Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A220:A121
Extra
PDB:
ATOM 1 O3' U A 219 112.333 73.665 -1.397 1.00 35.92 O
ATOM 2 P G A 220 113.432 74.041 -2.505 1.00 34.85 P
ATOM 3 OP1 G A 220 114.563 74.647 -1.740 1.00 33.06 O
ATOM 4 OP2 G A 220 112.778 74.774 -3.628 1.00 33.00 O
ATOM 5 O5' G A 220 113.879 72.623 -3.037 1.00 34.41 O
ATOM 6 C5' G A 220 114.510 71.687 -2.153 1.00 34.35 C
ATOM 7 C4' G A 220 114.764 70.383 -2.862 1.00 34.52 C
ATOM 8 O4' G A 220 113.497 69.790 -3.258 1.00 34.44 O
ATOM 9 C3' G A 220 115.533 70.461 -4.171 1.00 34.98 C
ATOM 10 O3' G A 220 116.927 70.593 -4.035 1.00 35.34 O
ATOM 11 C2' G A 220 115.149 69.158 -4.847 1.00 33.88 C
ATOM 12 O2' G A 220 115.891 68.075 -4.324 1.00 34.75 O
ATOM 13 C1' G A 220 113.681 69.034 -4.447 1.00 33.02 C
ATOM 14 N9 G A 220 112.816 69.567 -5.497 1.00 30.99 N
ATOM 15 C8 G A 220 112.170 70.781 -5.525 1.00 29.91 C
ATOM 16 N7 G A 220 111.493 70.973 -6.629 1.00 29.34 N
ATOM 17 C5 G A 220 111.706 69.817 -7.369 1.00 28.76 C
ATOM 18 C6 G A 220 111.237 69.448 -8.660 1.00 29.61 C
ATOM 19 O6 G A 220 110.525 70.088 -9.436 1.00 30.85 O
ATOM 20 N1 G A 220 111.682 68.184 -9.024 1.00 29.67 N
ATOM 21 C2 G A 220 112.469 67.375 -8.249 1.00 29.26 C
ATOM 22 N2 G A 220 112.760 66.178 -8.767 1.00 27.78 N
ATOM 23 N3 G A 220 112.927 67.711 -7.053 1.00 28.68 N
ATOM 24 C4 G A 220 112.508 68.936 -6.680 1.00 29.11 C
ATOM 25 P G A 221 117.731 71.483 -5.108 1.00 35.92 P
ATOM 26 OP1 G A 221 119.119 71.515 -4.565 1.00 37.07 O
ATOM 27 OP2 G A 221 116.997 72.750 -5.346 1.00 34.92 O
ATOM 28 O5' G A 221 117.672 70.633 -6.472 1.00 33.46 O
TER
ATOM 1 O3' C B 120 107.903 64.772 -17.608 1.00 34.45 O
ATOM 2 P C B 121 106.744 64.639 -16.507 1.00 34.60 P
ATOM 3 OP1 C B 121 105.798 63.627 -17.084 1.00 33.98 O
ATOM 4 OP2 C B 121 106.272 65.994 -16.138 1.00 32.87 O
ATOM 5 O5' C B 121 107.495 64.018 -15.256 1.00 34.26 O
ATOM 6 C5' C B 121 108.223 62.790 -15.390 1.00 35.04 C
ATOM 7 C4' C B 121 109.234 62.647 -14.279 1.00 34.79 C
ATOM 8 O4' C B 121 110.246 63.678 -14.406 1.00 34.54 O
ATOM 9 C3' C B 121 108.713 62.803 -12.859 1.00 34.32 C
ATOM 10 O3' C B 121 108.126 61.618 -12.373 1.00 33.89 O
ATOM 11 C2' C B 121 109.974 63.180 -12.093 1.00 34.12 C
ATOM 12 O2' C B 121 110.778 62.066 -11.758 1.00 34.50 O
ATOM 13 C1' C B 121 110.710 64.048 -13.119 1.00 33.13 C
ATOM 14 N1 C B 121 110.424 65.476 -12.902 1.00 30.97 N
ATOM 15 C2 C B 121 110.960 66.104 -11.758 1.00 30.47 C
ATOM 16 O2 C B 121 111.736 65.461 -11.025 1.00 29.88 O
ATOM 17 N3 C B 121 110.626 67.391 -11.493 1.00 27.91 N
ATOM 18 C4 C B 121 109.823 68.053 -12.327 1.00 26.03 C
ATOM 19 N4 C B 121 109.492 69.308 -12.009 1.00 24.54 N
ATOM 20 C5 C B 121 109.313 67.457 -13.522 1.00 26.75 C
ATOM 21 C6 C B 121 109.632 66.181 -13.766 1.00 28.03 C
ATOM 22 P U B 122 106.966 61.701 -11.254 1.00 34.18 P
ATOM 23 OP1 U B 122 106.614 60.280 -10.970 1.00 36.47 O
ATOM 24 OP2 U B 122 105.892 62.640 -11.691 1.00 33.18 O
ATOM 25 O5' U B 122 107.703 62.285 -9.973 1.00 30.58 O
TER
ATOM 2 P G A 220 113.432 74.041 -2.505 1.00 34.85 P
ATOM 3 OP1 G A 220 114.563 74.647 -1.740 1.00 33.06 O
ATOM 4 OP2 G A 220 112.778 74.774 -3.628 1.00 33.00 O
ATOM 5 O5' G A 220 113.879 72.623 -3.037 1.00 34.41 O
ATOM 6 C5' G A 220 114.510 71.687 -2.153 1.00 34.35 C
ATOM 7 C4' G A 220 114.764 70.383 -2.862 1.00 34.52 C
ATOM 8 O4' G A 220 113.497 69.790 -3.258 1.00 34.44 O
ATOM 9 C3' G A 220 115.533 70.461 -4.171 1.00 34.98 C
ATOM 10 O3' G A 220 116.927 70.593 -4.035 1.00 35.34 O
ATOM 11 C2' G A 220 115.149 69.158 -4.847 1.00 33.88 C
ATOM 12 O2' G A 220 115.891 68.075 -4.324 1.00 34.75 O
ATOM 13 C1' G A 220 113.681 69.034 -4.447 1.00 33.02 C
ATOM 14 N9 G A 220 112.816 69.567 -5.497 1.00 30.99 N
ATOM 15 C8 G A 220 112.170 70.781 -5.525 1.00 29.91 C
ATOM 16 N7 G A 220 111.493 70.973 -6.629 1.00 29.34 N
ATOM 17 C5 G A 220 111.706 69.817 -7.369 1.00 28.76 C
ATOM 18 C6 G A 220 111.237 69.448 -8.660 1.00 29.61 C
ATOM 19 O6 G A 220 110.525 70.088 -9.436 1.00 30.85 O
ATOM 20 N1 G A 220 111.682 68.184 -9.024 1.00 29.67 N
ATOM 21 C2 G A 220 112.469 67.375 -8.249 1.00 29.26 C
ATOM 22 N2 G A 220 112.760 66.178 -8.767 1.00 27.78 N
ATOM 23 N3 G A 220 112.927 67.711 -7.053 1.00 28.68 N
ATOM 24 C4 G A 220 112.508 68.936 -6.680 1.00 29.11 C
ATOM 25 P G A 221 117.731 71.483 -5.108 1.00 35.92 P
ATOM 26 OP1 G A 221 119.119 71.515 -4.565 1.00 37.07 O
ATOM 27 OP2 G A 221 116.997 72.750 -5.346 1.00 34.92 O
ATOM 28 O5' G A 221 117.672 70.633 -6.472 1.00 33.46 O
TER
ATOM 1 O3' C B 120 107.903 64.772 -17.608 1.00 34.45 O
ATOM 2 P C B 121 106.744 64.639 -16.507 1.00 34.60 P
ATOM 3 OP1 C B 121 105.798 63.627 -17.084 1.00 33.98 O
ATOM 4 OP2 C B 121 106.272 65.994 -16.138 1.00 32.87 O
ATOM 5 O5' C B 121 107.495 64.018 -15.256 1.00 34.26 O
ATOM 6 C5' C B 121 108.223 62.790 -15.390 1.00 35.04 C
ATOM 7 C4' C B 121 109.234 62.647 -14.279 1.00 34.79 C
ATOM 8 O4' C B 121 110.246 63.678 -14.406 1.00 34.54 O
ATOM 9 C3' C B 121 108.713 62.803 -12.859 1.00 34.32 C
ATOM 10 O3' C B 121 108.126 61.618 -12.373 1.00 33.89 O
ATOM 11 C2' C B 121 109.974 63.180 -12.093 1.00 34.12 C
ATOM 12 O2' C B 121 110.778 62.066 -11.758 1.00 34.50 O
ATOM 13 C1' C B 121 110.710 64.048 -13.119 1.00 33.13 C
ATOM 14 N1 C B 121 110.424 65.476 -12.902 1.00 30.97 N
ATOM 15 C2 C B 121 110.960 66.104 -11.758 1.00 30.47 C
ATOM 16 O2 C B 121 111.736 65.461 -11.025 1.00 29.88 O
ATOM 17 N3 C B 121 110.626 67.391 -11.493 1.00 27.91 N
ATOM 18 C4 C B 121 109.823 68.053 -12.327 1.00 26.03 C
ATOM 19 N4 C B 121 109.492 69.308 -12.009 1.00 24.54 N
ATOM 20 C5 C B 121 109.313 67.457 -13.522 1.00 26.75 C
ATOM 21 C6 C B 121 109.632 66.181 -13.766 1.00 28.03 C
ATOM 22 P U B 122 106.966 61.701 -11.254 1.00 34.18 P
ATOM 23 OP1 U B 122 106.614 60.280 -10.970 1.00 36.47 O
ATOM 24 OP2 U B 122 105.892 62.640 -11.691 1.00 33.18 O
ATOM 25 O5' U B 122 107.703 62.285 -9.973 1.00 30.58 O
TER
Atoms:
OP1: (114.563,74.647,-1.740)
OP2: (112.778,74.774,-3.628)
C3': (115.533,70.461,-4.171)
C1': (113.681,69.034,-4.447)
C5': (114.510,71.687,-2.153)
O6: (110.525,70.088,-9.436)
O4': (113.497,69.790,-3.258)
C8: (112.170,70.781,-5.525)
C2: (112.469,67.375,-8.249)
C6: (111.237,69.448,-8.660)
C5: (111.706,69.817,-7.369)
C4: (112.508,68.936,-6.680)
P: (113.432,74.041,-2.505)
C4': (114.764,70.383,-2.862)
C2': (115.149,69.158,-4.847)
O2': (115.891,68.075,-4.324)
N1: (111.682,68.184,-9.024)
N2: (112.760,66.178,-8.767)
N3: (112.927,67.711,-7.053)
N7: (111.493,70.973,-6.629)
N9: (112.816,69.567,-5.497)
O5': (113.879,72.623,-3.037)
O3': (116.927,70.593,-4.035)
OP2: (112.778,74.774,-3.628)
C3': (115.533,70.461,-4.171)
C1': (113.681,69.034,-4.447)
C5': (114.510,71.687,-2.153)
O6: (110.525,70.088,-9.436)
O4': (113.497,69.790,-3.258)
C8: (112.170,70.781,-5.525)
C2: (112.469,67.375,-8.249)
C6: (111.237,69.448,-8.660)
C5: (111.706,69.817,-7.369)
C4: (112.508,68.936,-6.680)
P: (113.432,74.041,-2.505)
C4': (114.764,70.383,-2.862)
C2': (115.149,69.158,-4.847)
O2': (115.891,68.075,-4.324)
N1: (111.682,68.184,-9.024)
N2: (112.760,66.178,-8.767)
N3: (112.927,67.711,-7.053)
N7: (111.493,70.973,-6.629)
N9: (112.816,69.567,-5.497)
O5': (113.879,72.623,-3.037)
O3': (116.927,70.593,-4.035)
C2: (110.960,66.104,-11.758)
OP1: (105.798,63.627,-17.084)
OP2: (106.272,65.994,-16.138)
C4: (109.823,68.053,-12.327)
O5': (107.495,64.018,-15.256)
C3': (108.713,62.803,-12.859)
C1': (110.710,64.048,-13.119)
O4': (110.246,63.678,-14.406)
C5': (108.223,62.790,-15.390)
P: (106.744,64.639,-16.507)
O2: (111.736,65.461,-11.025)
C4': (109.234,62.647,-14.279)
C2': (109.974,63.180,-12.093)
O2': (110.778,62.066,-11.758)
N1: (110.424,65.476,-12.902)
N3: (110.626,67.391,-11.493)
N4: (109.492,69.308,-12.009)
C6: (109.632,66.181,-13.766)
C5: (109.313,67.457,-13.522)
O3': (108.126,61.618,-12.373)
OP1: (105.798,63.627,-17.084)
OP2: (106.272,65.994,-16.138)
C4: (109.823,68.053,-12.327)
O5': (107.495,64.018,-15.256)
C3': (108.713,62.803,-12.859)
C1': (110.710,64.048,-13.119)
O4': (110.246,63.678,-14.406)
C5': (108.223,62.790,-15.390)
P: (106.744,64.639,-16.507)
O2: (111.736,65.461,-11.025)
C4': (109.234,62.647,-14.279)
C2': (109.974,63.180,-12.093)
O2': (110.778,62.066,-11.758)
N1: (110.424,65.476,-12.902)
N3: (110.626,67.391,-11.493)
N4: (109.492,69.308,-12.009)
C6: (109.632,66.181,-13.766)
C5: (109.313,67.457,-13.522)
O3': (108.126,61.618,-12.373)
Image (generated by PyMOL):