ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUW:C4:D47

Extra

PDB:
ATOM 1 O3' A A 3 -1.461 -31.009 -2.614 1.00 73.35 O
ATOM 2 P G A 4 -1.412 -31.977 -1.359 1.00 73.39 P
ATOM 3 OP1 G A 4 -2.775 -32.016 -0.792 1.00 73.79 O
ATOM 4 OP2 G A 4 -0.297 -31.622 -0.455 1.00 74.65 O
ATOM 5 O5' G A 4 -1.101 -33.358 -2.095 1.00 74.40 O
ATOM 6 C5' G A 4 -2.167 -34.062 -2.718 1.00 72.77 C
ATOM 7 C4' G A 4 -1.660 -35.292 -3.437 1.00 71.86 C
ATOM 8 O4' G A 4 -0.588 -34.953 -4.350 1.00 72.57 O
ATOM 9 C3' G A 4 -1.021 -36.341 -2.558 1.00 72.06 C
ATOM 10 O3' G A 4 -2.017 -37.086 -1.860 1.00 71.97 O
ATOM 11 C2' G A 4 -0.286 -37.152 -3.620 1.00 71.67 C
ATOM 12 O2' G A 4 -1.201 -37.907 -4.394 1.00 72.07 O
ATOM 13 C1' G A 4 0.328 -36.036 -4.462 1.00 70.95 C
ATOM 14 N9 G A 4 1.652 -35.513 -4.072 1.00 70.74 N
ATOM 15 C8 G A 4 1.877 -34.283 -3.498 1.00 70.04 C
ATOM 16 N7 G A 4 3.132 -34.018 -3.265 1.00 69.92 N
ATOM 17 C5 G A 4 3.807 -35.146 -3.713 1.00 70.03 C
ATOM 18 C6 G A 4 5.203 -35.436 -3.698 1.00 70.40 C
ATOM 19 O6 G A 4 6.138 -34.737 -3.284 1.00 69.93 O
ATOM 20 N1 G A 4 5.485 -36.691 -4.233 1.00 69.85 N
ATOM 21 C2 G A 4 4.522 -37.536 -4.723 1.00 70.01 C
ATOM 22 N2 G A 4 4.988 -38.693 -5.186 1.00 70.28 N
ATOM 23 N3 G A 4 3.208 -37.284 -4.743 1.00 69.58 N
ATOM 24 C4 G A 4 2.911 -36.076 -4.216 1.00 69.69 C
ATOM 25 P C A 5 -1.832 -37.416 -0.304 1.00 71.88 P
ATOM 26 OP1 C A 5 -3.140 -37.849 0.223 1.00 70.92 O
ATOM 27 OP2 C A 5 -1.097 -36.300 0.332 1.00 70.87 O
ATOM 28 O5' C A 5 -0.825 -38.663 -0.347 1.00 72.93 O
TER

ATOM 1 O3' G B 46 15.204 -39.181 -4.600 1.00 73.61 O
ATOM 2 P C B 47 14.845 -38.556 -6.030 1.00 73.16 P
ATOM 3 OP1 C B 47 15.864 -39.028 -6.992 1.00 75.46 O
ATOM 4 OP2 C B 47 14.605 -37.117 -5.828 1.00 73.69 O
ATOM 5 O5' C B 47 13.460 -39.223 -6.452 1.00 73.67 O
ATOM 6 C5' C B 47 13.392 -40.603 -6.814 1.00 72.03 C
ATOM 7 C4' C B 47 11.967 -41.109 -6.683 1.00 70.92 C
ATOM 8 O4' C B 47 11.432 -40.760 -5.383 1.00 70.25 O
ATOM 9 C3' C B 47 10.956 -40.466 -7.614 1.00 70.61 C
ATOM 10 O3' C B 47 11.029 -41.014 -8.899 1.00 71.36 O
ATOM 11 C2' C B 47 9.646 -40.787 -6.913 1.00 69.23 C
ATOM 12 O2' C B 47 9.267 -42.147 -6.961 1.00 66.69 O
ATOM 13 C1' C B 47 10.061 -40.412 -5.499 1.00 68.25 C
ATOM 14 N1 C B 47 9.798 -38.964 -5.095 1.00 67.19 N
ATOM 15 C2 C B 47 8.475 -38.553 -4.893 1.00 66.82 C
ATOM 16 O2 C B 47 7.555 -39.352 -5.062 1.00 65.90 O
ATOM 17 N3 C B 47 8.224 -37.274 -4.520 1.00 67.16 N
ATOM 18 C4 C B 47 9.217 -36.410 -4.342 1.00 67.32 C
ATOM 19 N4 C B 47 8.867 -35.172 -3.977 1.00 66.64 N
ATOM 20 C5 C B 47 10.578 -36.795 -4.535 1.00 66.14 C
ATOM 21 C6 C B 47 10.811 -38.060 -4.906 1.00 66.70 C
ATOM 22 P U B 48 11.214 -40.026 -10.135 1.00 70.26 P
ATOM 23 OP1 U B 48 11.576 -40.885 -11.286 1.00 72.45 O
ATOM 24 OP2 U B 48 12.100 -38.912 -9.741 1.00 70.91 O
ATOM 25 O5' U B 48 9.741 -39.481 -10.359 1.00 70.16 O
TER

Atoms:
OP1: (-2.775,-32.016,-0.792)
OP2: (-0.297,-31.622,-0.455)
C3': (-1.021,-36.341,-2.558)
C1': (0.328,-36.036,-4.462)
C5': (-2.167,-34.062,-2.718)
O6: (6.138,-34.737,-3.284)
O4': (-0.588,-34.953,-4.350)
C8: (1.877,-34.283,-3.498)
C2: (4.522,-37.536,-4.723)
C6: (5.203,-35.436,-3.698)
C5: (3.807,-35.146,-3.713)
C4: (2.911,-36.076,-4.216)
P: (-1.412,-31.977,-1.359)
C4': (-1.660,-35.292,-3.437)
C2': (-0.286,-37.152,-3.620)
O2': (-1.201,-37.907,-4.394)
N1: (5.485,-36.691,-4.233)
N2: (4.988,-38.693,-5.186)
N3: (3.208,-37.284,-4.743)
N7: (3.132,-34.018,-3.265)
N9: (1.652,-35.513,-4.072)
O5': (-1.101,-33.358,-2.095)
O3': (-2.017,-37.086,-1.860)
C2: (8.475,-38.553,-4.893)
OP1: (15.864,-39.028,-6.992)
OP2: (14.605,-37.117,-5.828)
C4: (9.217,-36.410,-4.342)
O5': (13.460,-39.223,-6.452)
C3': (10.956,-40.466,-7.614)
C1': (10.061,-40.412,-5.499)
O4': (11.432,-40.760,-5.383)
C5': (13.392,-40.603,-6.814)
P: (14.845,-38.556,-6.030)
O2: (7.555,-39.352,-5.062)
C4': (11.967,-41.109,-6.683)
C2': (9.646,-40.787,-6.913)
O2': (9.267,-42.147,-6.961)
N1: (9.798,-38.964,-5.095)
N3: (8.224,-37.274,-4.520)
N4: (8.867,-35.172,-3.977)
C6: (10.811,-38.060,-4.906)
C5: (10.578,-36.795,-4.535)
O3': (11.029,-41.014,-8.899)
Image (generated by PyMOL):
PyMOL image
show in jmol