Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2H1M:A5:A6
Extra
PDB:
ATOM 1 O3' A A 4 -24.333 35.180 -4.236 1.00 26.88 O
ATOM 2 P G A 5 -23.841 34.440 -2.913 1.00 27.12 P
ATOM 3 OP1 G A 5 -24.180 35.314 -1.773 1.00 27.23 O
ATOM 4 OP2 G A 5 -22.436 34.004 -3.095 1.00 27.43 O
ATOM 5 O5' G A 5 -24.783 33.147 -2.899 1.00 28.36 O
ATOM 6 C5' G A 5 -24.216 31.851 -2.876 1.00 30.77 C
ATOM 7 C4' G A 5 -25.143 30.840 -3.512 1.00 32.57 C
ATOM 8 O4' G A 5 -24.795 30.628 -4.904 1.00 33.33 O
ATOM 9 C3' G A 5 -25.012 29.452 -2.925 1.00 33.69 C
ATOM 10 O3' G A 5 -25.737 29.361 -1.718 1.00 35.06 O
ATOM 11 C2' G A 5 -25.613 28.599 -4.035 1.00 33.89 C
ATOM 12 O2' G A 5 -27.023 28.691 -4.120 1.00 34.12 O
ATOM 13 C1' G A 5 -24.958 29.256 -5.243 1.00 33.93 C
ATOM 14 N9 G A 5 -23.665 28.646 -5.576 1.00 34.08 N
ATOM 15 C8 G A 5 -23.459 27.361 -6.040 1.00 34.12 C
ATOM 16 N7 G A 5 -22.205 27.069 -6.253 1.00 33.85 N
ATOM 17 C5 G A 5 -21.534 28.239 -5.910 1.00 33.93 C
ATOM 18 C6 G A 5 -20.149 28.539 -5.930 1.00 34.00 C
ATOM 19 O6 G A 5 -19.216 27.805 -6.268 1.00 34.07 O
ATOM 20 N1 G A 5 -19.869 29.840 -5.504 1.00 34.17 N
ATOM 21 C2 G A 5 -20.821 30.751 -5.102 1.00 34.17 C
ATOM 22 N2 G A 5 -20.371 31.961 -4.724 1.00 34.09 N
ATOM 23 N3 G A 5 -22.124 30.481 -5.077 1.00 33.92 N
ATOM 24 C4 G A 5 -22.412 29.216 -5.487 1.00 33.89 C
ATOM 25 P U A 6 -25.035 28.716 -0.433 1.00 36.16 P
ATOM 26 OP1 U A 6 -26.047 28.708 0.646 1.00 35.97 O
ATOM 27 OP2 U A 6 -23.746 29.413 -0.218 1.00 35.96 O
ATOM 28 O5' U A 6 -24.713 27.209 -0.891 1.00 36.92 O
TER
ATOM 1 O3' G B 5 -25.737 29.361 -1.718 1.00 35.06 O
ATOM 2 P U B 6 -25.035 28.716 -0.433 1.00 36.16 P
ATOM 3 OP1 U B 6 -26.047 28.708 0.646 1.00 35.97 O
ATOM 4 OP2 U B 6 -23.746 29.413 -0.218 1.00 35.96 O
ATOM 5 O5' U B 6 -24.713 27.209 -0.891 1.00 36.92 O
ATOM 6 C5' U B 6 -25.763 26.285 -1.197 1.00 38.36 C
ATOM 7 C4' U B 6 -25.241 25.030 -1.880 1.00 39.64 C
ATOM 8 O4' U B 6 -24.541 25.350 -3.112 1.00 39.72 O
ATOM 9 C3' U B 6 -24.205 24.244 -1.088 1.00 40.35 C
ATOM 10 O3' U B 6 -24.811 23.463 -0.077 1.00 41.70 O
ATOM 11 C2' U B 6 -23.561 23.404 -2.181 1.00 40.11 C
ATOM 12 O2' U B 6 -24.359 22.313 -2.607 1.00 39.85 O
ATOM 13 C1' U B 6 -23.436 24.470 -3.270 1.00 39.95 C
ATOM 14 N1 U B 6 -22.128 25.240 -3.216 1.00 39.99 N
ATOM 15 C2 U B 6 -20.938 24.603 -3.548 1.00 40.10 C
ATOM 16 O2 U B 6 -20.858 23.435 -3.890 1.00 40.21 O
ATOM 17 N3 U B 6 -19.809 25.387 -3.468 1.00 39.97 N
ATOM 18 C4 U B 6 -19.737 26.717 -3.098 1.00 39.96 C
ATOM 19 O4 U B 6 -18.647 27.279 -3.077 1.00 39.93 O
ATOM 20 C5 U B 6 -21.006 27.318 -2.761 1.00 40.10 C
ATOM 21 C6 U B 6 -22.122 26.575 -2.835 1.00 40.09 C
ATOM 22 P U B 7 -24.203 23.520 1.405 1.00 42.81 P
ATOM 23 OP1 U B 7 -25.225 22.975 2.325 1.00 42.77 O
ATOM 24 OP2 U B 7 -23.642 24.869 1.655 1.00 42.76 O
ATOM 25 O5' U B 7 -22.971 22.506 1.310 1.00 43.35 O
TER
ATOM 2 P G A 5 -23.841 34.440 -2.913 1.00 27.12 P
ATOM 3 OP1 G A 5 -24.180 35.314 -1.773 1.00 27.23 O
ATOM 4 OP2 G A 5 -22.436 34.004 -3.095 1.00 27.43 O
ATOM 5 O5' G A 5 -24.783 33.147 -2.899 1.00 28.36 O
ATOM 6 C5' G A 5 -24.216 31.851 -2.876 1.00 30.77 C
ATOM 7 C4' G A 5 -25.143 30.840 -3.512 1.00 32.57 C
ATOM 8 O4' G A 5 -24.795 30.628 -4.904 1.00 33.33 O
ATOM 9 C3' G A 5 -25.012 29.452 -2.925 1.00 33.69 C
ATOM 10 O3' G A 5 -25.737 29.361 -1.718 1.00 35.06 O
ATOM 11 C2' G A 5 -25.613 28.599 -4.035 1.00 33.89 C
ATOM 12 O2' G A 5 -27.023 28.691 -4.120 1.00 34.12 O
ATOM 13 C1' G A 5 -24.958 29.256 -5.243 1.00 33.93 C
ATOM 14 N9 G A 5 -23.665 28.646 -5.576 1.00 34.08 N
ATOM 15 C8 G A 5 -23.459 27.361 -6.040 1.00 34.12 C
ATOM 16 N7 G A 5 -22.205 27.069 -6.253 1.00 33.85 N
ATOM 17 C5 G A 5 -21.534 28.239 -5.910 1.00 33.93 C
ATOM 18 C6 G A 5 -20.149 28.539 -5.930 1.00 34.00 C
ATOM 19 O6 G A 5 -19.216 27.805 -6.268 1.00 34.07 O
ATOM 20 N1 G A 5 -19.869 29.840 -5.504 1.00 34.17 N
ATOM 21 C2 G A 5 -20.821 30.751 -5.102 1.00 34.17 C
ATOM 22 N2 G A 5 -20.371 31.961 -4.724 1.00 34.09 N
ATOM 23 N3 G A 5 -22.124 30.481 -5.077 1.00 33.92 N
ATOM 24 C4 G A 5 -22.412 29.216 -5.487 1.00 33.89 C
ATOM 25 P U A 6 -25.035 28.716 -0.433 1.00 36.16 P
ATOM 26 OP1 U A 6 -26.047 28.708 0.646 1.00 35.97 O
ATOM 27 OP2 U A 6 -23.746 29.413 -0.218 1.00 35.96 O
ATOM 28 O5' U A 6 -24.713 27.209 -0.891 1.00 36.92 O
TER
ATOM 1 O3' G B 5 -25.737 29.361 -1.718 1.00 35.06 O
ATOM 2 P U B 6 -25.035 28.716 -0.433 1.00 36.16 P
ATOM 3 OP1 U B 6 -26.047 28.708 0.646 1.00 35.97 O
ATOM 4 OP2 U B 6 -23.746 29.413 -0.218 1.00 35.96 O
ATOM 5 O5' U B 6 -24.713 27.209 -0.891 1.00 36.92 O
ATOM 6 C5' U B 6 -25.763 26.285 -1.197 1.00 38.36 C
ATOM 7 C4' U B 6 -25.241 25.030 -1.880 1.00 39.64 C
ATOM 8 O4' U B 6 -24.541 25.350 -3.112 1.00 39.72 O
ATOM 9 C3' U B 6 -24.205 24.244 -1.088 1.00 40.35 C
ATOM 10 O3' U B 6 -24.811 23.463 -0.077 1.00 41.70 O
ATOM 11 C2' U B 6 -23.561 23.404 -2.181 1.00 40.11 C
ATOM 12 O2' U B 6 -24.359 22.313 -2.607 1.00 39.85 O
ATOM 13 C1' U B 6 -23.436 24.470 -3.270 1.00 39.95 C
ATOM 14 N1 U B 6 -22.128 25.240 -3.216 1.00 39.99 N
ATOM 15 C2 U B 6 -20.938 24.603 -3.548 1.00 40.10 C
ATOM 16 O2 U B 6 -20.858 23.435 -3.890 1.00 40.21 O
ATOM 17 N3 U B 6 -19.809 25.387 -3.468 1.00 39.97 N
ATOM 18 C4 U B 6 -19.737 26.717 -3.098 1.00 39.96 C
ATOM 19 O4 U B 6 -18.647 27.279 -3.077 1.00 39.93 O
ATOM 20 C5 U B 6 -21.006 27.318 -2.761 1.00 40.10 C
ATOM 21 C6 U B 6 -22.122 26.575 -2.835 1.00 40.09 C
ATOM 22 P U B 7 -24.203 23.520 1.405 1.00 42.81 P
ATOM 23 OP1 U B 7 -25.225 22.975 2.325 1.00 42.77 O
ATOM 24 OP2 U B 7 -23.642 24.869 1.655 1.00 42.76 O
ATOM 25 O5' U B 7 -22.971 22.506 1.310 1.00 43.35 O
TER
Atoms:
OP1: (-24.180,35.314,-1.773)
OP2: (-22.436,34.004,-3.095)
C3': (-25.012,29.452,-2.925)
C1': (-24.958,29.256,-5.243)
C5': (-24.216,31.851,-2.876)
O6: (-19.216,27.805,-6.268)
O4': (-24.795,30.628,-4.904)
C8: (-23.459,27.361,-6.040)
C2: (-20.821,30.751,-5.102)
C6: (-20.149,28.539,-5.930)
C5: (-21.534,28.239,-5.910)
C4: (-22.412,29.216,-5.487)
P: (-23.841,34.440,-2.913)
C4': (-25.143,30.840,-3.512)
C2': (-25.613,28.599,-4.035)
O2': (-27.023,28.691,-4.120)
N1: (-19.869,29.840,-5.504)
N2: (-20.371,31.961,-4.724)
N3: (-22.124,30.481,-5.077)
N7: (-22.205,27.069,-6.253)
N9: (-23.665,28.646,-5.576)
O5': (-24.783,33.147,-2.899)
O3': (-25.737,29.361,-1.718)
OP2: (-22.436,34.004,-3.095)
C3': (-25.012,29.452,-2.925)
C1': (-24.958,29.256,-5.243)
C5': (-24.216,31.851,-2.876)
O6: (-19.216,27.805,-6.268)
O4': (-24.795,30.628,-4.904)
C8: (-23.459,27.361,-6.040)
C2: (-20.821,30.751,-5.102)
C6: (-20.149,28.539,-5.930)
C5: (-21.534,28.239,-5.910)
C4: (-22.412,29.216,-5.487)
P: (-23.841,34.440,-2.913)
C4': (-25.143,30.840,-3.512)
C2': (-25.613,28.599,-4.035)
O2': (-27.023,28.691,-4.120)
N1: (-19.869,29.840,-5.504)
N2: (-20.371,31.961,-4.724)
N3: (-22.124,30.481,-5.077)
N7: (-22.205,27.069,-6.253)
N9: (-23.665,28.646,-5.576)
O5': (-24.783,33.147,-2.899)
O3': (-25.737,29.361,-1.718)
C4: (-19.737,26.717,-3.098)
N3: (-19.809,25.387,-3.468)
OP1: (-26.047,28.708,0.646)
OP2: (-23.746,29.413,-0.218)
C2: (-20.938,24.603,-3.548)
C1': (-23.436,24.470,-3.270)
C3': (-24.205,24.244,-1.088)
O5': (-24.713,27.209,-0.891)
O4': (-24.541,25.350,-3.112)
C5': (-25.763,26.285,-1.197)
P: (-25.035,28.716,-0.433)
C4': (-25.241,25.030,-1.880)
C2': (-23.561,23.404,-2.181)
O2': (-24.359,22.313,-2.607)
N1: (-22.128,25.240,-3.216)
O4: (-18.647,27.279,-3.077)
O2: (-20.858,23.435,-3.890)
C6: (-22.122,26.575,-2.835)
C5: (-21.006,27.318,-2.761)
O3': (-24.811,23.463,-0.077)
N3: (-19.809,25.387,-3.468)
OP1: (-26.047,28.708,0.646)
OP2: (-23.746,29.413,-0.218)
C2: (-20.938,24.603,-3.548)
C1': (-23.436,24.470,-3.270)
C3': (-24.205,24.244,-1.088)
O5': (-24.713,27.209,-0.891)
O4': (-24.541,25.350,-3.112)
C5': (-25.763,26.285,-1.197)
P: (-25.035,28.716,-0.433)
C4': (-25.241,25.030,-1.880)
C2': (-23.561,23.404,-2.181)
O2': (-24.359,22.313,-2.607)
N1: (-22.128,25.240,-3.216)
O4: (-18.647,27.279,-3.077)
O2: (-20.858,23.435,-3.890)
C6: (-22.122,26.575,-2.835)
C5: (-21.006,27.318,-2.761)
O3': (-24.811,23.463,-0.077)
Image (generated by PyMOL):