,46.331)
N1: (-112.474,-91.094,46.947)
N2: (-113.196,-91.318,44.804)
N3: (-114.747,-91.686,46.489)
N7: (-114.376,-91.521,50.058)
N9: (-116.037,-91.978,48.590)
O5': (-118.721,-95.282,50.993)
O3': (-117.704,-95.612,46.733)
C4: (-114.111,-88.052,46.625)
N3: (-115.397,-88.514,46.485)
OP1: (-111.488,-86.887,43.038)
OP2: (-110.863,-86.411,40.609)
C2: (-116.162,-88.531,45.337)
C1': (-116.355,-88.030,42.923)
C3': (-116.180,-85.929,41.855)
O5': (-113.148,-87.317,41.175)
O4': (-115.469,-88.174,41.833)
C5': (-114.181,-86.704,40.409)
P: (-111.896,-86.464,41.672)
C4': (-115.550,-87.008,40.969)
C2': (-117.151,-86.738,42.704)
O2': (-118.314,-87.057,41.953)
N1: (-115.560,-88.017,44.196)
O4: (-113.565,-88.111,47.724)
O2: (-117.298,-88.973,45.335)
C6: (-114.266,-87.543,44.282)
C5: (-113.550,-87.541,45.417)
O3': (-116.802,-84.876,41.111)
N3: (-115.397,-88.514,46.485)
OP1: (-111.488,-86.887,43.038)
OP2: (-110.863,-86.411,40.609)
C2: (-116.162,-88.531,45.337)
C1': (-116.355,-88.030,42.923)
C3': (-116.180,-85.929,41.855)
O5': (-113.148,-87.317,41.175)
O4': (-115.469,-88.174,41.833)
C5': (-114.181,-86.704,40.409)
P: (-111.896,-86.464,41.672)
C4': (-115.550,-87.008,40.969)
C2': (-117.151,-86.738,42.704)
O2': (-118.314,-87.057,41.953)
N1: (-115.560,-88.017,44.196)
O4: (-113.565,-88.111,47.724)
O2: (-117.298,-88.973,45.335)
C6: (-114.266,-87.543,44.282)
C5: (-113.550,-87.541,45.417)
O3': (-116.802,-84.876,41.111)
Image (generated by PyMOL):