ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QRT:B29:B28

Extra

PDB:
ATOM 1 O3' A A 28 9.451 -8.101 24.164 1.00 88.38 O
ATOM 2 P U A 29 10.477 -9.278 23.771 1.00 89.79 P
ATOM 3 OP1 U A 29 9.694 -10.515 23.510 1.00 90.47 O
ATOM 4 OP2 U A 29 11.534 -9.280 24.818 1.00 89.66 O
ATOM 5 O5' U A 29 11.128 -8.796 22.396 1.00 88.91 O
ATOM 6 C5' U A 29 10.346 -8.705 21.208 1.00 87.13 C
ATOM 7 C4' U A 29 11.228 -8.407 20.015 1.00 86.26 C
ATOM 8 O4' U A 29 11.862 -7.108 20.175 1.00 85.49 O
ATOM 9 C3' U A 29 12.410 -9.336 19.807 1.00 85.53 C
ATOM 10 O3' U A 29 12.045 -10.554 19.180 1.00 85.25 O
ATOM 11 C2' U A 29 13.309 -8.502 18.905 1.00 85.15 C
ATOM 12 O2' U A 29 12.905 -8.520 17.550 1.00 84.65 O
ATOM 13 C1' U A 29 13.118 -7.107 19.502 1.00 85.03 C
ATOM 14 N1 U A 29 14.184 -6.786 20.465 1.00 84.29 N
ATOM 15 C2 U A 29 15.331 -6.185 19.973 1.00 83.93 C
ATOM 16 O2 U A 29 15.475 -5.882 18.802 1.00 84.19 O
ATOM 17 N3 U A 29 16.306 -5.948 20.906 1.00 83.42 N
ATOM 18 C4 U A 29 16.252 -6.235 22.250 1.00 83.47 C
ATOM 19 O4 U A 29 17.222 -5.971 22.959 1.00 83.71 O
ATOM 20 C5 U A 29 15.031 -6.839 22.685 1.00 83.39 C
ATOM 21 C6 U A 29 14.062 -7.087 21.800 1.00 83.97 C
ATOM 22 P U A 30 12.943 -11.863 19.428 1.00 85.55 P
ATOM 23 OP1 U A 30 12.394 -12.979 18.614 1.00 86.65 O
ATOM 24 OP2 U A 30 13.063 -12.013 20.895 1.00 85.16 O
ATOM 25 O5' U A 30 14.372 -11.486 18.826 1.00 84.03 O
TER

ATOM 1 O3' G B 27 10.411 -5.461 29.754 1.00 86.67 O
ATOM 2 P A B 28 10.989 -6.563 28.730 1.00 88.28 P
ATOM 3 OP1 A B 28 10.326 -7.862 29.011 1.00 89.55 O
ATOM 4 OP2 A B 28 12.473 -6.475 28.784 1.00 88.09 O
ATOM 5 O5' A B 28 10.517 -6.065 27.288 1.00 87.52 O
ATOM 6 C5' A B 28 9.171 -6.249 26.848 1.00 87.21 C
ATOM 7 C4' A B 28 9.054 -5.989 25.359 1.00 87.42 C
ATOM 8 O4' A B 28 9.449 -4.615 25.075 1.00 88.02 O
ATOM 9 C3' A B 28 9.956 -6.806 24.448 1.00 87.39 C
ATOM 10 O3' A B 28 9.451 -8.101 24.164 1.00 88.38 O
ATOM 11 C2' A B 28 9.990 -5.947 23.195 1.00 87.34 C
ATOM 12 O2' A B 28 8.808 -6.045 22.425 1.00 86.49 O
ATOM 13 C1' A B 28 10.101 -4.553 23.809 1.00 87.87 C
ATOM 14 N9 A B 28 11.505 -4.175 24.010 1.00 88.09 N
ATOM 15 C8 A B 28 12.185 -3.988 25.192 1.00 88.03 C
ATOM 16 N7 A B 28 13.450 -3.675 25.032 1.00 87.45 N
ATOM 17 C5 A B 28 13.614 -3.648 23.654 1.00 87.46 C
ATOM 18 C6 A B 28 14.728 -3.380 22.841 1.00 87.35 C
ATOM 19 N6 A B 28 15.934 -3.069 23.319 1.00 87.75 N
ATOM 20 N1 A B 28 14.558 -3.443 21.503 1.00 87.39 N
ATOM 21 C2 A B 28 13.346 -3.749 21.024 1.00 87.20 C
ATOM 22 N3 A B 28 12.223 -4.017 21.685 1.00 87.48 N
ATOM 23 C4 A B 28 12.426 -3.951 23.012 1.00 87.64 C
ATOM 24 P U B 29 10.477 -9.278 23.771 1.00 89.79 P
ATOM 25 OP1 U B 29 9.694 -10.515 23.510 1.00 90.47 O
ATOM 26 OP2 U B 29 11.534 -9.280 24.818 1.00 89.66 O
ATOM 27 O5' U B 29 11.128 -8.796 22.396 1.00 88.91 O
TER

Atoms:
C4: (16.252,-6.235,22.250)
N3: (16.306,-5.948,20.906)
OP1: (9.694,-10.515,23.510)
OP2: (11.534,-9.280,24.818)
C2: (15.331,-6.185,19.973)
C1': (13.118,-7.107,19.502)
C3': (12.410,-9.336,19.807)
O5': (11.128,-8.796,22.396)
O4': (11.862,-7.108,20.175)
C5': (10.346,-8.705,21.208)
P: (10.477,-9.278,23.771)
C4': (11.228,-8.407,20.015)
C2': (13.309,-8.502,18.905)
O2': (12.905,-8.520,17.550)
N1: (14.184,-6.786,20.465)
O4: (17.222,-5.971,22.959)
O2: (15.475,-5.882,18.802)
C6: (14.062,-7.087,21.800)
C5: (15.031,-6.839,22.685)
O3': (12.045,-10.554,19.180)
OP1: (10.326,-7.862,29.011)
OP2: (12.473,-6.475,28.784)
C3': (9.956,-6.806,24.448)
C1': (10.101,-4.553,23.809)
C5': (9.171,-6.249,26.848)
O4': (9.449,-4.615,25.075)
C8: (12.185,-3.988,25.192)
O2': (8.808,-6.045,22.425)
C6: (14.728,-3.380,22.841)
C5: (13.614,-3.648,23.654)
C4: (12.426,-3.951,23.012)
P: (10.989,-6.563,28.730)
C4': (9.054,-5.989,25.359)
C2': (9.990,-5.947,23.195)
C2: (13.346,-3.749,21.024)
N1: (14.558,-3.443,21.503)
N3: (12.223,-4.017,21.685)
N6: (15.934,-3.069,23.319)
N7: (13.450,-3.675,25.032)
N9: (11.505,-4.175,24.010)
O5': (10.517,-6.065,27.288)
O3': (9.451,-8.101,24.164)
Image (generated by PyMOL):
PyMOL image
show in jmol