Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A347:A49
Extra
PDB:
ATOM 1 O3' A A 346 -22.394 37.125 113.351 1.00 12.00 O
ATOM 2 P G A 347 -23.447 38.290 113.677 1.00 28.59 P
ATOM 3 OP1 G A 347 -24.766 37.867 113.155 1.00 63.66 O
ATOM 4 OP2 G A 347 -22.846 39.547 113.190 1.00 62.33 O
ATOM 5 O5' G A 347 -23.523 38.336 115.276 1.00 15.06 O
ATOM 6 C5' G A 347 -24.434 37.477 116.020 1.00 15.06 C
ATOM 7 C4' G A 347 -24.411 37.818 117.501 1.00 15.25 C
ATOM 8 O4' G A 347 -23.053 37.688 117.994 1.00 15.42 O
ATOM 9 C3' G A 347 -24.838 39.228 117.893 1.00 16.12 C
ATOM 10 O3' G A 347 -26.249 39.306 118.085 1.00 17.19 O
ATOM 11 C2' G A 347 -24.108 39.438 119.212 1.00 16.72 C
ATOM 12 O2' G A 347 -24.802 38.822 120.284 1.00 16.15 O
ATOM 13 C1' G A 347 -22.796 38.688 118.969 1.00 16.29 C
ATOM 14 N9 G A 347 -21.722 39.545 118.467 1.00 42.45 N
ATOM 15 C8 G A 347 -21.189 39.523 117.206 1.00 42.02 C
ATOM 16 N7 G A 347 -20.259 40.417 117.026 1.00 43.45 N
ATOM 17 C5 G A 347 -20.170 41.069 118.241 1.00 43.89 C
ATOM 18 C6 G A 347 -19.350 42.133 118.631 1.00 43.73 C
ATOM 19 O6 G A 347 -18.519 42.744 117.959 1.00 44.99 O
ATOM 20 N1 G A 347 -19.570 42.487 119.951 1.00 43.06 N
ATOM 21 C2 G A 347 -20.476 41.895 120.782 1.00 42.70 C
ATOM 22 N2 G A 347 -20.551 42.392 122.016 1.00 41.75 N
ATOM 23 N3 G A 347 -21.258 40.897 120.427 1.00 43.75 N
ATOM 24 C4 G A 347 -21.055 40.536 119.149 1.00 43.35 C
ATOM 25 P U A 348 -26.983 40.741 118.062 1.00 32.71 P
ATOM 26 OP1 U A 348 -28.446 40.495 118.129 1.00 71.10 O
ATOM 27 OP2 U A 348 -26.418 41.511 116.919 1.00 72.98 O
ATOM 28 O5' U A 348 -26.527 41.463 119.414 1.00 21.41 O
TER
ATOM 1 O3' A B 48 -15.567 51.091 126.737 1.00 7.37 O
ATOM 2 P C B 49 -14.814 49.691 127.017 1.00 33.89 P
ATOM 3 OP1 C B 49 -14.430 49.663 128.454 1.00 31.87 O
ATOM 4 OP2 C B 49 -13.770 49.507 125.962 1.00 29.99 O
ATOM 5 O5' C B 49 -15.960 48.604 126.843 1.00 50.22 O
ATOM 6 C5' C B 49 -15.646 47.207 126.717 1.00 50.55 C
ATOM 7 C4' C B 49 -16.917 46.397 126.710 1.00 52.18 C
ATOM 8 O4' C B 49 -17.795 46.904 125.678 1.00 52.62 O
ATOM 9 C3' C B 49 -16.767 44.914 126.419 1.00 53.67 C
ATOM 10 O3' C B 49 -16.495 44.217 127.637 1.00 55.04 O
ATOM 11 C2' C B 49 -18.127 44.551 125.826 1.00 54.49 C
ATOM 12 O2' C B 49 -19.102 44.311 126.818 1.00 55.71 O
ATOM 13 C1' C B 49 -18.510 45.837 125.089 1.00 53.89 C
ATOM 14 N1 C B 49 -18.217 45.822 123.641 1.00 34.35 N
ATOM 15 C2 C B 49 -19.154 45.260 122.761 1.00 33.96 C
ATOM 16 O2 C B 49 -20.232 44.837 123.213 1.00 34.96 O
ATOM 17 N3 C B 49 -18.865 45.199 121.445 1.00 34.05 N
ATOM 18 C4 C B 49 -17.709 45.683 120.993 1.00 33.96 C
ATOM 19 N4 C B 49 -17.447 45.567 119.688 1.00 33.20 N
ATOM 20 C5 C B 49 -16.760 46.296 121.858 1.00 33.86 C
ATOM 21 C6 C B 49 -17.048 46.340 123.160 1.00 34.38 C
ATOM 22 P A B 50 -16.289 42.618 127.631 1.00 39.49 P
ATOM 23 OP1 A B 50 -15.511 42.286 128.845 1.00 70.71 O
ATOM 24 OP2 A B 50 -15.775 42.205 126.307 1.00 70.70 O
ATOM 25 O5' A B 50 -17.757 42.033 127.814 1.00 21.79 O
TER
ATOM 2 P G A 347 -23.447 38.290 113.677 1.00 28.59 P
ATOM 3 OP1 G A 347 -24.766 37.867 113.155 1.00 63.66 O
ATOM 4 OP2 G A 347 -22.846 39.547 113.190 1.00 62.33 O
ATOM 5 O5' G A 347 -23.523 38.336 115.276 1.00 15.06 O
ATOM 6 C5' G A 347 -24.434 37.477 116.020 1.00 15.06 C
ATOM 7 C4' G A 347 -24.411 37.818 117.501 1.00 15.25 C
ATOM 8 O4' G A 347 -23.053 37.688 117.994 1.00 15.42 O
ATOM 9 C3' G A 347 -24.838 39.228 117.893 1.00 16.12 C
ATOM 10 O3' G A 347 -26.249 39.306 118.085 1.00 17.19 O
ATOM 11 C2' G A 347 -24.108 39.438 119.212 1.00 16.72 C
ATOM 12 O2' G A 347 -24.802 38.822 120.284 1.00 16.15 O
ATOM 13 C1' G A 347 -22.796 38.688 118.969 1.00 16.29 C
ATOM 14 N9 G A 347 -21.722 39.545 118.467 1.00 42.45 N
ATOM 15 C8 G A 347 -21.189 39.523 117.206 1.00 42.02 C
ATOM 16 N7 G A 347 -20.259 40.417 117.026 1.00 43.45 N
ATOM 17 C5 G A 347 -20.170 41.069 118.241 1.00 43.89 C
ATOM 18 C6 G A 347 -19.350 42.133 118.631 1.00 43.73 C
ATOM 19 O6 G A 347 -18.519 42.744 117.959 1.00 44.99 O
ATOM 20 N1 G A 347 -19.570 42.487 119.951 1.00 43.06 N
ATOM 21 C2 G A 347 -20.476 41.895 120.782 1.00 42.70 C
ATOM 22 N2 G A 347 -20.551 42.392 122.016 1.00 41.75 N
ATOM 23 N3 G A 347 -21.258 40.897 120.427 1.00 43.75 N
ATOM 24 C4 G A 347 -21.055 40.536 119.149 1.00 43.35 C
ATOM 25 P U A 348 -26.983 40.741 118.062 1.00 32.71 P
ATOM 26 OP1 U A 348 -28.446 40.495 118.129 1.00 71.10 O
ATOM 27 OP2 U A 348 -26.418 41.511 116.919 1.00 72.98 O
ATOM 28 O5' U A 348 -26.527 41.463 119.414 1.00 21.41 O
TER
ATOM 1 O3' A B 48 -15.567 51.091 126.737 1.00 7.37 O
ATOM 2 P C B 49 -14.814 49.691 127.017 1.00 33.89 P
ATOM 3 OP1 C B 49 -14.430 49.663 128.454 1.00 31.87 O
ATOM 4 OP2 C B 49 -13.770 49.507 125.962 1.00 29.99 O
ATOM 5 O5' C B 49 -15.960 48.604 126.843 1.00 50.22 O
ATOM 6 C5' C B 49 -15.646 47.207 126.717 1.00 50.55 C
ATOM 7 C4' C B 49 -16.917 46.397 126.710 1.00 52.18 C
ATOM 8 O4' C B 49 -17.795 46.904 125.678 1.00 52.62 O
ATOM 9 C3' C B 49 -16.767 44.914 126.419 1.00 53.67 C
ATOM 10 O3' C B 49 -16.495 44.217 127.637 1.00 55.04 O
ATOM 11 C2' C B 49 -18.127 44.551 125.826 1.00 54.49 C
ATOM 12 O2' C B 49 -19.102 44.311 126.818 1.00 55.71 O
ATOM 13 C1' C B 49 -18.510 45.837 125.089 1.00 53.89 C
ATOM 14 N1 C B 49 -18.217 45.822 123.641 1.00 34.35 N
ATOM 15 C2 C B 49 -19.154 45.260 122.761 1.00 33.96 C
ATOM 16 O2 C B 49 -20.232 44.837 123.213 1.00 34.96 O
ATOM 17 N3 C B 49 -18.865 45.199 121.445 1.00 34.05 N
ATOM 18 C4 C B 49 -17.709 45.683 120.993 1.00 33.96 C
ATOM 19 N4 C B 49 -17.447 45.567 119.688 1.00 33.20 N
ATOM 20 C5 C B 49 -16.760 46.296 121.858 1.00 33.86 C
ATOM 21 C6 C B 49 -17.048 46.340 123.160 1.00 34.38 C
ATOM 22 P A B 50 -16.289 42.618 127.631 1.00 39.49 P
ATOM 23 OP1 A B 50 -15.511 42.286 128.845 1.00 70.71 O
ATOM 24 OP2 A B 50 -15.775 42.205 126.307 1.00 70.70 O
ATOM 25 O5' A B 50 -17.757 42.033 127.814 1.00 21.79 O
TER
Atoms:
OP1: (-24.766,37.867,113.155)
OP2: (-22.846,39.547,113.190)
C3': (-24.838,39.228,117.893)
C1': (-22.796,38.688,118.969)
C5': (-24.434,37.477,116.020)
O6: (-18.519,42.744,117.959)
O4': (-23.053,37.688,117.994)
C8: (-21.189,39.523,117.206)
C2: (-20.476,41.895,120.782)
C6: (-19.350,42.133,118.631)
C5: (-20.170,41.069,118.241)
C4: (-21.055,40.536,119.149)
P: (-23.447,38.290,113.677)
C4': (-24.411,37.818,117.501)
C2': (-24.108,39.438,119.212)
O2': (-24.802,38.822,120.284)
N1: (-19.570,42.487,119.951)
N2: (-20.551,42.392,122.016)
N3: (-21.258,40.897,120.427)
N7: (-20.259,40.417,117.026)
N9: (-21.722,39.545,118.467)
O5': (-23.523,38.336,115.276)
O3': (-26.249,39.306,118.085)
OP2: (-22.846,39.547,113.190)
C3': (-24.838,39.228,117.893)
C1': (-22.796,38.688,118.969)
C5': (-24.434,37.477,116.020)
O6: (-18.519,42.744,117.959)
O4': (-23.053,37.688,117.994)
C8: (-21.189,39.523,117.206)
C2: (-20.476,41.895,120.782)
C6: (-19.350,42.133,118.631)
C5: (-20.170,41.069,118.241)
C4: (-21.055,40.536,119.149)
P: (-23.447,38.290,113.677)
C4': (-24.411,37.818,117.501)
C2': (-24.108,39.438,119.212)
O2': (-24.802,38.822,120.284)
N1: (-19.570,42.487,119.951)
N2: (-20.551,42.392,122.016)
N3: (-21.258,40.897,120.427)
N7: (-20.259,40.417,117.026)
N9: (-21.722,39.545,118.467)
O5': (-23.523,38.336,115.276)
O3': (-26.249,39.306,118.085)
C2: (-19.154,45.260,122.761)
OP1: (-14.430,49.663,128.454)
OP2: (-13.770,49.507,125.962)
C4: (-17.709,45.683,120.993)
O5': (-15.960,48.604,126.843)
C3': (-16.767,44.914,126.419)
C1': (-18.510,45.837,125.089)
O4': (-17.795,46.904,125.678)
C5': (-15.646,47.207,126.717)
P: (-14.814,49.691,127.017)
O2: (-20.232,44.837,123.213)
C4': (-16.917,46.397,126.710)
C2': (-18.127,44.551,125.826)
O2': (-19.102,44.311,126.818)
N1: (-18.217,45.822,123.641)
N3: (-18.865,45.199,121.445)
N4: (-17.447,45.567,119.688)
C6: (-17.048,46.340,123.160)
C5: (-16.760,46.296,121.858)
O3': (-16.495,44.217,127.637)
OP1: (-14.430,49.663,128.454)
OP2: (-13.770,49.507,125.962)
C4: (-17.709,45.683,120.993)
O5': (-15.960,48.604,126.843)
C3': (-16.767,44.914,126.419)
C1': (-18.510,45.837,125.089)
O4': (-17.795,46.904,125.678)
C5': (-15.646,47.207,126.717)
P: (-14.814,49.691,127.017)
O2: (-20.232,44.837,123.213)
C4': (-16.917,46.397,126.710)
C2': (-18.127,44.551,125.826)
O2': (-19.102,44.311,126.818)
N1: (-18.217,45.822,123.641)
N3: (-18.865,45.199,121.445)
N4: (-17.447,45.567,119.688)
C6: (-17.048,46.340,123.160)
C5: (-16.760,46.296,121.858)
O3': (-16.495,44.217,127.637)
Image (generated by PyMOL):