ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0408:0407

Extra

PDB:
ATOM 1 O3' A A 407 88.563 83.599 30.653 1.00 53.12 O
ATOM 2 P U A 408 88.424 83.546 29.053 1.00 53.72 P
ATOM 3 OP1 U A 408 89.203 84.680 28.508 1.00 55.96 O
ATOM 4 OP2 U A 408 86.989 83.408 28.697 1.00 52.86 O
ATOM 5 O5' U A 408 89.167 82.195 28.667 1.00 54.91 O
ATOM 6 C5' U A 408 90.570 82.022 28.925 1.00 55.15 C
ATOM 7 C4' U A 408 91.003 80.632 28.522 1.00 56.33 C
ATOM 8 O4' U A 408 90.421 79.658 29.427 1.00 55.96 O
ATOM 9 C3' U A 408 90.545 80.183 27.142 1.00 56.29 C
ATOM 10 O3' U A 408 91.395 80.687 26.115 1.00 56.89 O
ATOM 11 C2' U A 408 90.585 78.666 27.273 1.00 55.74 C
ATOM 12 O2' U A 408 91.899 78.157 27.183 1.00 54.94 O
ATOM 13 C1' U A 408 90.086 78.479 28.710 1.00 56.02 C
ATOM 14 N1 U A 408 88.631 78.273 28.812 1.00 55.17 N
ATOM 15 C2 U A 408 88.155 76.971 28.797 1.00 55.22 C
ATOM 16 O2 U A 408 88.878 75.997 28.690 1.00 57.40 O
ATOM 17 N3 U A 408 86.794 76.851 28.914 1.00 54.57 N
ATOM 18 C4 U A 408 85.876 77.869 29.043 1.00 55.17 C
ATOM 19 O4 U A 408 84.676 77.595 29.152 1.00 54.55 O
ATOM 20 C5 U A 408 86.440 79.185 29.035 1.00 54.16 C
ATOM 21 C6 U A 408 87.763 79.339 28.925 1.00 54.72 C
ATOM 22 P C A 409 90.780 81.043 24.668 1.00 59.42 P
ATOM 23 OP1 C A 409 91.820 81.819 23.943 1.00 59.10 O
ATOM 24 OP2 C A 409 89.413 81.615 24.824 1.00 58.54 O
ATOM 25 O5' C A 409 90.622 79.622 23.970 1.00 59.84 O
TER

ATOM 1 O3' C B 406 83.225 84.733 33.454 1.00 49.86 O
ATOM 2 P A B 407 83.869 84.521 31.999 1.00 50.60 P
ATOM 3 OP1 A B 407 84.266 85.858 31.488 1.00 52.13 O
ATOM 4 OP2 A B 407 82.932 83.682 31.208 1.00 50.49 O
ATOM 5 O5' A B 407 85.185 83.673 32.279 1.00 48.83 O
ATOM 6 C5' A B 407 86.344 84.283 32.866 1.00 49.37 C
ATOM 7 C4' A B 407 87.508 83.328 32.823 1.00 49.87 C
ATOM 8 O4' A B 407 87.225 82.181 33.669 1.00 50.34 O
ATOM 9 C3' A B 407 87.785 82.724 31.458 1.00 50.68 C
ATOM 10 O3' A B 407 88.563 83.599 30.653 1.00 53.12 O
ATOM 11 C2' A B 407 88.514 81.439 31.817 1.00 49.90 C
ATOM 12 O2' A B 407 89.860 81.679 32.161 1.00 51.01 O
ATOM 13 C1' A B 407 87.749 81.006 33.072 1.00 49.27 C
ATOM 14 N9 A B 407 86.632 80.100 32.792 1.00 48.03 N
ATOM 15 C8 A B 407 85.312 80.421 32.571 1.00 45.77 C
ATOM 16 N7 A B 407 84.546 79.381 32.350 1.00 44.27 N
ATOM 17 C5 A B 407 85.415 78.303 32.431 1.00 44.77 C
ATOM 18 C6 A B 407 85.219 76.919 32.292 1.00 44.41 C
ATOM 19 N6 A B 407 84.038 76.357 32.038 1.00 40.61 N
ATOM 20 N1 A B 407 86.296 76.120 32.423 1.00 45.86 N
ATOM 21 C2 A B 407 87.487 76.681 32.674 1.00 45.78 C
ATOM 22 N3 A B 407 87.797 77.961 32.829 1.00 45.22 N
ATOM 23 C4 A B 407 86.704 78.730 32.696 1.00 46.17 C
ATOM 24 P U B 408 88.424 83.546 29.053 1.00 53.72 P
ATOM 25 OP1 U B 408 89.203 84.680 28.508 1.00 55.96 O
ATOM 26 OP2 U B 408 86.989 83.408 28.697 1.00 52.86 O
ATOM 27 O5' U B 408 89.167 82.195 28.667 1.00 54.91 O
TER

Atoms:
C4: (85.876,77.869,29.043)
N3: (86.794,76.851,28.914)
OP1: (89.203,84.680,28.508)
OP2: (86.989,83.408,28.697)
C2: (88.155,76.971,28.797)
C1': (90.086,78.479,28.710)
C3': (90.545,80.183,27.142)
O5': (89.167,82.195,28.667)
O4': (90.421,79.658,29.427)
C5': (90.570,82.022,28.925)
P: (88.424,83.546,29.053)
C4': (91.003,80.632,28.522)
C2': (90.585,78.666,27.273)
O2': (91.899,78.157,27.183)
N1: (88.631,78.273,28.812)
O4: (84.676,77.595,29.152)
O2: (88.878,75.997,28.690)
C6: (87.763,79.339,28.925)
C5: (86.440,79.185,29.035)
O3': (91.395,80.687,26.115)
OP1: (84.266,85.858,31.488)
OP2: (82.932,83.682,31.208)
C3': (87.785,82.724,31.458)
C1': (87.749,81.006,33.072)
C5': (86.344,84.283,32.866)
O4': (87.225,82.181,33.669)
C8: (85.312,80.421,32.571)
O2': (89.860,81.679,32.161)
C6: (85.219,76.919,32.292)
C5: (85.415,78.303,32.431)
C4: (86.704,78.730,32.696)
P: (83.869,84.521,31.999)
C4': (87.508,83.328,32.823)
C2': (88.514,81.439,31.817)
C2: (87.487,76.681,32.674)
N1: (86.296,76.120,32.423)
N3: (87.797,77.961,32.829)
N6: (84.038,76.357,32.038)
N7: (84.546,79.381,32.350)
N9: (86.632,80.100,32.792)
O5': (85.185,83.673,32.279)
O3': (88.563,83.599,30.653)
Image (generated by PyMOL):
PyMOL image
show in jmol