Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HHN:E56:E125
Extra
PDB:
ATOM 1 O3' U A 55 51.973 15.856 -34.124 1.00 64.43 O
ATOM 2 P G A 56 50.920 15.684 -32.930 1.00 70.76 P
ATOM 3 OP1 G A 56 51.057 16.854 -32.034 1.00 64.98 O
ATOM 4 OP2 G A 56 51.045 14.310 -32.390 1.00 54.12 O
ATOM 5 O5' G A 56 49.520 15.791 -33.690 1.00 62.66 O
ATOM 6 C5' G A 56 49.320 16.811 -34.653 1.00 67.47 C
ATOM 7 C4' G A 56 48.219 16.396 -35.605 1.00 68.64 C
ATOM 8 O4' G A 56 48.703 15.355 -36.488 1.00 60.59 O
ATOM 9 C3' G A 56 47.017 15.758 -34.933 1.00 70.77 C
ATOM 10 O3' G A 56 46.157 16.750 -34.391 1.00 71.74 O
ATOM 11 C2' G A 56 46.387 15.032 -36.116 1.00 75.46 C
ATOM 12 O2' G A 56 45.660 15.897 -36.966 1.00 79.02 O
ATOM 13 C1' G A 56 47.625 14.505 -36.835 1.00 62.79 C
ATOM 14 N9 G A 56 47.954 13.138 -36.448 1.00 54.40 N
ATOM 15 C8 G A 56 48.890 12.735 -35.529 1.00 58.16 C
ATOM 16 N7 G A 56 48.954 11.439 -35.394 1.00 61.92 N
ATOM 17 C5 G A 56 47.998 10.953 -36.277 1.00 56.72 C
ATOM 18 C6 G A 56 47.613 9.623 -36.568 1.00 59.93 C
ATOM 19 O6 G A 56 48.056 8.571 -36.085 1.00 60.66 O
ATOM 20 N1 G A 56 46.604 9.577 -37.527 1.00 55.34 N
ATOM 21 C2 G A 56 46.039 10.676 -38.129 1.00 56.21 C
ATOM 22 N2 G A 56 45.077 10.434 -39.032 1.00 59.48 N
ATOM 23 N3 G A 56 46.391 11.927 -37.865 1.00 57.05 N
ATOM 24 C4 G A 56 47.372 11.989 -36.933 1.00 56.01 C
ATOM 25 P A A 57 45.138 16.339 -33.229 1.00 72.08 P
ATOM 26 OP1 A A 57 44.541 17.577 -32.680 1.00 72.77 O
ATOM 27 OP2 A A 57 45.828 15.393 -32.325 1.00 76.99 O
ATOM 28 O5' A A 57 44.004 15.554 -34.038 1.00 63.18 O
TER
ATOM 1 O3' U B 124 42.814 0.247 -39.970 1.00 78.34 O
ATOM 2 P C B 125 43.997 0.591 -40.991 1.00 91.08 P
ATOM 3 OP1 C B 125 43.850 -0.288 -42.173 1.00 93.05 O
ATOM 4 OP2 C B 125 45.270 0.602 -40.235 1.00 73.84 O
ATOM 5 O5' C B 125 43.651 2.088 -41.430 1.00 72.46 O
ATOM 6 C5' C B 125 42.413 2.377 -42.066 1.00 75.36 C
ATOM 7 C4' C B 125 42.207 3.876 -42.180 1.00 74.16 C
ATOM 8 O4' C B 125 42.113 4.462 -40.857 1.00 73.97 O
ATOM 9 C3' C B 125 43.352 4.629 -42.837 1.00 72.89 C
ATOM 10 O3' C B 125 43.248 4.558 -44.254 1.00 62.93 O
ATOM 11 C2' C B 125 43.113 6.039 -42.306 1.00 70.84 C
ATOM 12 O2' C B 125 42.063 6.708 -42.977 1.00 69.05 O
ATOM 13 C1' C B 125 42.707 5.748 -40.864 1.00 72.21 C
ATOM 14 N1 C B 125 43.861 5.755 -39.916 1.00 74.42 N
ATOM 15 C2 C B 125 44.313 6.969 -39.382 1.00 69.02 C
ATOM 16 O2 C B 125 43.748 8.021 -39.704 1.00 64.36 O
ATOM 17 N3 C B 125 45.363 6.955 -38.522 1.00 68.10 N
ATOM 18 C4 C B 125 45.949 5.801 -38.198 1.00 67.48 C
ATOM 19 N4 C B 125 46.981 5.838 -37.347 1.00 60.69 N
ATOM 20 C5 C B 125 45.502 4.556 -38.731 1.00 64.43 C
ATOM 21 C6 C B 125 44.467 4.581 -39.577 1.00 69.28 C
ATOM 22 P A B 126 44.577 4.576 -45.146 1.00 81.05 P
ATOM 23 OP1 A B 126 44.188 4.268 -46.539 1.00 82.21 O
ATOM 24 OP2 A B 126 45.606 3.759 -44.464 1.00 68.01 O
ATOM 25 O5' A B 126 45.024 6.109 -45.090 1.00 72.16 O
TER
ATOM 2 P G A 56 50.920 15.684 -32.930 1.00 70.76 P
ATOM 3 OP1 G A 56 51.057 16.854 -32.034 1.00 64.98 O
ATOM 4 OP2 G A 56 51.045 14.310 -32.390 1.00 54.12 O
ATOM 5 O5' G A 56 49.520 15.791 -33.690 1.00 62.66 O
ATOM 6 C5' G A 56 49.320 16.811 -34.653 1.00 67.47 C
ATOM 7 C4' G A 56 48.219 16.396 -35.605 1.00 68.64 C
ATOM 8 O4' G A 56 48.703 15.355 -36.488 1.00 60.59 O
ATOM 9 C3' G A 56 47.017 15.758 -34.933 1.00 70.77 C
ATOM 10 O3' G A 56 46.157 16.750 -34.391 1.00 71.74 O
ATOM 11 C2' G A 56 46.387 15.032 -36.116 1.00 75.46 C
ATOM 12 O2' G A 56 45.660 15.897 -36.966 1.00 79.02 O
ATOM 13 C1' G A 56 47.625 14.505 -36.835 1.00 62.79 C
ATOM 14 N9 G A 56 47.954 13.138 -36.448 1.00 54.40 N
ATOM 15 C8 G A 56 48.890 12.735 -35.529 1.00 58.16 C
ATOM 16 N7 G A 56 48.954 11.439 -35.394 1.00 61.92 N
ATOM 17 C5 G A 56 47.998 10.953 -36.277 1.00 56.72 C
ATOM 18 C6 G A 56 47.613 9.623 -36.568 1.00 59.93 C
ATOM 19 O6 G A 56 48.056 8.571 -36.085 1.00 60.66 O
ATOM 20 N1 G A 56 46.604 9.577 -37.527 1.00 55.34 N
ATOM 21 C2 G A 56 46.039 10.676 -38.129 1.00 56.21 C
ATOM 22 N2 G A 56 45.077 10.434 -39.032 1.00 59.48 N
ATOM 23 N3 G A 56 46.391 11.927 -37.865 1.00 57.05 N
ATOM 24 C4 G A 56 47.372 11.989 -36.933 1.00 56.01 C
ATOM 25 P A A 57 45.138 16.339 -33.229 1.00 72.08 P
ATOM 26 OP1 A A 57 44.541 17.577 -32.680 1.00 72.77 O
ATOM 27 OP2 A A 57 45.828 15.393 -32.325 1.00 76.99 O
ATOM 28 O5' A A 57 44.004 15.554 -34.038 1.00 63.18 O
TER
ATOM 1 O3' U B 124 42.814 0.247 -39.970 1.00 78.34 O
ATOM 2 P C B 125 43.997 0.591 -40.991 1.00 91.08 P
ATOM 3 OP1 C B 125 43.850 -0.288 -42.173 1.00 93.05 O
ATOM 4 OP2 C B 125 45.270 0.602 -40.235 1.00 73.84 O
ATOM 5 O5' C B 125 43.651 2.088 -41.430 1.00 72.46 O
ATOM 6 C5' C B 125 42.413 2.377 -42.066 1.00 75.36 C
ATOM 7 C4' C B 125 42.207 3.876 -42.180 1.00 74.16 C
ATOM 8 O4' C B 125 42.113 4.462 -40.857 1.00 73.97 O
ATOM 9 C3' C B 125 43.352 4.629 -42.837 1.00 72.89 C
ATOM 10 O3' C B 125 43.248 4.558 -44.254 1.00 62.93 O
ATOM 11 C2' C B 125 43.113 6.039 -42.306 1.00 70.84 C
ATOM 12 O2' C B 125 42.063 6.708 -42.977 1.00 69.05 O
ATOM 13 C1' C B 125 42.707 5.748 -40.864 1.00 72.21 C
ATOM 14 N1 C B 125 43.861 5.755 -39.916 1.00 74.42 N
ATOM 15 C2 C B 125 44.313 6.969 -39.382 1.00 69.02 C
ATOM 16 O2 C B 125 43.748 8.021 -39.704 1.00 64.36 O
ATOM 17 N3 C B 125 45.363 6.955 -38.522 1.00 68.10 N
ATOM 18 C4 C B 125 45.949 5.801 -38.198 1.00 67.48 C
ATOM 19 N4 C B 125 46.981 5.838 -37.347 1.00 60.69 N
ATOM 20 C5 C B 125 45.502 4.556 -38.731 1.00 64.43 C
ATOM 21 C6 C B 125 44.467 4.581 -39.577 1.00 69.28 C
ATOM 22 P A B 126 44.577 4.576 -45.146 1.00 81.05 P
ATOM 23 OP1 A B 126 44.188 4.268 -46.539 1.00 82.21 O
ATOM 24 OP2 A B 126 45.606 3.759 -44.464 1.00 68.01 O
ATOM 25 O5' A B 126 45.024 6.109 -45.090 1.00 72.16 O
TER
Atoms:
OP1: (51.057,16.854,-32.034)
OP2: (51.045,14.310,-32.390)
C3': (47.017,15.758,-34.933)
C1': (47.625,14.505,-36.835)
C5': (49.320,16.811,-34.653)
O6: (48.056,8.571,-36.085)
O4': (48.703,15.355,-36.488)
C8: (48.890,12.735,-35.529)
C2: (46.039,10.676,-38.129)
C6: (47.613,9.623,-36.568)
C5: (47.998,10.953,-36.277)
C4: (47.372,11.989,-36.933)
P: (50.920,15.684,-32.930)
C4': (48.219,16.396,-35.605)
C2': (46.387,15.032,-36.116)
O2': (45.660,15.897,-36.966)
N1: (46.604,9.577,-37.527)
N2: (45.077,10.434,-39.032)
N3: (46.391,11.927,-37.865)
N7: (48.954,11.439,-35.394)
N9: (47.954,13.138,-36.448)
O5': (49.520,15.791,-33.690)
O3': (46.157,16.750,-34.391)
OP2: (51.045,14.310,-32.390)
C3': (47.017,15.758,-34.933)
C1': (47.625,14.505,-36.835)
C5': (49.320,16.811,-34.653)
O6: (48.056,8.571,-36.085)
O4': (48.703,15.355,-36.488)
C8: (48.890,12.735,-35.529)
C2: (46.039,10.676,-38.129)
C6: (47.613,9.623,-36.568)
C5: (47.998,10.953,-36.277)
C4: (47.372,11.989,-36.933)
P: (50.920,15.684,-32.930)
C4': (48.219,16.396,-35.605)
C2': (46.387,15.032,-36.116)
O2': (45.660,15.897,-36.966)
N1: (46.604,9.577,-37.527)
N2: (45.077,10.434,-39.032)
N3: (46.391,11.927,-37.865)
N7: (48.954,11.439,-35.394)
N9: (47.954,13.138,-36.448)
O5': (49.520,15.791,-33.690)
O3': (46.157,16.750,-34.391)
C2: (44.313,6.969,-39.382)
OP1: (43.850,-0.288,-42.173)
OP2: (45.270,0.602,-40.235)
C4: (45.949,5.801,-38.198)
O5': (43.651,2.088,-41.430)
C3': (43.352,4.629,-42.837)
C1': (42.707,5.748,-40.864)
O4': (42.113,4.462,-40.857)
C5': (42.413,2.377,-42.066)
P: (43.997,0.591,-40.991)
O2: (43.748,8.021,-39.704)
C4': (42.207,3.876,-42.180)
C2': (43.113,6.039,-42.306)
O2': (42.063,6.708,-42.977)
N1: (43.861,5.755,-39.916)
N3: (45.363,6.955,-38.522)
N4: (46.981,5.838,-37.347)
C6: (44.467,4.581,-39.577)
C5: (45.502,4.556,-38.731)
O3': (43.248,4.558,-44.254)
OP1: (43.850,-0.288,-42.173)
OP2: (45.270,0.602,-40.235)
C4: (45.949,5.801,-38.198)
O5': (43.651,2.088,-41.430)
C3': (43.352,4.629,-42.837)
C1': (42.707,5.748,-40.864)
O4': (42.113,4.462,-40.857)
C5': (42.413,2.377,-42.066)
P: (43.997,0.591,-40.991)
O2: (43.748,8.021,-39.704)
C4': (42.207,3.876,-42.180)
C2': (43.113,6.039,-42.306)
O2': (42.063,6.708,-42.977)
N1: (43.861,5.755,-39.916)
N3: (45.363,6.955,-38.522)
N4: (46.981,5.838,-37.347)
C6: (44.467,4.581,-39.577)
C5: (45.502,4.556,-38.731)
O3': (43.248,4.558,-44.254)
Image (generated by PyMOL):