ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A136:A164

Extra

PDB:
ATOM 1 O3' G A 135 89.183 30.829 -5.460 1.00 85.13 O
ATOM 2 P G A 136 90.293 30.051 -4.583 1.00 75.17 P
ATOM 3 OP1 G A 136 89.871 28.624 -4.582 1.00 69.23 O
ATOM 4 OP2 G A 136 90.499 30.758 -3.285 1.00 69.23 O
ATOM 5 O5' G A 136 91.641 30.165 -5.433 1.00 75.17 O
ATOM 6 C5' G A 136 91.792 29.435 -6.660 1.00 75.17 C
ATOM 7 C4' G A 136 93.002 29.913 -7.430 1.00 75.17 C
ATOM 8 O4' G A 136 92.921 31.346 -7.657 1.00 75.17 O
ATOM 9 C3' G A 136 94.364 29.737 -6.789 1.00 75.17 C
ATOM 10 O3' G A 136 94.886 28.434 -6.919 1.00 75.17 O
ATOM 11 C2' G A 136 95.212 30.740 -7.555 1.00 75.17 C
ATOM 12 O2' G A 136 95.617 30.275 -8.825 1.00 75.17 O
ATOM 13 C1' G A 136 94.231 31.892 -7.733 1.00 75.17 C
ATOM 14 N9 G A 136 94.425 32.841 -6.642 1.00 69.23 N
ATOM 15 C8 G A 136 93.575 33.105 -5.598 1.00 69.23 C
ATOM 16 N7 G A 136 94.071 33.949 -4.736 1.00 69.23 N
ATOM 17 C5 G A 136 95.320 34.274 -5.249 1.00 69.23 C
ATOM 18 C6 G A 136 96.327 35.136 -4.742 1.00 69.23 C
ATOM 19 O6 G A 136 96.319 35.794 -3.692 1.00 69.23 O
ATOM 20 N1 G A 136 97.430 35.191 -5.590 1.00 69.23 N
ATOM 21 C2 G A 136 97.550 34.505 -6.775 1.00 69.23 C
ATOM 22 N2 G A 136 98.680 34.705 -7.466 1.00 69.23 N
ATOM 23 N3 G A 136 96.626 33.688 -7.249 1.00 69.23 N
ATOM 24 C4 G A 136 95.544 33.620 -6.438 1.00 69.23 C
ATOM 25 P G A 137 96.005 27.935 -5.879 1.00 72.40 P
ATOM 26 OP1 G A 137 96.209 26.484 -6.119 1.00 65.70 O
ATOM 27 OP2 G A 137 95.605 28.408 -4.526 1.00 65.70 O
ATOM 28 O5' G A 137 97.339 28.699 -6.314 1.00 72.40 O
TER

ATOM 1 O3' C B 163 104.913 42.170 -3.743 1.00 46.88 O
ATOM 2 P C B 164 103.966 42.711 -4.935 1.00 61.96 P
ATOM 3 OP1 C B 164 104.739 43.755 -5.657 1.00 67.06 O
ATOM 4 OP2 C B 164 102.621 43.056 -4.397 1.00 67.06 O
ATOM 5 O5' C B 164 103.826 41.448 -5.901 1.00 61.96 O
ATOM 6 C5' C B 164 104.991 40.860 -6.523 1.00 61.96 C
ATOM 7 C4' C B 164 104.603 39.668 -7.374 1.00 61.96 C
ATOM 8 O4' C B 164 104.314 38.519 -6.532 1.00 61.96 O
ATOM 9 C3' C B 164 103.355 39.850 -8.222 1.00 61.96 C
ATOM 10 O3' C B 164 103.593 40.521 -9.452 1.00 61.96 O
ATOM 11 C2' C B 164 102.878 38.422 -8.429 1.00 61.96 C
ATOM 12 O2' C B 164 103.564 37.785 -9.483 1.00 61.96 O
ATOM 13 C1' C B 164 103.243 37.773 -7.093 1.00 61.96 C
ATOM 14 N1 C B 164 102.099 37.803 -6.158 1.00 67.06 N
ATOM 15 C2 C B 164 101.050 36.884 -6.334 1.00 67.06 C
ATOM 16 O2 C B 164 101.145 36.014 -7.212 1.00 67.06 O
ATOM 17 N3 C B 164 99.961 36.965 -5.538 1.00 67.06 N
ATOM 18 C4 C B 164 99.901 37.898 -4.587 1.00 67.06 C
ATOM 19 N4 C B 164 98.792 37.972 -3.861 1.00 67.06 N
ATOM 20 C5 C B 164 100.972 38.805 -4.351 1.00 67.06 C
ATOM 21 C6 C B 164 102.038 38.726 -5.151 1.00 67.06 C
ATOM 22 P C B 165 102.392 41.339 -10.140 1.00 56.51 P
ATOM 23 OP1 C B 165 102.932 42.035 -11.333 1.00 59.12 O
ATOM 24 OP2 C B 165 101.697 42.120 -9.084 1.00 59.12 O
ATOM 25 O5' C B 165 101.387 40.210 -10.644 1.00 56.51 O
TER

Atoms:
OP1: (89.871,28.624,-4.582)
OP2: (90.499,30.758,-3.285)
C3': (94.364,29.737,-6.789)
C1': (94.231,31.892,-7.733)
C5': (91.792,29.435,-6.660)
O6: (96.319,35.794,-3.692)
O4': (92.921,31.346,-7.657)
C8: (93.575,33.105,-5.598)
C2: (97.550,34.505,-6.775)
C6: (96.327,35.136,-4.742)
C5: (95.320,34.274,-5.249)
C4: (95.544,33.620,-6.438)
P: (90.293,30.051,-4.583)
C4': (93.002,29.913,-7.430)
C2': (95.212,30.740,-7.555)
O2': (95.617,30.275,-8.825)
N1: (97.430,35.191,-5.590)
N2: (98.680,34.705,-7.466)
N3: (96.626,33.688,-7.249)
N7: (94.071,33.949,-4.736)
N9: (94.425,32.841,-6.642)
O5': (91.641,30.165,-5.433)
O3': (94.886,28.434,-6.919)
C2: (101.050,36.884,-6.334)
OP1: (104.739,43.755,-5.657)
OP2: (102.621,43.056,-4.397)
C4: (99.901,37.898,-4.587)
O5': (103.826,41.448,-5.901)
C3': (103.355,39.850,-8.222)
C1': (103.243,37.773,-7.093)
O4': (104.314,38.519,-6.532)
C5': (104.991,40.860,-6.523)
P: (103.966,42.711,-4.935)
O2: (101.145,36.014,-7.212)
C4': (104.603,39.668,-7.374)
C2': (102.878,38.422,-8.429)
O2': (103.564,37.785,-9.483)
N1: (102.099,37.803,-6.158)
N3: (99.961,36.965,-5.538)
N4: (98.792,37.972,-3.861)
C6: (102.038,38.726,-5.151)
C5: (100.972,38.805,-4.351)
O3': (103.593,40.521,-9.452)
Image (generated by PyMOL):
PyMOL image
show in jmol