Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2827:A2825
Extra
PDB:
ATOM 1 O3' U A2826 -24.146 -95.225 -43.737 1.00 17.51 O
ATOM 2 P G A2827 -23.962 -93.695 -44.212 1.00 0.01 P
ATOM 3 OP1 G A2827 -25.102 -93.364 -45.100 1.00 0.01 O
ATOM 4 OP2 G A2827 -22.575 -93.580 -44.744 1.00 0.01 O
ATOM 5 O5' G A2827 -24.097 -92.853 -42.849 1.00 0.01 O
ATOM 6 C5' G A2827 -25.274 -92.913 -42.060 1.00 0.01 C
ATOM 7 C4' G A2827 -25.363 -91.769 -41.094 1.00 0.01 C
ATOM 8 O4' G A2827 -24.296 -91.825 -40.124 1.00 0.01 O
ATOM 9 C3' G A2827 -25.259 -90.397 -41.696 1.00 0.01 C
ATOM 10 O3' G A2827 -26.502 -89.990 -42.210 1.00 0.01 O
ATOM 11 C2' G A2827 -24.787 -89.540 -40.519 1.00 0.01 C
ATOM 12 O2' G A2827 -25.885 -89.133 -39.720 1.00 0.01 O
ATOM 13 C1' G A2827 -23.938 -90.519 -39.716 1.00 0.01 C
ATOM 14 N9 G A2827 -22.491 -90.344 -39.958 1.00 0.01 N
ATOM 15 C8 G A2827 -21.899 -90.703 -41.148 1.00 0.01 C
ATOM 16 N7 G A2827 -20.627 -90.502 -41.177 1.00 0.01 N
ATOM 17 C5 G A2827 -20.336 -89.993 -39.914 1.00 0.01 C
ATOM 18 C6 G A2827 -19.090 -89.603 -39.365 1.00 0.01 C
ATOM 19 O6 G A2827 -17.974 -89.624 -39.866 1.00 0.01 O
ATOM 20 N1 G A2827 -19.181 -89.159 -38.080 1.00 0.01 N
ATOM 21 C2 G A2827 -20.332 -89.073 -37.382 1.00 0.01 C
ATOM 22 N2 G A2827 -20.136 -88.579 -36.148 1.00 0.01 N
ATOM 23 N3 G A2827 -21.523 -89.433 -37.862 1.00 0.01 N
ATOM 24 C4 G A2827 -21.466 -89.892 -39.137 1.00 0.01 C
ATOM 25 P A A2828 -26.604 -89.070 -43.498 1.00 0.01 P
ATOM 26 OP1 A A2828 -28.007 -89.149 -43.968 1.00 0.01 O
ATOM 27 OP2 A A2828 -25.499 -89.481 -44.415 1.00 0.01 O
ATOM 28 O5' A A2828 -26.317 -87.629 -42.899 1.00 0.01 O
TER
ATOM 1 O3' G B2824 -24.868 -93.686 -36.446 1.00 0.01 O
ATOM 2 P U B2825 -24.668 -95.276 -36.429 1.00 0.01 P
ATOM 3 OP1 U B2825 -25.935 -95.875 -36.906 1.00 0.01 O
ATOM 4 OP2 U B2825 -24.145 -95.640 -35.065 1.00 0.01 O
ATOM 5 O5' U B2825 -23.522 -95.475 -37.515 1.00 0.01 O
ATOM 6 C5' U B2825 -23.491 -94.675 -38.686 1.00 0.01 C
ATOM 7 C4' U B2825 -22.087 -94.285 -39.078 1.00 0.01 C
ATOM 8 O4' U B2825 -21.736 -93.048 -38.425 1.00 0.01 O
ATOM 9 C3' U B2825 -20.994 -95.294 -38.720 1.00 0.01 C
ATOM 10 O3' U B2825 -20.077 -95.435 -39.804 1.00 0.01 O
ATOM 11 C2' U B2825 -20.277 -94.652 -37.561 1.00 0.01 C
ATOM 12 O2' U B2825 -18.914 -94.969 -37.497 1.00 0.01 O
ATOM 13 C1' U B2825 -20.478 -93.173 -37.827 1.00 0.01 C
ATOM 14 N1 U B2825 -20.456 -92.385 -36.602 1.00 0.22 N
ATOM 15 C2 U B2825 -19.227 -91.939 -36.320 1.00 0.22 C
ATOM 16 O2 U B2825 -18.353 -92.135 -37.106 1.00 0.22 O
ATOM 17 N3 U B2825 -19.053 -91.241 -35.163 1.00 0.22 N
ATOM 18 C4 U B2825 -20.016 -90.961 -34.209 1.00 0.22 C
ATOM 19 O4 U B2825 -19.706 -90.291 -33.186 1.00 0.22 O
ATOM 20 C5 U B2825 -21.307 -91.502 -34.577 1.00 0.22 C
ATOM 21 C6 U B2825 -21.473 -92.186 -35.721 1.00 0.22 C
ATOM 22 P U B2826 -19.734 -96.889 -40.402 1.00 17.51 P
ATOM 23 OP1 U B2826 -19.992 -97.884 -39.341 1.00 17.51 O
ATOM 24 OP2 U B2826 -18.377 -96.797 -40.976 1.00 17.51 O
ATOM 25 O5' U B2826 -20.799 -97.059 -41.562 1.00 17.51 O
TER
ATOM 2 P G A2827 -23.962 -93.695 -44.212 1.00 0.01 P
ATOM 3 OP1 G A2827 -25.102 -93.364 -45.100 1.00 0.01 O
ATOM 4 OP2 G A2827 -22.575 -93.580 -44.744 1.00 0.01 O
ATOM 5 O5' G A2827 -24.097 -92.853 -42.849 1.00 0.01 O
ATOM 6 C5' G A2827 -25.274 -92.913 -42.060 1.00 0.01 C
ATOM 7 C4' G A2827 -25.363 -91.769 -41.094 1.00 0.01 C
ATOM 8 O4' G A2827 -24.296 -91.825 -40.124 1.00 0.01 O
ATOM 9 C3' G A2827 -25.259 -90.397 -41.696 1.00 0.01 C
ATOM 10 O3' G A2827 -26.502 -89.990 -42.210 1.00 0.01 O
ATOM 11 C2' G A2827 -24.787 -89.540 -40.519 1.00 0.01 C
ATOM 12 O2' G A2827 -25.885 -89.133 -39.720 1.00 0.01 O
ATOM 13 C1' G A2827 -23.938 -90.519 -39.716 1.00 0.01 C
ATOM 14 N9 G A2827 -22.491 -90.344 -39.958 1.00 0.01 N
ATOM 15 C8 G A2827 -21.899 -90.703 -41.148 1.00 0.01 C
ATOM 16 N7 G A2827 -20.627 -90.502 -41.177 1.00 0.01 N
ATOM 17 C5 G A2827 -20.336 -89.993 -39.914 1.00 0.01 C
ATOM 18 C6 G A2827 -19.090 -89.603 -39.365 1.00 0.01 C
ATOM 19 O6 G A2827 -17.974 -89.624 -39.866 1.00 0.01 O
ATOM 20 N1 G A2827 -19.181 -89.159 -38.080 1.00 0.01 N
ATOM 21 C2 G A2827 -20.332 -89.073 -37.382 1.00 0.01 C
ATOM 22 N2 G A2827 -20.136 -88.579 -36.148 1.00 0.01 N
ATOM 23 N3 G A2827 -21.523 -89.433 -37.862 1.00 0.01 N
ATOM 24 C4 G A2827 -21.466 -89.892 -39.137 1.00 0.01 C
ATOM 25 P A A2828 -26.604 -89.070 -43.498 1.00 0.01 P
ATOM 26 OP1 A A2828 -28.007 -89.149 -43.968 1.00 0.01 O
ATOM 27 OP2 A A2828 -25.499 -89.481 -44.415 1.00 0.01 O
ATOM 28 O5' A A2828 -26.317 -87.629 -42.899 1.00 0.01 O
TER
ATOM 1 O3' G B2824 -24.868 -93.686 -36.446 1.00 0.01 O
ATOM 2 P U B2825 -24.668 -95.276 -36.429 1.00 0.01 P
ATOM 3 OP1 U B2825 -25.935 -95.875 -36.906 1.00 0.01 O
ATOM 4 OP2 U B2825 -24.145 -95.640 -35.065 1.00 0.01 O
ATOM 5 O5' U B2825 -23.522 -95.475 -37.515 1.00 0.01 O
ATOM 6 C5' U B2825 -23.491 -94.675 -38.686 1.00 0.01 C
ATOM 7 C4' U B2825 -22.087 -94.285 -39.078 1.00 0.01 C
ATOM 8 O4' U B2825 -21.736 -93.048 -38.425 1.00 0.01 O
ATOM 9 C3' U B2825 -20.994 -95.294 -38.720 1.00 0.01 C
ATOM 10 O3' U B2825 -20.077 -95.435 -39.804 1.00 0.01 O
ATOM 11 C2' U B2825 -20.277 -94.652 -37.561 1.00 0.01 C
ATOM 12 O2' U B2825 -18.914 -94.969 -37.497 1.00 0.01 O
ATOM 13 C1' U B2825 -20.478 -93.173 -37.827 1.00 0.01 C
ATOM 14 N1 U B2825 -20.456 -92.385 -36.602 1.00 0.22 N
ATOM 15 C2 U B2825 -19.227 -91.939 -36.320 1.00 0.22 C
ATOM 16 O2 U B2825 -18.353 -92.135 -37.106 1.00 0.22 O
ATOM 17 N3 U B2825 -19.053 -91.241 -35.163 1.00 0.22 N
ATOM 18 C4 U B2825 -20.016 -90.961 -34.209 1.00 0.22 C
ATOM 19 O4 U B2825 -19.706 -90.291 -33.186 1.00 0.22 O
ATOM 20 C5 U B2825 -21.307 -91.502 -34.577 1.00 0.22 C
ATOM 21 C6 U B2825 -21.473 -92.186 -35.721 1.00 0.22 C
ATOM 22 P U B2826 -19.734 -96.889 -40.402 1.00 17.51 P
ATOM 23 OP1 U B2826 -19.992 -97.884 -39.341 1.00 17.51 O
ATOM 24 OP2 U B2826 -18.377 -96.797 -40.976 1.00 17.51 O
ATOM 25 O5' U B2826 -20.799 -97.059 -41.562 1.00 17.51 O
TER
Atoms:
OP1: (-25.102,-93.364,-45.100)
OP2: (-22.575,-93.580,-44.744)
C3': (-25.259,-90.397,-41.696)
C1': (-23.938,-90.519,-39.716)
C5': (-25.274,-92.913,-42.060)
O6: (-17.974,-89.624,-39.866)
O4': (-24.296,-91.825,-40.124)
C8: (-21.899,-90.703,-41.148)
C2: (-20.332,-89.073,-37.382)
C6: (-19.090,-89.603,-39.365)
C5: (-20.336,-89.993,-39.914)
C4: (-21.466,-89.892,-39.137)
P: (-23.962,-93.695,-44.212)
C4': (-25.363,-91.769,-41.094)
C2': (-24.787,-89.540,-40.519)
O2': (-25.885,-89.133,-39.720)
N1: (-19.181,-89.159,-38.080)
N2: (-20.136,-88.579,-36.148)
N3: (-21.523,-89.433,-37.862)
N7: (-20.627,-90.502,-41.177)
N9: (-22.491,-90.344,-39.958)
O5': (-24.097,-92.853,-42.849)
O3': (-26.502,-89.990,-42.210)
OP2: (-22.575,-93.580,-44.744)
C3': (-25.259,-90.397,-41.696)
C1': (-23.938,-90.519,-39.716)
C5': (-25.274,-92.913,-42.060)
O6: (-17.974,-89.624,-39.866)
O4': (-24.296,-91.825,-40.124)
C8: (-21.899,-90.703,-41.148)
C2: (-20.332,-89.073,-37.382)
C6: (-19.090,-89.603,-39.365)
C5: (-20.336,-89.993,-39.914)
C4: (-21.466,-89.892,-39.137)
P: (-23.962,-93.695,-44.212)
C4': (-25.363,-91.769,-41.094)
C2': (-24.787,-89.540,-40.519)
O2': (-25.885,-89.133,-39.720)
N1: (-19.181,-89.159,-38.080)
N2: (-20.136,-88.579,-36.148)
N3: (-21.523,-89.433,-37.862)
N7: (-20.627,-90.502,-41.177)
N9: (-22.491,-90.344,-39.958)
O5': (-24.097,-92.853,-42.849)
O3': (-26.502,-89.990,-42.210)
C4: (-20.016,-90.961,-34.209)
N3: (-19.053,-91.241,-35.163)
OP1: (-25.935,-95.875,-36.906)
OP2: (-24.145,-95.640,-35.065)
C2: (-19.227,-91.939,-36.320)
C1': (-20.478,-93.173,-37.827)
C3': (-20.994,-95.294,-38.720)
O5': (-23.522,-95.475,-37.515)
O4': (-21.736,-93.048,-38.425)
C5': (-23.491,-94.675,-38.686)
P: (-24.668,-95.276,-36.429)
C4': (-22.087,-94.285,-39.078)
C2': (-20.277,-94.652,-37.561)
O2': (-18.914,-94.969,-37.497)
N1: (-20.456,-92.385,-36.602)
O4: (-19.706,-90.291,-33.186)
O2: (-18.353,-92.135,-37.106)
C6: (-21.473,-92.186,-35.721)
C5: (-21.307,-91.502,-34.577)
O3': (-20.077,-95.435,-39.804)
N3: (-19.053,-91.241,-35.163)
OP1: (-25.935,-95.875,-36.906)
OP2: (-24.145,-95.640,-35.065)
C2: (-19.227,-91.939,-36.320)
C1': (-20.478,-93.173,-37.827)
C3': (-20.994,-95.294,-38.720)
O5': (-23.522,-95.475,-37.515)
O4': (-21.736,-93.048,-38.425)
C5': (-23.491,-94.675,-38.686)
P: (-24.668,-95.276,-36.429)
C4': (-22.087,-94.285,-39.078)
C2': (-20.277,-94.652,-37.561)
O2': (-18.914,-94.969,-37.497)
N1: (-20.456,-92.385,-36.602)
O4: (-19.706,-90.291,-33.186)
O2: (-18.353,-92.135,-37.106)
C6: (-21.473,-92.186,-35.721)
C5: (-21.307,-91.502,-34.577)
O3': (-20.077,-95.435,-39.804)
Image (generated by PyMOL):