Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:02080:02087
Extra
PDB:
ATOM 1 O3' U A2079 113.604 106.351 32.290 1.00 73.27 O
ATOM 2 P G A2080 113.867 105.648 30.865 1.00 77.36 P
ATOM 3 OP1 G A2080 112.857 106.174 29.902 1.00 74.60 O
ATOM 4 OP2 G A2080 113.951 104.182 31.108 1.00 76.68 O
ATOM 5 O5' G A2080 115.325 106.169 30.457 1.00 79.46 O
ATOM 6 C5' G A2080 115.514 106.974 29.279 1.00 83.63 C
ATOM 7 C4' G A2080 116.858 107.688 29.288 1.00 86.47 C
ATOM 8 O4' G A2080 116.950 108.653 30.373 1.00 85.78 O
ATOM 9 C3' G A2080 118.151 106.906 29.458 1.00 87.82 C
ATOM 10 O3' G A2080 118.516 106.142 28.311 1.00 91.72 O
ATOM 11 C2' G A2080 119.132 108.055 29.663 1.00 86.95 C
ATOM 12 O2' G A2080 119.421 108.738 28.457 1.00 85.55 O
ATOM 13 C1' G A2080 118.322 108.984 30.573 1.00 86.07 C
ATOM 14 N9 G A2080 118.688 108.748 31.966 1.00 85.43 N
ATOM 15 C8 G A2080 117.957 108.106 32.937 1.00 85.65 C
ATOM 16 N7 G A2080 118.599 107.989 34.067 1.00 86.10 N
ATOM 17 C5 G A2080 119.823 108.604 33.834 1.00 85.25 C
ATOM 18 C6 G A2080 120.952 108.770 34.685 1.00 85.45 C
ATOM 19 O6 G A2080 121.108 108.384 35.852 1.00 85.57 O
ATOM 20 N1 G A2080 121.976 109.457 34.045 1.00 85.54 N
ATOM 21 C2 G A2080 121.933 109.914 32.755 1.00 85.49 C
ATOM 22 N2 G A2080 123.030 110.549 32.321 1.00 85.57 N
ATOM 23 N3 G A2080 120.894 109.759 31.949 1.00 85.10 N
ATOM 24 C4 G A2080 119.883 109.098 32.550 1.00 85.04 C
ATOM 25 P A A2081 119.507 104.879 28.469 1.00 93.58 P
ATOM 26 OP1 A A2081 119.284 104.032 27.273 1.00 93.08 O
ATOM 27 OP2 A A2081 119.350 104.290 29.823 1.00 93.14 O
ATOM 28 O5' A A2081 120.970 105.507 28.388 1.00 96.42 O
TER
ATOM 1 O3' U B2086 132.286 110.035 37.864 1.00120.78 O
ATOM 2 P C B2087 131.606 111.493 37.923 1.00119.39 P
ATOM 3 OP1 C B2087 132.702 112.493 37.828 1.00119.01 O
ATOM 4 OP2 C B2087 130.695 111.520 39.096 1.00120.04 O
ATOM 5 O5' C B2087 130.733 111.591 36.589 1.00117.17 O
ATOM 6 C5' C B2087 131.366 111.609 35.291 1.00113.72 C
ATOM 7 C4' C B2087 130.336 111.498 34.184 1.00111.23 C
ATOM 8 O4' C B2087 129.496 110.340 34.422 1.00110.77 O
ATOM 9 C3' C B2087 129.341 112.641 34.014 1.00109.34 C
ATOM 10 O3' C B2087 129.935 113.708 33.259 1.00106.68 O
ATOM 11 C2' C B2087 128.209 111.967 33.237 1.00110.05 C
ATOM 12 O2' C B2087 128.464 111.881 31.849 1.00108.37 O
ATOM 13 C1' C B2087 128.228 110.548 33.820 1.00111.01 C
ATOM 14 N1 C B2087 127.165 110.215 34.795 1.00112.16 N
ATOM 15 C2 C B2087 125.911 109.780 34.317 1.00111.80 C
ATOM 16 O2 C B2087 125.715 109.714 33.092 1.00110.74 O
ATOM 17 N3 C B2087 124.946 109.444 35.207 1.00112.20 N
ATOM 18 C4 C B2087 125.186 109.531 36.519 1.00112.55 C
ATOM 19 N4 C B2087 124.210 109.179 37.360 1.00111.76 N
ATOM 20 C5 C B2087 126.440 109.981 37.030 1.00113.05 C
ATOM 21 C6 C B2087 127.389 110.312 36.142 1.00112.87 C
ATOM 22 P U B2088 129.272 115.179 33.262 1.00103.88 P
ATOM 23 OP1 U B2088 130.153 116.102 32.503 1.00104.10 O
ATOM 24 OP2 U B2088 128.905 115.511 34.662 1.00104.52 O
ATOM 25 O5' U B2088 127.945 115.006 32.399 1.00101.79 O
TER
ATOM 2 P G A2080 113.867 105.648 30.865 1.00 77.36 P
ATOM 3 OP1 G A2080 112.857 106.174 29.902 1.00 74.60 O
ATOM 4 OP2 G A2080 113.951 104.182 31.108 1.00 76.68 O
ATOM 5 O5' G A2080 115.325 106.169 30.457 1.00 79.46 O
ATOM 6 C5' G A2080 115.514 106.974 29.279 1.00 83.63 C
ATOM 7 C4' G A2080 116.858 107.688 29.288 1.00 86.47 C
ATOM 8 O4' G A2080 116.950 108.653 30.373 1.00 85.78 O
ATOM 9 C3' G A2080 118.151 106.906 29.458 1.00 87.82 C
ATOM 10 O3' G A2080 118.516 106.142 28.311 1.00 91.72 O
ATOM 11 C2' G A2080 119.132 108.055 29.663 1.00 86.95 C
ATOM 12 O2' G A2080 119.421 108.738 28.457 1.00 85.55 O
ATOM 13 C1' G A2080 118.322 108.984 30.573 1.00 86.07 C
ATOM 14 N9 G A2080 118.688 108.748 31.966 1.00 85.43 N
ATOM 15 C8 G A2080 117.957 108.106 32.937 1.00 85.65 C
ATOM 16 N7 G A2080 118.599 107.989 34.067 1.00 86.10 N
ATOM 17 C5 G A2080 119.823 108.604 33.834 1.00 85.25 C
ATOM 18 C6 G A2080 120.952 108.770 34.685 1.00 85.45 C
ATOM 19 O6 G A2080 121.108 108.384 35.852 1.00 85.57 O
ATOM 20 N1 G A2080 121.976 109.457 34.045 1.00 85.54 N
ATOM 21 C2 G A2080 121.933 109.914 32.755 1.00 85.49 C
ATOM 22 N2 G A2080 123.030 110.549 32.321 1.00 85.57 N
ATOM 23 N3 G A2080 120.894 109.759 31.949 1.00 85.10 N
ATOM 24 C4 G A2080 119.883 109.098 32.550 1.00 85.04 C
ATOM 25 P A A2081 119.507 104.879 28.469 1.00 93.58 P
ATOM 26 OP1 A A2081 119.284 104.032 27.273 1.00 93.08 O
ATOM 27 OP2 A A2081 119.350 104.290 29.823 1.00 93.14 O
ATOM 28 O5' A A2081 120.970 105.507 28.388 1.00 96.42 O
TER
ATOM 1 O3' U B2086 132.286 110.035 37.864 1.00120.78 O
ATOM 2 P C B2087 131.606 111.493 37.923 1.00119.39 P
ATOM 3 OP1 C B2087 132.702 112.493 37.828 1.00119.01 O
ATOM 4 OP2 C B2087 130.695 111.520 39.096 1.00120.04 O
ATOM 5 O5' C B2087 130.733 111.591 36.589 1.00117.17 O
ATOM 6 C5' C B2087 131.366 111.609 35.291 1.00113.72 C
ATOM 7 C4' C B2087 130.336 111.498 34.184 1.00111.23 C
ATOM 8 O4' C B2087 129.496 110.340 34.422 1.00110.77 O
ATOM 9 C3' C B2087 129.341 112.641 34.014 1.00109.34 C
ATOM 10 O3' C B2087 129.935 113.708 33.259 1.00106.68 O
ATOM 11 C2' C B2087 128.209 111.967 33.237 1.00110.05 C
ATOM 12 O2' C B2087 128.464 111.881 31.849 1.00108.37 O
ATOM 13 C1' C B2087 128.228 110.548 33.820 1.00111.01 C
ATOM 14 N1 C B2087 127.165 110.215 34.795 1.00112.16 N
ATOM 15 C2 C B2087 125.911 109.780 34.317 1.00111.80 C
ATOM 16 O2 C B2087 125.715 109.714 33.092 1.00110.74 O
ATOM 17 N3 C B2087 124.946 109.444 35.207 1.00112.20 N
ATOM 18 C4 C B2087 125.186 109.531 36.519 1.00112.55 C
ATOM 19 N4 C B2087 124.210 109.179 37.360 1.00111.76 N
ATOM 20 C5 C B2087 126.440 109.981 37.030 1.00113.05 C
ATOM 21 C6 C B2087 127.389 110.312 36.142 1.00112.87 C
ATOM 22 P U B2088 129.272 115.179 33.262 1.00103.88 P
ATOM 23 OP1 U B2088 130.153 116.102 32.503 1.00104.10 O
ATOM 24 OP2 U B2088 128.905 115.511 34.662 1.00104.52 O
ATOM 25 O5' U B2088 127.945 115.006 32.399 1.00101.79 O
TER
Atoms:
OP1: (112.857,106.174,29.902)
OP2: (113.951,104.182,31.108)
C3': (118.151,106.906,29.458)
C1': (118.322,108.984,30.573)
C5': (115.514,106.974,29.279)
O6: (121.108,108.384,35.852)
O4': (116.950,108.653,30.373)
C8: (117.957,108.106,32.937)
C2: (121.933,109.914,32.755)
C6: (120.952,108.770,34.685)
C5: (119.823,108.604,33.834)
C4: (119.883,109.098,32.550)
P: (113.867,105.648,30.865)
C4': (116.858,107.688,29.288)
C2': (119.132,108.055,29.663)
O2': (119.421,108.738,28.457)
N1: (121.976,109.457,34.045)
N2: (123.030,110.549,32.321)
N3: (120.894,109.759,31.949)
N7: (118.599,107.989,34.067)
N9: (118.688,108.748,31.966)
O5': (115.325,106.169,30.457)
O3': (118.516,106.142,28.311)
OP2: (113.951,104.182,31.108)
C3': (118.151,106.906,29.458)
C1': (118.322,108.984,30.573)
C5': (115.514,106.974,29.279)
O6: (121.108,108.384,35.852)
O4': (116.950,108.653,30.373)
C8: (117.957,108.106,32.937)
C2: (121.933,109.914,32.755)
C6: (120.952,108.770,34.685)
C5: (119.823,108.604,33.834)
C4: (119.883,109.098,32.550)
P: (113.867,105.648,30.865)
C4': (116.858,107.688,29.288)
C2': (119.132,108.055,29.663)
O2': (119.421,108.738,28.457)
N1: (121.976,109.457,34.045)
N2: (123.030,110.549,32.321)
N3: (120.894,109.759,31.949)
N7: (118.599,107.989,34.067)
N9: (118.688,108.748,31.966)
O5': (115.325,106.169,30.457)
O3': (118.516,106.142,28.311)
C2: (125.911,109.780,34.317)
OP1: (132.702,112.493,37.828)
OP2: (130.695,111.520,39.096)
C4: (125.186,109.531,36.519)
O5': (130.733,111.591,36.589)
C3': (129.341,112.641,34.014)
C1': (128.228,110.548,33.820)
O4': (129.496,110.340,34.422)
C5': (131.366,111.609,35.291)
P: (131.606,111.493,37.923)
O2: (125.715,109.714,33.092)
C4': (130.336,111.498,34.184)
C2': (128.209,111.967,33.237)
O2': (128.464,111.881,31.849)
N1: (127.165,110.215,34.795)
N3: (124.946,109.444,35.207)
N4: (124.210,109.179,37.360)
C6: (127.389,110.312,36.142)
C5: (126.440,109.981,37.030)
O3': (129.935,113.708,33.259)
OP1: (132.702,112.493,37.828)
OP2: (130.695,111.520,39.096)
C4: (125.186,109.531,36.519)
O5': (130.733,111.591,36.589)
C3': (129.341,112.641,34.014)
C1': (128.228,110.548,33.820)
O4': (129.496,110.340,34.422)
C5': (131.366,111.609,35.291)
P: (131.606,111.493,37.923)
O2: (125.715,109.714,33.092)
C4': (130.336,111.498,34.184)
C2': (128.209,111.967,33.237)
O2': (128.464,111.881,31.849)
N1: (127.165,110.215,34.795)
N3: (124.946,109.444,35.207)
N4: (124.210,109.179,37.360)
C6: (127.389,110.312,36.142)
C5: (126.440,109.981,37.030)
O3': (129.935,113.708,33.259)
Image (generated by PyMOL):