Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:A41:A39
Extra
PDB:
ATOM 1 O3' U A 40 -10.400 3.378 14.117 1.00 48.98 O
ATOM 2 P G A 41 -9.525 2.240 13.363 1.00 41.94 P
ATOM 3 OP1 G A 41 -8.274 2.182 14.115 1.00 42.28 O
ATOM 4 OP2 G A 41 -9.551 2.540 11.907 1.00 35.56 O
ATOM 5 O5' G A 41 -10.522 0.970 13.484 1.00 36.33 O
ATOM 6 C5' G A 41 -10.809 0.275 14.705 1.00 34.52 C
ATOM 7 C4' G A 41 -11.476 -1.061 14.405 1.00 38.29 C
ATOM 8 O4' G A 41 -12.586 -0.912 13.467 1.00 38.78 O
ATOM 9 C3' G A 41 -10.568 -2.044 13.663 1.00 36.94 C
ATOM 10 O3' G A 41 -9.579 -2.539 14.639 1.00 35.99 O
ATOM 11 C2' G A 41 -11.595 -2.995 13.018 1.00 33.48 C
ATOM 12 O2' G A 41 -12.237 -3.765 13.997 1.00 35.88 O
ATOM 13 C1' G A 41 -12.679 -2.003 12.553 1.00 36.64 C
ATOM 14 N9 G A 41 -12.373 -1.559 11.204 1.00 32.73 N
ATOM 15 C8 G A 41 -11.635 -0.456 10.853 1.00 31.61 C
ATOM 16 N7 G A 41 -11.493 -0.355 9.564 1.00 34.15 N
ATOM 17 C5 G A 41 -12.142 -1.455 9.035 1.00 30.91 C
ATOM 18 C6 G A 41 -12.283 -1.837 7.690 1.00 31.47 C
ATOM 19 O6 G A 41 -11.822 -1.246 6.672 1.00 30.59 O
ATOM 20 N1 G A 41 -13.028 -3.010 7.574 1.00 31.88 N
ATOM 21 C2 G A 41 -13.547 -3.731 8.620 1.00 32.54 C
ATOM 22 N2 G A 41 -14.214 -4.851 8.286 1.00 34.81 N
ATOM 23 N3 G A 41 -13.420 -3.381 9.914 1.00 33.61 N
ATOM 24 C4 G A 41 -12.705 -2.212 10.019 1.00 32.72 C
ATOM 25 P A A 42 -8.304 -3.232 13.978 1.00 39.43 P
ATOM 26 OP1 A A 42 -7.171 -2.296 13.848 1.00 42.57 O
ATOM 27 OP2 A A 42 -8.790 -4.063 12.836 1.00 40.13 O
ATOM 28 O5' A A 42 -8.162 -4.385 15.003 1.00 43.12 O
TER
ATOM 1 O3' U B 38 -17.079 -0.838 13.355 1.00 45.56 O
ATOM 2 P U B 39 -17.418 0.733 13.520 1.00 35.53 P
ATOM 3 OP1 U B 39 -16.934 1.013 14.889 1.00 30.76 O
ATOM 4 OP2 U B 39 -18.840 0.750 13.085 1.00 43.15 O
ATOM 5 O5' U B 39 -16.558 1.494 12.417 1.00 33.66 O
ATOM 6 C5' U B 39 -15.143 1.644 12.656 1.00 38.72 C
ATOM 7 C4' U B 39 -14.537 1.764 11.254 1.00 40.77 C
ATOM 8 O4' U B 39 -14.692 0.425 10.731 1.00 39.59 O
ATOM 9 C3' U B 39 -15.337 2.608 10.273 1.00 45.94 C
ATOM 10 O3' U B 39 -14.563 3.554 9.450 1.00 45.97 O
ATOM 11 C2' U B 39 -16.058 1.585 9.392 1.00 39.10 C
ATOM 12 O2' U B 39 -16.204 2.122 8.095 1.00 42.21 O
ATOM 13 C1' U B 39 -15.067 0.452 9.363 1.00 36.80 C
ATOM 14 N1 U B 39 -15.800 -0.795 9.006 1.00 34.66 N
ATOM 15 C2 U B 39 -15.855 -1.190 7.696 1.00 36.27 C
ATOM 16 O2 U B 39 -15.271 -0.590 6.809 1.00 39.22 O
ATOM 17 N3 U B 39 -16.591 -2.323 7.458 1.00 26.64 N
ATOM 18 C4 U B 39 -17.295 -3.014 8.410 1.00 33.97 C
ATOM 19 O4 U B 39 -17.907 -4.012 8.050 1.00 41.01 O
ATOM 20 C5 U B 39 -17.218 -2.565 9.762 1.00 34.72 C
ATOM 21 C6 U B 39 -16.473 -1.482 9.998 1.00 36.34 C
ATOM 22 P U B 40 -14.233 4.978 10.099 1.00 57.91 P
ATOM 23 OP1 U B 40 -15.501 5.609 10.526 1.00 57.01 O
ATOM 24 OP2 U B 40 -13.390 5.624 9.094 1.00 61.41 O
ATOM 25 O5' U B 40 -13.358 4.750 11.430 1.00 48.08 O
TER
ATOM 2 P G A 41 -9.525 2.240 13.363 1.00 41.94 P
ATOM 3 OP1 G A 41 -8.274 2.182 14.115 1.00 42.28 O
ATOM 4 OP2 G A 41 -9.551 2.540 11.907 1.00 35.56 O
ATOM 5 O5' G A 41 -10.522 0.970 13.484 1.00 36.33 O
ATOM 6 C5' G A 41 -10.809 0.275 14.705 1.00 34.52 C
ATOM 7 C4' G A 41 -11.476 -1.061 14.405 1.00 38.29 C
ATOM 8 O4' G A 41 -12.586 -0.912 13.467 1.00 38.78 O
ATOM 9 C3' G A 41 -10.568 -2.044 13.663 1.00 36.94 C
ATOM 10 O3' G A 41 -9.579 -2.539 14.639 1.00 35.99 O
ATOM 11 C2' G A 41 -11.595 -2.995 13.018 1.00 33.48 C
ATOM 12 O2' G A 41 -12.237 -3.765 13.997 1.00 35.88 O
ATOM 13 C1' G A 41 -12.679 -2.003 12.553 1.00 36.64 C
ATOM 14 N9 G A 41 -12.373 -1.559 11.204 1.00 32.73 N
ATOM 15 C8 G A 41 -11.635 -0.456 10.853 1.00 31.61 C
ATOM 16 N7 G A 41 -11.493 -0.355 9.564 1.00 34.15 N
ATOM 17 C5 G A 41 -12.142 -1.455 9.035 1.00 30.91 C
ATOM 18 C6 G A 41 -12.283 -1.837 7.690 1.00 31.47 C
ATOM 19 O6 G A 41 -11.822 -1.246 6.672 1.00 30.59 O
ATOM 20 N1 G A 41 -13.028 -3.010 7.574 1.00 31.88 N
ATOM 21 C2 G A 41 -13.547 -3.731 8.620 1.00 32.54 C
ATOM 22 N2 G A 41 -14.214 -4.851 8.286 1.00 34.81 N
ATOM 23 N3 G A 41 -13.420 -3.381 9.914 1.00 33.61 N
ATOM 24 C4 G A 41 -12.705 -2.212 10.019 1.00 32.72 C
ATOM 25 P A A 42 -8.304 -3.232 13.978 1.00 39.43 P
ATOM 26 OP1 A A 42 -7.171 -2.296 13.848 1.00 42.57 O
ATOM 27 OP2 A A 42 -8.790 -4.063 12.836 1.00 40.13 O
ATOM 28 O5' A A 42 -8.162 -4.385 15.003 1.00 43.12 O
TER
ATOM 1 O3' U B 38 -17.079 -0.838 13.355 1.00 45.56 O
ATOM 2 P U B 39 -17.418 0.733 13.520 1.00 35.53 P
ATOM 3 OP1 U B 39 -16.934 1.013 14.889 1.00 30.76 O
ATOM 4 OP2 U B 39 -18.840 0.750 13.085 1.00 43.15 O
ATOM 5 O5' U B 39 -16.558 1.494 12.417 1.00 33.66 O
ATOM 6 C5' U B 39 -15.143 1.644 12.656 1.00 38.72 C
ATOM 7 C4' U B 39 -14.537 1.764 11.254 1.00 40.77 C
ATOM 8 O4' U B 39 -14.692 0.425 10.731 1.00 39.59 O
ATOM 9 C3' U B 39 -15.337 2.608 10.273 1.00 45.94 C
ATOM 10 O3' U B 39 -14.563 3.554 9.450 1.00 45.97 O
ATOM 11 C2' U B 39 -16.058 1.585 9.392 1.00 39.10 C
ATOM 12 O2' U B 39 -16.204 2.122 8.095 1.00 42.21 O
ATOM 13 C1' U B 39 -15.067 0.452 9.363 1.00 36.80 C
ATOM 14 N1 U B 39 -15.800 -0.795 9.006 1.00 34.66 N
ATOM 15 C2 U B 39 -15.855 -1.190 7.696 1.00 36.27 C
ATOM 16 O2 U B 39 -15.271 -0.590 6.809 1.00 39.22 O
ATOM 17 N3 U B 39 -16.591 -2.323 7.458 1.00 26.64 N
ATOM 18 C4 U B 39 -17.295 -3.014 8.410 1.00 33.97 C
ATOM 19 O4 U B 39 -17.907 -4.012 8.050 1.00 41.01 O
ATOM 20 C5 U B 39 -17.218 -2.565 9.762 1.00 34.72 C
ATOM 21 C6 U B 39 -16.473 -1.482 9.998 1.00 36.34 C
ATOM 22 P U B 40 -14.233 4.978 10.099 1.00 57.91 P
ATOM 23 OP1 U B 40 -15.501 5.609 10.526 1.00 57.01 O
ATOM 24 OP2 U B 40 -13.390 5.624 9.094 1.00 61.41 O
ATOM 25 O5' U B 40 -13.358 4.750 11.430 1.00 48.08 O
TER
Atoms:
OP1: (-8.274,2.182,14.115)
OP2: (-9.551,2.540,11.907)
C3': (-10.568,-2.044,13.663)
C1': (-12.679,-2.003,12.553)
C5': (-10.809,0.275,14.705)
O6: (-11.822,-1.246,6.672)
O4': (-12.586,-0.912,13.467)
C8: (-11.635,-0.456,10.853)
C2: (-13.547,-3.731,8.620)
C6: (-12.283,-1.837,7.690)
C5: (-12.142,-1.455,9.035)
C4: (-12.705,-2.212,10.019)
P: (-9.525,2.240,13.363)
C4': (-11.476,-1.061,14.405)
C2': (-11.595,-2.995,13.018)
O2': (-12.237,-3.765,13.997)
N1: (-13.028,-3.010,7.574)
N2: (-14.214,-4.851,8.286)
N3: (-13.420,-3.381,9.914)
N7: (-11.493,-0.355,9.564)
N9: (-12.373,-1.559,11.204)
O5': (-10.522,0.970,13.484)
O3': (-9.579,-2.539,14.639)
OP2: (-9.551,2.540,11.907)
C3': (-10.568,-2.044,13.663)
C1': (-12.679,-2.003,12.553)
C5': (-10.809,0.275,14.705)
O6: (-11.822,-1.246,6.672)
O4': (-12.586,-0.912,13.467)
C8: (-11.635,-0.456,10.853)
C2: (-13.547,-3.731,8.620)
C6: (-12.283,-1.837,7.690)
C5: (-12.142,-1.455,9.035)
C4: (-12.705,-2.212,10.019)
P: (-9.525,2.240,13.363)
C4': (-11.476,-1.061,14.405)
C2': (-11.595,-2.995,13.018)
O2': (-12.237,-3.765,13.997)
N1: (-13.028,-3.010,7.574)
N2: (-14.214,-4.851,8.286)
N3: (-13.420,-3.381,9.914)
N7: (-11.493,-0.355,9.564)
N9: (-12.373,-1.559,11.204)
O5': (-10.522,0.970,13.484)
O3': (-9.579,-2.539,14.639)
C4: (-17.295,-3.014,8.410)
N3: (-16.591,-2.323,7.458)
OP1: (-16.934,1.013,14.889)
OP2: (-18.840,0.750,13.085)
C2: (-15.855,-1.190,7.696)
C1': (-15.067,0.452,9.363)
C3': (-15.337,2.608,10.273)
O5': (-16.558,1.494,12.417)
O4': (-14.692,0.425,10.731)
C5': (-15.143,1.644,12.656)
P: (-17.418,0.733,13.520)
C4': (-14.537,1.764,11.254)
C2': (-16.058,1.585,9.392)
O2': (-16.204,2.122,8.095)
N1: (-15.800,-0.795,9.006)
O4: (-17.907,-4.012,8.050)
O2: (-15.271,-0.590,6.809)
C6: (-16.473,-1.482,9.998)
C5: (-17.218,-2.565,9.762)
O3': (-14.563,3.554,9.450)
N3: (-16.591,-2.323,7.458)
OP1: (-16.934,1.013,14.889)
OP2: (-18.840,0.750,13.085)
C2: (-15.855,-1.190,7.696)
C1': (-15.067,0.452,9.363)
C3': (-15.337,2.608,10.273)
O5': (-16.558,1.494,12.417)
O4': (-14.692,0.425,10.731)
C5': (-15.143,1.644,12.656)
P: (-17.418,0.733,13.520)
C4': (-14.537,1.764,11.254)
C2': (-16.058,1.585,9.392)
O2': (-16.204,2.122,8.095)
N1: (-15.800,-0.795,9.006)
O4: (-17.907,-4.012,8.050)
O2: (-15.271,-0.590,6.809)
C6: (-16.473,-1.482,9.998)
C5: (-17.218,-2.565,9.762)
O3': (-14.563,3.554,9.450)
Image (generated by PyMOL):