Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ0:A42:A93
Extra
PDB:
ATOM 1 O3' A A 41 -1.096 52.056 6.602 1.00 33.97 O
ATOM 2 P G A 42 0.385 52.005 6.014 1.00 34.34 P
ATOM 3 OP1 G A 42 1.004 53.334 6.224 1.00 35.27 O
ATOM 4 OP2 G A 42 0.296 51.432 4.649 1.00 34.74 O
ATOM 5 O5' G A 42 1.109 50.946 6.957 1.00 34.82 O
ATOM 6 C5' G A 42 1.328 51.206 8.343 1.00 36.13 C
ATOM 7 C4' G A 42 1.498 49.889 9.081 1.00 36.74 C
ATOM 8 O4' G A 42 0.342 49.052 8.808 1.00 37.11 O
ATOM 9 C3' G A 42 2.719 49.066 8.679 1.00 37.33 C
ATOM 10 O3' G A 42 3.238 48.357 9.796 1.00 38.27 O
ATOM 11 C2' G A 42 2.156 48.110 7.632 1.00 37.17 C
ATOM 12 O2' G A 42 2.833 46.871 7.563 1.00 37.77 O
ATOM 13 C1' G A 42 0.729 47.883 8.116 1.00 36.89 C
ATOM 14 N9 G A 42 -0.138 47.654 6.970 1.00 36.67 N
ATOM 15 C8 G A 42 -0.904 48.568 6.295 1.00 36.49 C
ATOM 16 N7 G A 42 -1.551 48.057 5.284 1.00 36.81 N
ATOM 17 C5 G A 42 -1.181 46.719 5.286 1.00 36.68 C
ATOM 18 C6 G A 42 -1.562 45.661 4.423 1.00 36.55 C
ATOM 19 O6 G A 42 -2.331 45.708 3.453 1.00 36.63 O
ATOM 20 N1 G A 42 -0.955 44.456 4.779 1.00 36.19 N
ATOM 21 C2 G A 42 -0.087 44.296 5.839 1.00 36.09 C
ATOM 22 N2 G A 42 0.408 43.067 6.039 1.00 35.85 N
ATOM 23 N3 G A 42 0.276 45.279 6.648 1.00 36.30 N
ATOM 24 C4 G A 42 -0.309 46.457 6.317 1.00 36.60 C
ATOM 25 P G A 43 4.813 48.161 9.982 1.00 39.28 P
ATOM 26 OP1 G A 43 4.987 47.028 10.917 1.00 39.09 O
ATOM 27 OP2 G A 43 5.401 49.489 10.274 1.00 39.86 O
ATOM 28 O5' G A 43 5.340 47.705 8.540 1.00 40.25 O
TER
ATOM 1 O3' U B 92 0.680 43.836 13.704 1.00 30.99 O
ATOM 2 P U B 93 -0.819 44.411 13.697 1.00 31.33 P
ATOM 3 OP1 U B 93 -0.924 45.355 14.835 1.00 31.51 O
ATOM 4 OP2 U B 93 -1.818 43.328 13.572 1.00 30.54 O
ATOM 5 O5' U B 93 -0.806 45.175 12.289 1.00 31.58 O
ATOM 6 C5' U B 93 -0.352 46.519 12.161 1.00 31.11 C
ATOM 7 C4' U B 93 -1.365 47.343 11.384 1.00 30.83 C
ATOM 8 O4' U B 93 -1.495 46.831 10.029 1.00 31.11 O
ATOM 9 C3' U B 93 -2.767 47.360 11.985 1.00 30.46 C
ATOM 10 O3' U B 93 -3.245 48.699 12.021 1.00 29.84 O
ATOM 11 C2' U B 93 -3.582 46.469 11.048 1.00 30.37 C
ATOM 12 O2' U B 93 -4.940 46.844 10.937 1.00 29.54 O
ATOM 13 C1' U B 93 -2.857 46.638 9.712 1.00 31.22 C
ATOM 14 N1 U B 93 -3.025 45.430 8.840 1.00 31.35 N
ATOM 15 C2 U B 93 -3.754 45.517 7.664 1.00 31.30 C
ATOM 16 O2 U B 93 -4.272 46.540 7.259 1.00 30.46 O
ATOM 17 N3 U B 93 -3.858 44.339 6.957 1.00 31.91 N
ATOM 18 C4 U B 93 -3.322 43.105 7.309 1.00 32.24 C
ATOM 19 O4 U B 93 -3.492 42.128 6.582 1.00 32.29 O
ATOM 20 C5 U B 93 -2.584 43.092 8.547 1.00 31.85 C
ATOM 21 C6 U B 93 -2.469 44.227 9.247 1.00 31.76 C
ATOM 22 P C B 94 -4.006 49.272 13.310 1.00 29.94 P
ATOM 23 OP1 C B 94 -3.806 50.740 13.333 1.00 29.29 O
ATOM 24 OP2 C B 94 -3.657 48.461 14.505 1.00 29.22 O
ATOM 25 O5' C B 94 -5.523 48.980 12.906 1.00 29.79 O
TER
ATOM 2 P G A 42 0.385 52.005 6.014 1.00 34.34 P
ATOM 3 OP1 G A 42 1.004 53.334 6.224 1.00 35.27 O
ATOM 4 OP2 G A 42 0.296 51.432 4.649 1.00 34.74 O
ATOM 5 O5' G A 42 1.109 50.946 6.957 1.00 34.82 O
ATOM 6 C5' G A 42 1.328 51.206 8.343 1.00 36.13 C
ATOM 7 C4' G A 42 1.498 49.889 9.081 1.00 36.74 C
ATOM 8 O4' G A 42 0.342 49.052 8.808 1.00 37.11 O
ATOM 9 C3' G A 42 2.719 49.066 8.679 1.00 37.33 C
ATOM 10 O3' G A 42 3.238 48.357 9.796 1.00 38.27 O
ATOM 11 C2' G A 42 2.156 48.110 7.632 1.00 37.17 C
ATOM 12 O2' G A 42 2.833 46.871 7.563 1.00 37.77 O
ATOM 13 C1' G A 42 0.729 47.883 8.116 1.00 36.89 C
ATOM 14 N9 G A 42 -0.138 47.654 6.970 1.00 36.67 N
ATOM 15 C8 G A 42 -0.904 48.568 6.295 1.00 36.49 C
ATOM 16 N7 G A 42 -1.551 48.057 5.284 1.00 36.81 N
ATOM 17 C5 G A 42 -1.181 46.719 5.286 1.00 36.68 C
ATOM 18 C6 G A 42 -1.562 45.661 4.423 1.00 36.55 C
ATOM 19 O6 G A 42 -2.331 45.708 3.453 1.00 36.63 O
ATOM 20 N1 G A 42 -0.955 44.456 4.779 1.00 36.19 N
ATOM 21 C2 G A 42 -0.087 44.296 5.839 1.00 36.09 C
ATOM 22 N2 G A 42 0.408 43.067 6.039 1.00 35.85 N
ATOM 23 N3 G A 42 0.276 45.279 6.648 1.00 36.30 N
ATOM 24 C4 G A 42 -0.309 46.457 6.317 1.00 36.60 C
ATOM 25 P G A 43 4.813 48.161 9.982 1.00 39.28 P
ATOM 26 OP1 G A 43 4.987 47.028 10.917 1.00 39.09 O
ATOM 27 OP2 G A 43 5.401 49.489 10.274 1.00 39.86 O
ATOM 28 O5' G A 43 5.340 47.705 8.540 1.00 40.25 O
TER
ATOM 1 O3' U B 92 0.680 43.836 13.704 1.00 30.99 O
ATOM 2 P U B 93 -0.819 44.411 13.697 1.00 31.33 P
ATOM 3 OP1 U B 93 -0.924 45.355 14.835 1.00 31.51 O
ATOM 4 OP2 U B 93 -1.818 43.328 13.572 1.00 30.54 O
ATOM 5 O5' U B 93 -0.806 45.175 12.289 1.00 31.58 O
ATOM 6 C5' U B 93 -0.352 46.519 12.161 1.00 31.11 C
ATOM 7 C4' U B 93 -1.365 47.343 11.384 1.00 30.83 C
ATOM 8 O4' U B 93 -1.495 46.831 10.029 1.00 31.11 O
ATOM 9 C3' U B 93 -2.767 47.360 11.985 1.00 30.46 C
ATOM 10 O3' U B 93 -3.245 48.699 12.021 1.00 29.84 O
ATOM 11 C2' U B 93 -3.582 46.469 11.048 1.00 30.37 C
ATOM 12 O2' U B 93 -4.940 46.844 10.937 1.00 29.54 O
ATOM 13 C1' U B 93 -2.857 46.638 9.712 1.00 31.22 C
ATOM 14 N1 U B 93 -3.025 45.430 8.840 1.00 31.35 N
ATOM 15 C2 U B 93 -3.754 45.517 7.664 1.00 31.30 C
ATOM 16 O2 U B 93 -4.272 46.540 7.259 1.00 30.46 O
ATOM 17 N3 U B 93 -3.858 44.339 6.957 1.00 31.91 N
ATOM 18 C4 U B 93 -3.322 43.105 7.309 1.00 32.24 C
ATOM 19 O4 U B 93 -3.492 42.128 6.582 1.00 32.29 O
ATOM 20 C5 U B 93 -2.584 43.092 8.547 1.00 31.85 C
ATOM 21 C6 U B 93 -2.469 44.227 9.247 1.00 31.76 C
ATOM 22 P C B 94 -4.006 49.272 13.310 1.00 29.94 P
ATOM 23 OP1 C B 94 -3.806 50.740 13.333 1.00 29.29 O
ATOM 24 OP2 C B 94 -3.657 48.461 14.505 1.00 29.22 O
ATOM 25 O5' C B 94 -5.523 48.980 12.906 1.00 29.79 O
TER
Atoms:
OP1: (1.004,53.334,6.224)
OP2: (0.296,51.432,4.649)
C3': (2.719,49.066,8.679)
C1': (0.729,47.883,8.116)
C5': (1.328,51.206,8.343)
O6: (-2.331,45.708,3.453)
O4': (0.342,49.052,8.808)
C8: (-0.904,48.568,6.295)
C2: (-0.087,44.296,5.839)
C6: (-1.562,45.661,4.423)
C5: (-1.181,46.719,5.286)
C4: (-0.309,46.457,6.317)
P: (0.385,52.005,6.014)
C4': (1.498,49.889,9.081)
C2': (2.156,48.110,7.632)
O2': (2.833,46.871,7.563)
N1: (-0.955,44.456,4.779)
N2: (0.408,43.067,6.039)
N3: (0.276,45.279,6.648)
N7: (-1.551,48.057,5.284)
N9: (-0.138,47.654,6.970)
O5': (1.109,50.946,6.957)
O3': (3.238,48.357,9.796)
OP2: (0.296,51.432,4.649)
C3': (2.719,49.066,8.679)
C1': (0.729,47.883,8.116)
C5': (1.328,51.206,8.343)
O6: (-2.331,45.708,3.453)
O4': (0.342,49.052,8.808)
C8: (-0.904,48.568,6.295)
C2: (-0.087,44.296,5.839)
C6: (-1.562,45.661,4.423)
C5: (-1.181,46.719,5.286)
C4: (-0.309,46.457,6.317)
P: (0.385,52.005,6.014)
C4': (1.498,49.889,9.081)
C2': (2.156,48.110,7.632)
O2': (2.833,46.871,7.563)
N1: (-0.955,44.456,4.779)
N2: (0.408,43.067,6.039)
N3: (0.276,45.279,6.648)
N7: (-1.551,48.057,5.284)
N9: (-0.138,47.654,6.970)
O5': (1.109,50.946,6.957)
O3': (3.238,48.357,9.796)
C4: (-3.322,43.105,7.309)
N3: (-3.858,44.339,6.957)
OP1: (-0.924,45.355,14.835)
OP2: (-1.818,43.328,13.572)
C2: (-3.754,45.517,7.664)
C1': (-2.857,46.638,9.712)
C3': (-2.767,47.360,11.985)
O5': (-0.806,45.175,12.289)
O4': (-1.495,46.831,10.029)
C5': (-0.352,46.519,12.161)
P: (-0.819,44.411,13.697)
C4': (-1.365,47.343,11.384)
C2': (-3.582,46.469,11.048)
O2': (-4.940,46.844,10.937)
N1: (-3.025,45.430,8.840)
O4: (-3.492,42.128,6.582)
O2: (-4.272,46.540,7.259)
C6: (-2.469,44.227,9.247)
C5: (-2.584,43.092,8.547)
O3': (-3.245,48.699,12.021)
N3: (-3.858,44.339,6.957)
OP1: (-0.924,45.355,14.835)
OP2: (-1.818,43.328,13.572)
C2: (-3.754,45.517,7.664)
C1': (-2.857,46.638,9.712)
C3': (-2.767,47.360,11.985)
O5': (-0.806,45.175,12.289)
O4': (-1.495,46.831,10.029)
C5': (-0.352,46.519,12.161)
P: (-0.819,44.411,13.697)
C4': (-1.365,47.343,11.384)
C2': (-3.582,46.469,11.048)
O2': (-4.940,46.844,10.937)
N1: (-3.025,45.430,8.840)
O4: (-3.492,42.128,6.582)
O2: (-4.272,46.540,7.259)
C6: (-2.469,44.227,9.247)
C5: (-2.584,43.092,8.547)
O3': (-3.245,48.699,12.021)
Image (generated by PyMOL):