ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MJB:A5:A4

Extra

PDB:
ATOM 1 O3' A A 4 15.646 -11.198 -24.574 1.00 69.30 O
ATOM 2 P U A 5 14.943 -10.849 -23.173 1.00 68.49 P
ATOM 3 OP1 U A 5 13.516 -10.522 -23.417 1.00 69.74 O
ATOM 4 OP2 U A 5 15.828 -9.851 -22.521 1.00 69.43 O
ATOM 5 O5' U A 5 14.962 -12.223 -22.369 1.00 65.50 O
ATOM 6 C5' U A 5 14.291 -13.366 -22.886 1.00 62.21 C
ATOM 7 C4' U A 5 14.695 -14.593 -22.118 1.00 60.40 C
ATOM 8 O4' U A 5 16.124 -14.794 -22.260 1.00 59.41 O
ATOM 9 C3' U A 5 14.501 -14.470 -20.622 1.00 60.93 C
ATOM 10 O3' U A 5 13.180 -14.790 -20.251 1.00 62.46 O
ATOM 11 C2' U A 5 15.498 -15.478 -20.081 1.00 59.43 C
ATOM 12 O2' U A 5 15.038 -16.815 -20.165 1.00 60.07 O
ATOM 13 C1' U A 5 16.668 -15.253 -21.032 1.00 57.66 C
ATOM 14 N1 U A 5 17.601 -14.234 -20.531 1.00 55.04 N
ATOM 15 C2 U A 5 18.418 -14.589 -19.478 1.00 54.21 C
ATOM 16 O2 U A 5 18.365 -15.684 -18.945 1.00 52.72 O
ATOM 17 N3 U A 5 19.296 -13.613 -19.071 1.00 53.62 N
ATOM 18 C4 U A 5 19.432 -12.342 -19.596 1.00 54.43 C
ATOM 19 O4 U A 5 20.333 -11.611 -19.179 1.00 55.39 O
ATOM 20 C5 U A 5 18.531 -12.039 -20.672 1.00 54.48 C
ATOM 21 C6 U A 5 17.669 -12.974 -21.094 1.00 54.45 C
ATOM 22 P U A 6 12.533 -14.061 -18.986 1.00 64.14 P
ATOM 23 OP1 U A 6 11.079 -14.366 -18.989 1.00 64.89 O
ATOM 24 OP2 U A 6 13.003 -12.647 -19.037 1.00 62.90 O
ATOM 25 O5' U A 6 13.185 -14.801 -17.737 1.00 63.28 O
TER

ATOM 1 O3' U B 3 20.038 -7.202 -26.415 1.00 81.98 O
ATOM 2 P A B 4 18.948 -7.429 -25.242 1.00 82.04 P
ATOM 3 OP1 A B 4 17.711 -6.719 -25.640 1.00 83.49 O
ATOM 4 OP2 A B 4 19.560 -7.135 -23.921 1.00 81.93 O
ATOM 5 O5' A B 4 18.635 -8.989 -25.292 1.00 78.86 O
ATOM 6 C5' A B 4 17.820 -9.545 -26.319 1.00 74.62 C
ATOM 7 C4' A B 4 17.587 -11.008 -26.041 1.00 72.18 C
ATOM 8 O4' A B 4 18.864 -11.698 -26.098 1.00 70.14 O
ATOM 9 C3' A B 4 17.064 -11.294 -24.641 1.00 70.89 C
ATOM 10 O3' A B 4 15.646 -11.198 -24.574 1.00 69.30 O
ATOM 11 C2' A B 4 17.572 -12.706 -24.385 1.00 70.09 C
ATOM 12 O2' A B 4 16.798 -13.707 -25.019 1.00 70.87 O
ATOM 13 C1' A B 4 18.951 -12.635 -25.036 1.00 69.18 C
ATOM 14 N9 A B 4 20.014 -12.198 -24.127 1.00 66.76 N
ATOM 15 C8 A B 4 20.642 -10.976 -24.077 1.00 65.51 C
ATOM 16 N7 A B 4 21.601 -10.911 -23.184 1.00 65.01 N
ATOM 17 C5 A B 4 21.593 -12.169 -22.597 1.00 65.00 C
ATOM 18 C6 A B 4 22.385 -12.750 -21.586 1.00 65.48 C
ATOM 19 N6 A B 4 23.372 -12.107 -20.955 1.00 66.57 N
ATOM 20 N1 A B 4 22.126 -14.033 -21.242 1.00 64.36 N
ATOM 21 C2 A B 4 21.135 -14.674 -21.871 1.00 64.69 C
ATOM 22 N3 A B 4 20.322 -14.235 -22.833 1.00 64.44 N
ATOM 23 C4 A B 4 20.611 -12.964 -23.157 1.00 64.93 C
ATOM 24 P U B 5 14.943 -10.849 -23.173 1.00 68.49 P
ATOM 25 OP1 U B 5 13.516 -10.522 -23.417 1.00 69.74 O
ATOM 26 OP2 U B 5 15.828 -9.851 -22.521 1.00 69.43 O
ATOM 27 O5' U B 5 14.962 -12.223 -22.369 1.00 65.50 O
TER

Atoms:
C4: (19.432,-12.342,-19.596)
N3: (19.296,-13.613,-19.071)
OP1: (13.516,-10.522,-23.417)
OP2: (15.828,-9.851,-22.521)
C2: (18.418,-14.589,-19.478)
C1': (16.668,-15.253,-21.032)
C3': (14.501,-14.470,-20.622)
O5': (14.962,-12.223,-22.369)
O4': (16.124,-14.794,-22.260)
C5': (14.291,-13.366,-22.886)
P: (14.943,-10.849,-23.173)
C4': (14.695,-14.593,-22.118)
C2': (15.498,-15.478,-20.081)
O2': (15.038,-16.815,-20.165)
N1: (17.601,-14.234,-20.531)
O4: (20.333,-11.611,-19.179)
O2: (18.365,-15.684,-18.945)
C6: (17.669,-12.974,-21.094)
C5: (18.531,-12.039,-20.672)
O3': (13.180,-14.790,-20.251)
OP1: (17.711,-6.719,-25.640)
OP2: (19.560,-7.135,-23.921)
C3': (17.064,-11.294,-24.641)
C1': (18.951,-12.635,-25.036)
C5': (17.820,-9.545,-26.319)
O4': (18.864,-11.698,-26.098)
C8: (20.642,-10.976,-24.077)
O2': (16.798,-13.707,-25.019)
C6: (22.385,-12.750,-21.586)
C5: (21.593,-12.169,-22.597)
C4: (20.611,-12.964,-23.157)
P: (18.948,-7.429,-25.242)
C4': (17.587,-11.008,-26.041)
C2': (17.572,-12.706,-24.385)
C2: (21.135,-14.674,-21.871)
N1: (22.126,-14.033,-21.242)
N3: (20.322,-14.235,-22.833)
N6: (23.372,-12.107,-20.955)
N7: (21.601,-10.911,-23.184)
N9: (20.014,-12.198,-24.127)
O5': (18.635,-8.989,-25.292)
O3': (15.646,-11.198,-24.574)
Image (generated by PyMOL):
PyMOL image
show in jmol