Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X53:X51
Extra
PDB:
ATOM 1 O3' C A 52 -17.334 60.893 12.337 1.00 55.61 O
ATOM 2 P G A 53 -15.756 60.775 12.600 1.00 56.48 P
ATOM 3 OP1 G A 53 -15.593 60.377 14.018 1.00 56.36 O
ATOM 4 OP2 G A 53 -15.106 62.010 12.097 1.00 56.40 O
ATOM 5 O5' G A 53 -15.286 59.569 11.653 1.00 56.38 O
ATOM 6 C5' G A 53 -15.708 58.229 11.903 1.00 56.46 C
ATOM 7 C4' G A 53 -15.043 57.261 10.943 1.00 56.32 C
ATOM 8 O4' G A 53 -15.361 57.597 9.563 1.00 56.32 O
ATOM 9 C3' G A 53 -13.521 57.250 10.968 1.00 56.23 C
ATOM 10 O3' G A 53 -13.010 56.503 12.075 1.00 56.03 O
ATOM 11 C2' G A 53 -13.245 56.577 9.630 1.00 56.01 C
ATOM 12 O2' G A 53 -13.504 55.184 9.664 1.00 56.06 O
ATOM 13 C1' G A 53 -14.241 57.314 8.733 1.00 55.73 C
ATOM 14 N9 G A 53 -13.686 58.556 8.186 1.00 55.25 N
ATOM 15 C8 G A 53 -14.028 59.839 8.542 1.00 55.04 C
ATOM 16 N7 G A 53 -13.363 60.762 7.907 1.00 55.03 N
ATOM 17 C5 G A 53 -12.515 60.051 7.069 1.00 55.16 C
ATOM 18 C6 G A 53 -11.549 60.519 6.137 1.00 55.17 C
ATOM 19 O6 G A 53 -11.255 61.692 5.867 1.00 55.23 O
ATOM 20 N1 G A 53 -10.893 59.472 5.483 1.00 54.99 N
ATOM 21 C2 G A 53 -11.143 58.134 5.704 1.00 54.89 C
ATOM 22 N2 G A 53 -10.416 57.266 4.984 1.00 54.60 N
ATOM 23 N3 G A 53 -12.046 57.684 6.577 1.00 54.82 N
ATOM 24 C4 G A 53 -12.698 58.690 7.227 1.00 55.19 C
ATOM 25 P G A 54 -11.672 56.979 12.823 1.00 55.71 P
ATOM 26 OP1 G A 54 -11.500 56.085 13.987 1.00 55.53 O
ATOM 27 OP2 G A 54 -11.727 58.445 13.024 1.00 55.65 O
ATOM 28 O5' G A 54 -10.510 56.703 11.755 1.00 55.63 O
TER
ATOM 1 O3' A B 50 -19.036 55.065 7.811 1.00 50.68 O
ATOM 2 P U B 51 -19.738 56.172 6.881 1.00 51.56 P
ATOM 3 OP1 U B 51 -20.804 56.807 7.690 1.00 52.22 O
ATOM 4 OP2 U B 51 -20.086 55.563 5.574 1.00 51.47 O
ATOM 5 O5' U B 51 -18.554 57.222 6.643 1.00 51.53 O
ATOM 6 C5' U B 51 -18.312 58.265 7.579 1.00 52.07 C
ATOM 7 C4' U B 51 -17.486 59.360 6.935 1.00 52.55 C
ATOM 8 O4' U B 51 -16.249 58.765 6.484 1.00 52.40 O
ATOM 9 C3' U B 51 -18.124 60.008 5.701 1.00 53.16 C
ATOM 10 O3' U B 51 -18.883 61.228 5.977 1.00 54.16 O
ATOM 11 C2' U B 51 -16.993 60.125 4.663 1.00 52.89 C
ATOM 12 O2' U B 51 -16.618 61.454 4.347 1.00 53.13 O
ATOM 13 C1' U B 51 -15.809 59.384 5.292 1.00 52.36 C
ATOM 14 N1 U B 51 -15.204 58.349 4.378 1.00 51.74 N
ATOM 15 C2 U B 51 -14.049 58.657 3.670 1.00 51.42 C
ATOM 16 O2 U B 51 -13.475 59.730 3.742 1.00 50.83 O
ATOM 17 N3 U B 51 -13.580 57.650 2.859 1.00 51.45 N
ATOM 18 C4 U B 51 -14.137 56.392 2.684 1.00 51.66 C
ATOM 19 O4 U B 51 -13.604 55.592 1.920 1.00 51.83 O
ATOM 20 C5 U B 51 -15.336 56.143 3.450 1.00 51.61 C
ATOM 21 C6 U B 51 -15.813 57.109 4.249 1.00 51.54 C
ATOM 22 P C B 52 -18.406 62.550 6.762 1.00 54.94 P
ATOM 23 OP1 C B 52 -19.345 63.620 6.356 1.00 54.74 O
ATOM 24 OP2 C B 52 -16.950 62.761 6.569 1.00 54.81 O
ATOM 25 O5' C B 52 -18.708 62.205 8.299 1.00 54.47 O
TER
ATOM 2 P G A 53 -15.756 60.775 12.600 1.00 56.48 P
ATOM 3 OP1 G A 53 -15.593 60.377 14.018 1.00 56.36 O
ATOM 4 OP2 G A 53 -15.106 62.010 12.097 1.00 56.40 O
ATOM 5 O5' G A 53 -15.286 59.569 11.653 1.00 56.38 O
ATOM 6 C5' G A 53 -15.708 58.229 11.903 1.00 56.46 C
ATOM 7 C4' G A 53 -15.043 57.261 10.943 1.00 56.32 C
ATOM 8 O4' G A 53 -15.361 57.597 9.563 1.00 56.32 O
ATOM 9 C3' G A 53 -13.521 57.250 10.968 1.00 56.23 C
ATOM 10 O3' G A 53 -13.010 56.503 12.075 1.00 56.03 O
ATOM 11 C2' G A 53 -13.245 56.577 9.630 1.00 56.01 C
ATOM 12 O2' G A 53 -13.504 55.184 9.664 1.00 56.06 O
ATOM 13 C1' G A 53 -14.241 57.314 8.733 1.00 55.73 C
ATOM 14 N9 G A 53 -13.686 58.556 8.186 1.00 55.25 N
ATOM 15 C8 G A 53 -14.028 59.839 8.542 1.00 55.04 C
ATOM 16 N7 G A 53 -13.363 60.762 7.907 1.00 55.03 N
ATOM 17 C5 G A 53 -12.515 60.051 7.069 1.00 55.16 C
ATOM 18 C6 G A 53 -11.549 60.519 6.137 1.00 55.17 C
ATOM 19 O6 G A 53 -11.255 61.692 5.867 1.00 55.23 O
ATOM 20 N1 G A 53 -10.893 59.472 5.483 1.00 54.99 N
ATOM 21 C2 G A 53 -11.143 58.134 5.704 1.00 54.89 C
ATOM 22 N2 G A 53 -10.416 57.266 4.984 1.00 54.60 N
ATOM 23 N3 G A 53 -12.046 57.684 6.577 1.00 54.82 N
ATOM 24 C4 G A 53 -12.698 58.690 7.227 1.00 55.19 C
ATOM 25 P G A 54 -11.672 56.979 12.823 1.00 55.71 P
ATOM 26 OP1 G A 54 -11.500 56.085 13.987 1.00 55.53 O
ATOM 27 OP2 G A 54 -11.727 58.445 13.024 1.00 55.65 O
ATOM 28 O5' G A 54 -10.510 56.703 11.755 1.00 55.63 O
TER
ATOM 1 O3' A B 50 -19.036 55.065 7.811 1.00 50.68 O
ATOM 2 P U B 51 -19.738 56.172 6.881 1.00 51.56 P
ATOM 3 OP1 U B 51 -20.804 56.807 7.690 1.00 52.22 O
ATOM 4 OP2 U B 51 -20.086 55.563 5.574 1.00 51.47 O
ATOM 5 O5' U B 51 -18.554 57.222 6.643 1.00 51.53 O
ATOM 6 C5' U B 51 -18.312 58.265 7.579 1.00 52.07 C
ATOM 7 C4' U B 51 -17.486 59.360 6.935 1.00 52.55 C
ATOM 8 O4' U B 51 -16.249 58.765 6.484 1.00 52.40 O
ATOM 9 C3' U B 51 -18.124 60.008 5.701 1.00 53.16 C
ATOM 10 O3' U B 51 -18.883 61.228 5.977 1.00 54.16 O
ATOM 11 C2' U B 51 -16.993 60.125 4.663 1.00 52.89 C
ATOM 12 O2' U B 51 -16.618 61.454 4.347 1.00 53.13 O
ATOM 13 C1' U B 51 -15.809 59.384 5.292 1.00 52.36 C
ATOM 14 N1 U B 51 -15.204 58.349 4.378 1.00 51.74 N
ATOM 15 C2 U B 51 -14.049 58.657 3.670 1.00 51.42 C
ATOM 16 O2 U B 51 -13.475 59.730 3.742 1.00 50.83 O
ATOM 17 N3 U B 51 -13.580 57.650 2.859 1.00 51.45 N
ATOM 18 C4 U B 51 -14.137 56.392 2.684 1.00 51.66 C
ATOM 19 O4 U B 51 -13.604 55.592 1.920 1.00 51.83 O
ATOM 20 C5 U B 51 -15.336 56.143 3.450 1.00 51.61 C
ATOM 21 C6 U B 51 -15.813 57.109 4.249 1.00 51.54 C
ATOM 22 P C B 52 -18.406 62.550 6.762 1.00 54.94 P
ATOM 23 OP1 C B 52 -19.345 63.620 6.356 1.00 54.74 O
ATOM 24 OP2 C B 52 -16.950 62.761 6.569 1.00 54.81 O
ATOM 25 O5' C B 52 -18.708 62.205 8.299 1.00 54.47 O
TER
Atoms:
OP1: (-15.593,60.377,14.018)
OP2: (-15.106,62.010,12.097)
C3': (-13.521,57.250,10.968)
C1': (-14.241,57.314,8.733)
C5': (-15.708,58.229,11.903)
O6: (-11.255,61.692,5.867)
O4': (-15.361,57.597,9.563)
C8: (-14.028,59.839,8.542)
C2: (-11.143,58.134,5.704)
C6: (-11.549,60.519,6.137)
C5: (-12.515,60.051,7.069)
C4: (-12.698,58.690,7.227)
P: (-15.756,60.775,12.600)
C4': (-15.043,57.261,10.943)
C2': (-13.245,56.577,9.630)
O2': (-13.504,55.184,9.664)
N1: (-10.893,59.472,5.483)
N2: (-10.416,57.266,4.984)
N3: (-12.046,57.684,6.577)
N7: (-13.363,60.762,7.907)
N9: (-13.686,58.556,8.186)
O5': (-15.286,59.569,11.653)
O3': (-13.010,56.503,12.075)
OP2: (-15.106,62.010,12.097)
C3': (-13.521,57.250,10.968)
C1': (-14.241,57.314,8.733)
C5': (-15.708,58.229,11.903)
O6: (-11.255,61.692,5.867)
O4': (-15.361,57.597,9.563)
C8: (-14.028,59.839,8.542)
C2: (-11.143,58.134,5.704)
C6: (-11.549,60.519,6.137)
C5: (-12.515,60.051,7.069)
C4: (-12.698,58.690,7.227)
P: (-15.756,60.775,12.600)
C4': (-15.043,57.261,10.943)
C2': (-13.245,56.577,9.630)
O2': (-13.504,55.184,9.664)
N1: (-10.893,59.472,5.483)
N2: (-10.416,57.266,4.984)
N3: (-12.046,57.684,6.577)
N7: (-13.363,60.762,7.907)
N9: (-13.686,58.556,8.186)
O5': (-15.286,59.569,11.653)
O3': (-13.010,56.503,12.075)
C4: (-14.137,56.392,2.684)
N3: (-13.580,57.650,2.859)
OP1: (-20.804,56.807,7.690)
OP2: (-20.086,55.563,5.574)
C2: (-14.049,58.657,3.670)
C1': (-15.809,59.384,5.292)
C3': (-18.124,60.008,5.701)
O5': (-18.554,57.222,6.643)
O4': (-16.249,58.765,6.484)
C5': (-18.312,58.265,7.579)
P: (-19.738,56.172,6.881)
C4': (-17.486,59.360,6.935)
C2': (-16.993,60.125,4.663)
O2': (-16.618,61.454,4.347)
N1: (-15.204,58.349,4.378)
O4: (-13.604,55.592,1.920)
O2: (-13.475,59.730,3.742)
C6: (-15.813,57.109,4.249)
C5: (-15.336,56.143,3.450)
O3': (-18.883,61.228,5.977)
N3: (-13.580,57.650,2.859)
OP1: (-20.804,56.807,7.690)
OP2: (-20.086,55.563,5.574)
C2: (-14.049,58.657,3.670)
C1': (-15.809,59.384,5.292)
C3': (-18.124,60.008,5.701)
O5': (-18.554,57.222,6.643)
O4': (-16.249,58.765,6.484)
C5': (-18.312,58.265,7.579)
P: (-19.738,56.172,6.881)
C4': (-17.486,59.360,6.935)
C2': (-16.993,60.125,4.663)
O2': (-16.618,61.454,4.347)
N1: (-15.204,58.349,4.378)
O4: (-13.604,55.592,1.920)
O2: (-13.475,59.730,3.742)
C6: (-15.813,57.109,4.249)
C5: (-15.336,56.143,3.450)
O3': (-18.883,61.228,5.977)
Image (generated by PyMOL):