Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:Z51:X4
Extra
PDB:
ATOM 1 O3' A A 50 -3.006 -49.589 -87.554 1.00166.19 O
ATOM 2 P G A 51 -3.775 -48.200 -87.336 1.00129.19 P
ATOM 3 OP1 G A 51 -3.360 -47.298 -88.435 1.00115.28 O
ATOM 4 OP2 G A 51 -3.525 -47.777 -85.937 1.00128.39 O
ATOM 5 O5' G A 51 -5.306 -48.618 -87.512 1.00127.08 O
ATOM 6 C5' G A 51 -5.762 -49.203 -88.724 1.00121.15 C
ATOM 7 C4' G A 51 -6.952 -50.115 -88.514 1.00119.83 C
ATOM 8 O4' G A 51 -6.682 -51.079 -87.467 1.00127.90 O
ATOM 9 C3' G A 51 -8.244 -49.462 -88.059 1.00128.21 C
ATOM 10 O3' G A 51 -8.914 -48.767 -89.095 1.00127.30 O
ATOM 11 C2' G A 51 -9.027 -50.655 -87.516 1.00130.92 C
ATOM 12 O2' G A 51 -9.610 -51.399 -88.576 1.00122.80 O
ATOM 13 C1' G A 51 -7.909 -51.499 -86.898 1.00134.96 C
ATOM 14 N9 G A 51 -7.849 -51.350 -85.432 1.00129.77 N
ATOM 15 C8 G A 51 -6.978 -50.634 -84.645 1.00133.02 C
ATOM 16 N7 G A 51 -7.241 -50.745 -83.365 1.00119.30 N
ATOM 17 C5 G A 51 -8.352 -51.585 -83.300 1.00111.79 C
ATOM 18 C6 G A 51 -9.106 -52.083 -82.189 1.00 93.51 C
ATOM 19 O6 G A 51 -8.955 -51.884 -80.972 1.00 81.01 O
ATOM 20 N1 G A 51 -10.150 -52.907 -82.604 1.00 94.58 N
ATOM 21 C2 G A 51 -10.442 -53.216 -83.911 1.00106.91 C
ATOM 22 N2 G A 51 -11.493 -54.028 -84.104 1.00105.37 N
ATOM 23 N3 G A 51 -9.753 -52.764 -84.950 1.00118.23 N
ATOM 24 C4 G A 51 -8.732 -51.962 -84.574 1.00121.06 C
ATOM 25 P A A 52 -9.890 -47.540 -88.743 1.00185.72 P
ATOM 26 OP1 A A 52 -9.283 -46.809 -87.603 1.00150.57 O
ATOM 27 OP2 A A 52 -10.141 -46.808 -90.005 1.00139.23 O
ATOM 28 O5' A A 52 -11.221 -48.272 -88.267 1.00186.68 O
TER
ATOM 1 O3' U B 3 -16.850 -56.459 -75.541 1.00163.00 O
ATOM 2 P C B 4 -15.809 -57.675 -75.705 1.00162.42 P
ATOM 3 OP1 C B 4 -14.563 -57.280 -75.004 1.00145.97 O
ATOM 4 OP2 C B 4 -16.507 -58.910 -75.272 1.00152.63 O
ATOM 5 O5' C B 4 -15.558 -57.715 -77.280 1.00159.10 O
ATOM 6 C5' C B 4 -16.604 -58.071 -78.173 1.00162.05 C
ATOM 7 C4' C B 4 -16.263 -57.731 -79.604 1.00161.53 C
ATOM 8 O4' C B 4 -15.958 -56.317 -79.719 1.00158.33 O
ATOM 9 C3' C B 4 -15.038 -58.414 -80.188 1.00156.86 C
ATOM 10 O3' C B 4 -15.283 -59.748 -80.597 1.00160.42 O
ATOM 11 C2' C B 4 -14.662 -57.483 -81.332 1.00156.58 C
ATOM 12 O2' C B 4 -15.519 -57.682 -82.446 1.00164.32 O
ATOM 13 C1' C B 4 -14.976 -56.120 -80.718 1.00155.60 C
ATOM 14 N1 C B 4 -13.785 -55.517 -80.094 1.00134.76 N
ATOM 15 C2 C B 4 -12.897 -54.816 -80.913 1.00133.62 C
ATOM 16 O2 C B 4 -13.153 -54.726 -82.122 1.00137.10 O
ATOM 17 N3 C B 4 -11.791 -54.261 -80.364 1.00130.50 N
ATOM 18 C4 C B 4 -11.563 -54.393 -79.054 1.00129.14 C
ATOM 19 N4 C B 4 -10.462 -53.832 -78.549 1.00129.28 N
ATOM 20 C5 C B 4 -12.453 -55.108 -78.198 1.00129.59 C
ATOM 21 C6 C B 4 -13.543 -55.652 -78.755 1.00131.78 C
ATOM 22 P U B 5 -14.056 -60.763 -80.824 1.00152.78 P
ATOM 23 OP1 U B 5 -13.065 -60.500 -79.749 1.00130.17 O
ATOM 24 OP2 U B 5 -14.633 -62.124 -80.944 1.00126.78 O
ATOM 25 O5' U B 5 -13.468 -60.298 -82.229 1.00150.63 O
TER
ATOM 2 P G A 51 -3.775 -48.200 -87.336 1.00129.19 P
ATOM 3 OP1 G A 51 -3.360 -47.298 -88.435 1.00115.28 O
ATOM 4 OP2 G A 51 -3.525 -47.777 -85.937 1.00128.39 O
ATOM 5 O5' G A 51 -5.306 -48.618 -87.512 1.00127.08 O
ATOM 6 C5' G A 51 -5.762 -49.203 -88.724 1.00121.15 C
ATOM 7 C4' G A 51 -6.952 -50.115 -88.514 1.00119.83 C
ATOM 8 O4' G A 51 -6.682 -51.079 -87.467 1.00127.90 O
ATOM 9 C3' G A 51 -8.244 -49.462 -88.059 1.00128.21 C
ATOM 10 O3' G A 51 -8.914 -48.767 -89.095 1.00127.30 O
ATOM 11 C2' G A 51 -9.027 -50.655 -87.516 1.00130.92 C
ATOM 12 O2' G A 51 -9.610 -51.399 -88.576 1.00122.80 O
ATOM 13 C1' G A 51 -7.909 -51.499 -86.898 1.00134.96 C
ATOM 14 N9 G A 51 -7.849 -51.350 -85.432 1.00129.77 N
ATOM 15 C8 G A 51 -6.978 -50.634 -84.645 1.00133.02 C
ATOM 16 N7 G A 51 -7.241 -50.745 -83.365 1.00119.30 N
ATOM 17 C5 G A 51 -8.352 -51.585 -83.300 1.00111.79 C
ATOM 18 C6 G A 51 -9.106 -52.083 -82.189 1.00 93.51 C
ATOM 19 O6 G A 51 -8.955 -51.884 -80.972 1.00 81.01 O
ATOM 20 N1 G A 51 -10.150 -52.907 -82.604 1.00 94.58 N
ATOM 21 C2 G A 51 -10.442 -53.216 -83.911 1.00106.91 C
ATOM 22 N2 G A 51 -11.493 -54.028 -84.104 1.00105.37 N
ATOM 23 N3 G A 51 -9.753 -52.764 -84.950 1.00118.23 N
ATOM 24 C4 G A 51 -8.732 -51.962 -84.574 1.00121.06 C
ATOM 25 P A A 52 -9.890 -47.540 -88.743 1.00185.72 P
ATOM 26 OP1 A A 52 -9.283 -46.809 -87.603 1.00150.57 O
ATOM 27 OP2 A A 52 -10.141 -46.808 -90.005 1.00139.23 O
ATOM 28 O5' A A 52 -11.221 -48.272 -88.267 1.00186.68 O
TER
ATOM 1 O3' U B 3 -16.850 -56.459 -75.541 1.00163.00 O
ATOM 2 P C B 4 -15.809 -57.675 -75.705 1.00162.42 P
ATOM 3 OP1 C B 4 -14.563 -57.280 -75.004 1.00145.97 O
ATOM 4 OP2 C B 4 -16.507 -58.910 -75.272 1.00152.63 O
ATOM 5 O5' C B 4 -15.558 -57.715 -77.280 1.00159.10 O
ATOM 6 C5' C B 4 -16.604 -58.071 -78.173 1.00162.05 C
ATOM 7 C4' C B 4 -16.263 -57.731 -79.604 1.00161.53 C
ATOM 8 O4' C B 4 -15.958 -56.317 -79.719 1.00158.33 O
ATOM 9 C3' C B 4 -15.038 -58.414 -80.188 1.00156.86 C
ATOM 10 O3' C B 4 -15.283 -59.748 -80.597 1.00160.42 O
ATOM 11 C2' C B 4 -14.662 -57.483 -81.332 1.00156.58 C
ATOM 12 O2' C B 4 -15.519 -57.682 -82.446 1.00164.32 O
ATOM 13 C1' C B 4 -14.976 -56.120 -80.718 1.00155.60 C
ATOM 14 N1 C B 4 -13.785 -55.517 -80.094 1.00134.76 N
ATOM 15 C2 C B 4 -12.897 -54.816 -80.913 1.00133.62 C
ATOM 16 O2 C B 4 -13.153 -54.726 -82.122 1.00137.10 O
ATOM 17 N3 C B 4 -11.791 -54.261 -80.364 1.00130.50 N
ATOM 18 C4 C B 4 -11.563 -54.393 -79.054 1.00129.14 C
ATOM 19 N4 C B 4 -10.462 -53.832 -78.549 1.00129.28 N
ATOM 20 C5 C B 4 -12.453 -55.108 -78.198 1.00129.59 C
ATOM 21 C6 C B 4 -13.543 -55.652 -78.755 1.00131.78 C
ATOM 22 P U B 5 -14.056 -60.763 -80.824 1.00152.78 P
ATOM 23 OP1 U B 5 -13.065 -60.500 -79.749 1.00130.17 O
ATOM 24 OP2 U B 5 -14.633 -62.124 -80.944 1.00126.78 O
ATOM 25 O5' U B 5 -13.468 -60.298 -82.229 1.00150.63 O
TER
Atoms:
OP1: (-3.360,-47.298,-88.435)
OP2: (-3.525,-47.777,-85.937)
C3': (-8.244,-49.462,-88.059)
C1': (-7.909,-51.499,-86.898)
C5': (-5.762,-49.203,-88.724)
O6: (-8.955,-51.884,-80.972)
O4': (-6.682,-51.079,-87.467)
C8: (-6.978,-50.634,-84.645)
C2: (-10.442,-53.216,-83.911)
C6: (-9.106,-52.083,-82.189)
C5: (-8.352,-51.585,-83.300)
C4: (-8.732,-51.962,-84.574)
P: (-3.775,-48.200,-87.336)
C4': (-6.952,-50.115,-88.514)
C2': (-9.027,-50.655,-87.516)
O2': (-9.610,-51.399,-88.576)
N1: (-10.150,-52.907,-82.604)
N2: (-11.493,-54.028,-84.104)
N3: (-9.753,-52.764,-84.950)
N7: (-7.241,-50.745,-83.365)
N9: (-7.849,-51.350,-85.432)
O5': (-5.306,-48.618,-87.512)
O3': (-8.914,-48.767,-89.095)
OP2: (-3.525,-47.777,-85.937)
C3': (-8.244,-49.462,-88.059)
C1': (-7.909,-51.499,-86.898)
C5': (-5.762,-49.203,-88.724)
O6: (-8.955,-51.884,-80.972)
O4': (-6.682,-51.079,-87.467)
C8: (-6.978,-50.634,-84.645)
C2: (-10.442,-53.216,-83.911)
C6: (-9.106,-52.083,-82.189)
C5: (-8.352,-51.585,-83.300)
C4: (-8.732,-51.962,-84.574)
P: (-3.775,-48.200,-87.336)
C4': (-6.952,-50.115,-88.514)
C2': (-9.027,-50.655,-87.516)
O2': (-9.610,-51.399,-88.576)
N1: (-10.150,-52.907,-82.604)
N2: (-11.493,-54.028,-84.104)
N3: (-9.753,-52.764,-84.950)
N7: (-7.241,-50.745,-83.365)
N9: (-7.849,-51.350,-85.432)
O5': (-5.306,-48.618,-87.512)
O3': (-8.914,-48.767,-89.095)
C2: (-12.897,-54.816,-80.913)
OP1: (-14.563,-57.280,-75.004)
OP2: (-16.507,-58.910,-75.272)
C4: (-11.563,-54.393,-79.054)
O5': (-15.558,-57.715,-77.280)
C3': (-15.038,-58.414,-80.188)
C1': (-14.976,-56.120,-80.718)
O4': (-15.958,-56.317,-79.719)
C5': (-16.604,-58.071,-78.173)
P: (-15.809,-57.675,-75.705)
O2: (-13.153,-54.726,-82.122)
C4': (-16.263,-57.731,-79.604)
C2': (-14.662,-57.483,-81.332)
O2': (-15.519,-57.682,-82.446)
N1: (-13.785,-55.517,-80.094)
N3: (-11.791,-54.261,-80.364)
N4: (-10.462,-53.832,-78.549)
C6: (-13.543,-55.652,-78.755)
C5: (-12.453,-55.108,-78.198)
O3': (-15.283,-59.748,-80.597)
OP1: (-14.563,-57.280,-75.004)
OP2: (-16.507,-58.910,-75.272)
C4: (-11.563,-54.393,-79.054)
O5': (-15.558,-57.715,-77.280)
C3': (-15.038,-58.414,-80.188)
C1': (-14.976,-56.120,-80.718)
O4': (-15.958,-56.317,-79.719)
C5': (-16.604,-58.071,-78.173)
P: (-15.809,-57.675,-75.705)
O2: (-13.153,-54.726,-82.122)
C4': (-16.263,-57.731,-79.604)
C2': (-14.662,-57.483,-81.332)
O2': (-15.519,-57.682,-82.446)
N1: (-13.785,-55.517,-80.094)
N3: (-11.791,-54.261,-80.364)
N4: (-10.462,-53.832,-78.549)
C6: (-13.543,-55.652,-78.755)
C5: (-12.453,-55.108,-78.198)
O3': (-15.283,-59.748,-80.597)
Image (generated by PyMOL):