ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0649:0673

Extra

PDB:
ATOM 1 O3' A A 648 36.673 76.983 34.171 1.00 38.15 O
ATOM 2 P G A 649 36.034 77.725 32.891 1.00 39.52 P
ATOM 3 OP1 G A 649 35.242 76.744 32.098 1.00 41.48 O
ATOM 4 OP2 G A 649 37.134 78.477 32.240 1.00 40.79 O
ATOM 5 O5' G A 649 35.009 78.761 33.527 1.00 37.15 O
ATOM 6 C5' G A 649 35.364 80.140 33.708 1.00 38.35 C
ATOM 7 C4' G A 649 35.494 80.472 35.179 1.00 38.11 C
ATOM 8 O4' G A 649 36.711 79.887 35.716 1.00 37.43 O
ATOM 9 C3' G A 649 35.657 81.957 35.427 1.00 37.29 C
ATOM 10 O3' G A 649 34.386 82.580 35.490 1.00 37.10 O
ATOM 11 C2' G A 649 36.404 81.995 36.745 1.00 37.50 C
ATOM 12 O2' G A 649 35.567 81.787 37.859 1.00 39.90 O
ATOM 13 C1' G A 649 37.351 80.810 36.574 1.00 37.83 C
ATOM 14 N9 G A 649 38.606 81.212 35.947 1.00 40.52 N
ATOM 15 C8 G A 649 39.053 80.883 34.689 1.00 41.20 C
ATOM 16 N7 G A 649 40.210 81.411 34.402 1.00 41.48 N
ATOM 17 C5 G A 649 40.550 82.131 35.538 1.00 41.35 C
ATOM 18 C6 G A 649 41.698 82.906 35.821 1.00 41.65 C
ATOM 19 O6 G A 649 42.676 83.132 35.094 1.00 40.75 O
ATOM 20 N1 G A 649 41.644 83.445 37.103 1.00 41.70 N
ATOM 21 C2 G A 649 40.620 83.257 38.000 1.00 41.27 C
ATOM 22 N2 G A 649 40.759 83.833 39.203 1.00 39.45 N
ATOM 23 N3 G A 649 39.542 82.547 37.742 1.00 41.97 N
ATOM 24 C4 G A 649 39.574 82.013 36.503 1.00 41.40 C
ATOM 25 P U A 650 34.100 83.877 34.603 1.00 35.62 P
ATOM 26 OP1 U A 650 32.638 84.074 34.516 1.00 37.75 O
ATOM 27 OP2 U A 650 34.898 83.745 33.364 1.00 33.97 O
ATOM 28 O5' U A 650 34.684 85.063 35.484 1.00 37.64 O
TER

ATOM 1 O3' G B 672 50.384 87.379 39.883 1.00 37.43 O
ATOM 2 P C B 673 50.598 85.840 40.273 1.00 38.20 P
ATOM 3 OP1 C B 673 51.656 85.783 41.308 1.00 40.23 O
ATOM 4 OP2 C B 673 50.758 85.054 39.030 1.00 39.28 O
ATOM 5 O5' C B 673 49.215 85.439 40.945 1.00 37.58 O
ATOM 6 C5' C B 673 48.815 86.025 42.184 1.00 35.17 C
ATOM 7 C4' C B 673 47.359 85.765 42.436 1.00 35.93 C
ATOM 8 O4' C B 673 46.574 86.409 41.405 1.00 37.13 O
ATOM 9 C3' C B 673 46.917 84.316 42.356 1.00 37.64 C
ATOM 10 O3' C B 673 47.222 83.590 43.533 1.00 38.78 O
ATOM 11 C2' C B 673 45.420 84.464 42.122 1.00 39.16 C
ATOM 12 O2' C B 673 44.678 84.816 43.271 1.00 40.21 O
ATOM 13 C1' C B 673 45.399 85.645 41.158 1.00 38.68 C
ATOM 14 N1 C B 673 45.402 85.178 39.760 1.00 37.84 N
ATOM 15 C2 C B 673 44.182 84.895 39.156 1.00 36.62 C
ATOM 16 O2 C B 673 43.140 85.071 39.803 1.00 37.70 O
ATOM 17 N3 C B 673 44.163 84.435 37.887 1.00 36.71 N
ATOM 18 C4 C B 673 45.305 84.257 37.226 1.00 37.39 C
ATOM 19 N4 C B 673 45.239 83.778 35.985 1.00 37.94 N
ATOM 20 C5 C B 673 46.566 84.555 37.811 1.00 38.74 C
ATOM 21 C6 C B 673 46.570 85.010 39.069 1.00 38.57 C
ATOM 22 P A B 674 47.563 82.027 43.430 1.00 40.53 P
ATOM 23 OP1 A B 674 47.836 81.558 44.811 1.00 40.94 O
ATOM 24 OP2 A B 674 48.580 81.816 42.369 1.00 39.46 O
ATOM 25 O5' A B 674 46.183 81.378 42.973 1.00 42.18 O
TER

Atoms:
OP1: (35.242,76.744,32.098)
OP2: (37.134,78.477,32.240)
C3': (35.657,81.957,35.427)
C1': (37.351,80.810,36.574)
C5': (35.364,80.140,33.708)
O6: (42.676,83.132,35.094)
O4': (36.711,79.887,35.716)
C8: (39.053,80.883,34.689)
C2: (40.620,83.257,38.000)
C6: (41.698,82.906,35.821)
C5: (40.550,82.131,35.538)
C4: (39.574,82.013,36.503)
P: (36.034,77.725,32.891)
C4': (35.494,80.472,35.179)
C2': (36.404,81.995,36.745)
O2': (35.567,81.787,37.859)
N1: (41.644,83.445,37.103)
N2: (40.759,83.833,39.203)
N3: (39.542,82.547,37.742)
N7: (40.210,81.411,34.402)
N9: (38.606,81.212,35.947)
O5': (35.009,78.761,33.527)
O3': (34.386,82.580,35.490)
C2: (44.182,84.895,39.156)
OP1: (51.656,85.783,41.308)
OP2: (50.758,85.054,39.030)
C4: (45.305,84.257,37.226)
O5': (49.215,85.439,40.945)
C3': (46.917,84.316,42.356)
C1': (45.399,85.645,41.158)
O4': (46.574,86.409,41.405)
C5': (48.815,86.025,42.184)
P: (50.598,85.840,40.273)
O2: (43.140,85.071,39.803)
C4': (47.359,85.765,42.436)
C2': (45.420,84.464,42.122)
O2': (44.678,84.816,43.271)
N1: (45.402,85.178,39.760)
N3: (44.163,84.435,37.887)
N4: (45.239,83.778,35.985)
C6: (46.570,85.010,39.069)
C5: (46.566,84.555,37.811)
O3': (47.222,83.590,43.533)
Image (generated by PyMOL):
PyMOL image
show in jmol