Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01384:01398
Extra
PDB:
ATOM 1 O3' A A1383 46.121 180.074 64.659 1.00 63.66 O
ATOM 2 P G A1384 45.605 179.716 66.136 1.00 65.82 P
ATOM 3 OP1 G A1384 44.353 180.481 66.375 1.00 65.37 O
ATOM 4 OP2 G A1384 46.736 179.834 67.103 1.00 65.46 O
ATOM 5 O5' G A1384 45.256 178.171 66.017 1.00 62.81 O
ATOM 6 C5' G A1384 45.183 177.353 67.179 1.00 60.70 C
ATOM 7 C4' G A1384 45.249 175.905 66.790 1.00 59.30 C
ATOM 8 O4' G A1384 46.457 175.653 66.034 1.00 58.40 O
ATOM 9 C3' G A1384 45.318 174.965 67.972 1.00 57.67 C
ATOM 10 O3' G A1384 43.999 174.702 68.415 1.00 59.45 O
ATOM 11 C2' G A1384 46.012 173.747 67.386 1.00 56.26 C
ATOM 12 O2' G A1384 45.112 172.948 66.655 1.00 54.11 O
ATOM 13 C1' G A1384 47.006 174.404 66.419 1.00 56.72 C
ATOM 14 N9 G A1384 48.341 174.661 66.955 1.00 55.94 N
ATOM 15 C8 G A1384 48.914 175.894 67.156 1.00 56.35 C
ATOM 16 N7 G A1384 50.134 175.826 67.606 1.00 55.27 N
ATOM 17 C5 G A1384 50.382 174.468 67.716 1.00 54.28 C
ATOM 18 C6 G A1384 51.541 173.793 68.136 1.00 54.51 C
ATOM 19 O6 G A1384 52.622 174.276 68.489 1.00 54.61 O
ATOM 20 N1 G A1384 51.367 172.414 68.112 1.00 54.16 N
ATOM 21 C2 G A1384 50.221 171.772 67.722 1.00 53.75 C
ATOM 22 N2 G A1384 50.242 170.436 67.783 1.00 53.18 N
ATOM 23 N3 G A1384 49.133 172.394 67.308 1.00 54.29 N
ATOM 24 C4 G A1384 49.282 173.734 67.332 1.00 54.50 C
ATOM 25 P C A1385 43.696 174.590 69.982 1.00 61.77 P
ATOM 26 OP1 C A1385 42.234 174.739 70.178 1.00 61.49 O
ATOM 27 OP2 C A1385 44.624 175.496 70.709 1.00 61.27 O
ATOM 28 O5' C A1385 44.088 173.082 70.294 1.00 62.03 O
TER
ATOM 1 O3' G B1397 60.249 167.555 67.598 1.00 43.79 O
ATOM 2 P C B1398 59.053 167.387 66.541 1.00 45.14 P
ATOM 3 OP1 C B1398 59.375 166.210 65.705 1.00 44.48 O
ATOM 4 OP2 C B1398 58.815 168.695 65.890 1.00 46.26 O
ATOM 5 O5' C B1398 57.788 167.044 67.441 1.00 44.16 O
ATOM 6 C5' C B1398 57.545 165.709 67.908 1.00 45.30 C
ATOM 7 C4' C B1398 56.089 165.547 68.258 1.00 46.56 C
ATOM 8 O4' C B1398 55.740 166.494 69.303 1.00 46.81 O
ATOM 9 C3' C B1398 55.139 165.875 67.124 1.00 47.70 C
ATOM 10 O3' C B1398 54.962 164.764 66.265 1.00 50.13 O
ATOM 11 C2' C B1398 53.875 166.278 67.865 1.00 47.36 C
ATOM 12 O2' C B1398 53.180 165.156 68.367 1.00 46.26 O
ATOM 13 C1' C B1398 54.466 167.062 69.038 1.00 46.62 C
ATOM 14 N1 C B1398 54.659 168.510 68.787 1.00 46.75 N
ATOM 15 C2 C B1398 53.561 169.378 68.872 1.00 45.34 C
ATOM 16 O2 C B1398 52.443 168.912 69.112 1.00 43.60 O
ATOM 17 N3 C B1398 53.755 170.707 68.689 1.00 45.73 N
ATOM 18 C4 C B1398 54.981 171.175 68.426 1.00 46.46 C
ATOM 19 N4 C B1398 55.137 172.492 68.280 1.00 45.16 N
ATOM 20 C5 C B1398 56.105 170.315 68.307 1.00 46.94 C
ATOM 21 C6 C B1398 55.902 169.004 68.491 1.00 47.59 C
ATOM 22 P U B1399 54.793 165.004 64.690 1.00 52.75 P
ATOM 23 OP1 U B1399 54.725 163.663 64.069 1.00 52.69 O
ATOM 24 OP2 U B1399 55.826 165.968 64.236 1.00 50.61 O
ATOM 25 O5' U B1399 53.364 165.694 64.578 1.00 52.51 O
TER
ATOM 2 P G A1384 45.605 179.716 66.136 1.00 65.82 P
ATOM 3 OP1 G A1384 44.353 180.481 66.375 1.00 65.37 O
ATOM 4 OP2 G A1384 46.736 179.834 67.103 1.00 65.46 O
ATOM 5 O5' G A1384 45.256 178.171 66.017 1.00 62.81 O
ATOM 6 C5' G A1384 45.183 177.353 67.179 1.00 60.70 C
ATOM 7 C4' G A1384 45.249 175.905 66.790 1.00 59.30 C
ATOM 8 O4' G A1384 46.457 175.653 66.034 1.00 58.40 O
ATOM 9 C3' G A1384 45.318 174.965 67.972 1.00 57.67 C
ATOM 10 O3' G A1384 43.999 174.702 68.415 1.00 59.45 O
ATOM 11 C2' G A1384 46.012 173.747 67.386 1.00 56.26 C
ATOM 12 O2' G A1384 45.112 172.948 66.655 1.00 54.11 O
ATOM 13 C1' G A1384 47.006 174.404 66.419 1.00 56.72 C
ATOM 14 N9 G A1384 48.341 174.661 66.955 1.00 55.94 N
ATOM 15 C8 G A1384 48.914 175.894 67.156 1.00 56.35 C
ATOM 16 N7 G A1384 50.134 175.826 67.606 1.00 55.27 N
ATOM 17 C5 G A1384 50.382 174.468 67.716 1.00 54.28 C
ATOM 18 C6 G A1384 51.541 173.793 68.136 1.00 54.51 C
ATOM 19 O6 G A1384 52.622 174.276 68.489 1.00 54.61 O
ATOM 20 N1 G A1384 51.367 172.414 68.112 1.00 54.16 N
ATOM 21 C2 G A1384 50.221 171.772 67.722 1.00 53.75 C
ATOM 22 N2 G A1384 50.242 170.436 67.783 1.00 53.18 N
ATOM 23 N3 G A1384 49.133 172.394 67.308 1.00 54.29 N
ATOM 24 C4 G A1384 49.282 173.734 67.332 1.00 54.50 C
ATOM 25 P C A1385 43.696 174.590 69.982 1.00 61.77 P
ATOM 26 OP1 C A1385 42.234 174.739 70.178 1.00 61.49 O
ATOM 27 OP2 C A1385 44.624 175.496 70.709 1.00 61.27 O
ATOM 28 O5' C A1385 44.088 173.082 70.294 1.00 62.03 O
TER
ATOM 1 O3' G B1397 60.249 167.555 67.598 1.00 43.79 O
ATOM 2 P C B1398 59.053 167.387 66.541 1.00 45.14 P
ATOM 3 OP1 C B1398 59.375 166.210 65.705 1.00 44.48 O
ATOM 4 OP2 C B1398 58.815 168.695 65.890 1.00 46.26 O
ATOM 5 O5' C B1398 57.788 167.044 67.441 1.00 44.16 O
ATOM 6 C5' C B1398 57.545 165.709 67.908 1.00 45.30 C
ATOM 7 C4' C B1398 56.089 165.547 68.258 1.00 46.56 C
ATOM 8 O4' C B1398 55.740 166.494 69.303 1.00 46.81 O
ATOM 9 C3' C B1398 55.139 165.875 67.124 1.00 47.70 C
ATOM 10 O3' C B1398 54.962 164.764 66.265 1.00 50.13 O
ATOM 11 C2' C B1398 53.875 166.278 67.865 1.00 47.36 C
ATOM 12 O2' C B1398 53.180 165.156 68.367 1.00 46.26 O
ATOM 13 C1' C B1398 54.466 167.062 69.038 1.00 46.62 C
ATOM 14 N1 C B1398 54.659 168.510 68.787 1.00 46.75 N
ATOM 15 C2 C B1398 53.561 169.378 68.872 1.00 45.34 C
ATOM 16 O2 C B1398 52.443 168.912 69.112 1.00 43.60 O
ATOM 17 N3 C B1398 53.755 170.707 68.689 1.00 45.73 N
ATOM 18 C4 C B1398 54.981 171.175 68.426 1.00 46.46 C
ATOM 19 N4 C B1398 55.137 172.492 68.280 1.00 45.16 N
ATOM 20 C5 C B1398 56.105 170.315 68.307 1.00 46.94 C
ATOM 21 C6 C B1398 55.902 169.004 68.491 1.00 47.59 C
ATOM 22 P U B1399 54.793 165.004 64.690 1.00 52.75 P
ATOM 23 OP1 U B1399 54.725 163.663 64.069 1.00 52.69 O
ATOM 24 OP2 U B1399 55.826 165.968 64.236 1.00 50.61 O
ATOM 25 O5' U B1399 53.364 165.694 64.578 1.00 52.51 O
TER
Atoms:
OP1: (44.353,180.481,66.375)
OP2: (46.736,179.834,67.103)
C3': (45.318,174.965,67.972)
C1': (47.006,174.404,66.419)
C5': (45.183,177.353,67.179)
O6: (52.622,174.276,68.489)
O4': (46.457,175.653,66.034)
C8: (48.914,175.894,67.156)
C2: (50.221,171.772,67.722)
C6: (51.541,173.793,68.136)
C5: (50.382,174.468,67.716)
C4: (49.282,173.734,67.332)
P: (45.605,179.716,66.136)
C4': (45.249,175.905,66.790)
C2': (46.012,173.747,67.386)
O2': (45.112,172.948,66.655)
N1: (51.367,172.414,68.112)
N2: (50.242,170.436,67.783)
N3: (49.133,172.394,67.308)
N7: (50.134,175.826,67.606)
N9: (48.341,174.661,66.955)
O5': (45.256,178.171,66.017)
O3': (43.999,174.702,68.415)
OP2: (46.736,179.834,67.103)
C3': (45.318,174.965,67.972)
C1': (47.006,174.404,66.419)
C5': (45.183,177.353,67.179)
O6: (52.622,174.276,68.489)
O4': (46.457,175.653,66.034)
C8: (48.914,175.894,67.156)
C2: (50.221,171.772,67.722)
C6: (51.541,173.793,68.136)
C5: (50.382,174.468,67.716)
C4: (49.282,173.734,67.332)
P: (45.605,179.716,66.136)
C4': (45.249,175.905,66.790)
C2': (46.012,173.747,67.386)
O2': (45.112,172.948,66.655)
N1: (51.367,172.414,68.112)
N2: (50.242,170.436,67.783)
N3: (49.133,172.394,67.308)
N7: (50.134,175.826,67.606)
N9: (48.341,174.661,66.955)
O5': (45.256,178.171,66.017)
O3': (43.999,174.702,68.415)
C2: (53.561,169.378,68.872)
OP1: (59.375,166.210,65.705)
OP2: (58.815,168.695,65.890)
C4: (54.981,171.175,68.426)
O5': (57.788,167.044,67.441)
C3': (55.139,165.875,67.124)
C1': (54.466,167.062,69.038)
O4': (55.740,166.494,69.303)
C5': (57.545,165.709,67.908)
P: (59.053,167.387,66.541)
O2: (52.443,168.912,69.112)
C4': (56.089,165.547,68.258)
C2': (53.875,166.278,67.865)
O2': (53.180,165.156,68.367)
N1: (54.659,168.510,68.787)
N3: (53.755,170.707,68.689)
N4: (55.137,172.492,68.280)
C6: (55.902,169.004,68.491)
C5: (56.105,170.315,68.307)
O3': (54.962,164.764,66.265)
OP1: (59.375,166.210,65.705)
OP2: (58.815,168.695,65.890)
C4: (54.981,171.175,68.426)
O5': (57.788,167.044,67.441)
C3': (55.139,165.875,67.124)
C1': (54.466,167.062,69.038)
O4': (55.740,166.494,69.303)
C5': (57.545,165.709,67.908)
P: (59.053,167.387,66.541)
O2: (52.443,168.912,69.112)
C4': (56.089,165.547,68.258)
C2': (53.875,166.278,67.865)
O2': (53.180,165.156,68.367)
N1: (54.659,168.510,68.787)
N3: (53.755,170.707,68.689)
N4: (55.137,172.492,68.280)
C6: (55.902,169.004,68.491)
C5: (56.105,170.315,68.307)
O3': (54.962,164.764,66.265)
Image (generated by PyMOL):