ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M90:A549:A584

Extra

PDB:
ATOM 1 O3' C A 548 -17.161 108.285 102.983 1.00 75.59 O
ATOM 2 P G A 549 -16.395 106.878 102.833 1.00 76.20 P
ATOM 3 OP1 G A 549 -16.919 105.934 103.859 1.00 76.63 O
ATOM 4 OP2 G A 549 -14.933 107.147 102.767 1.00 76.52 O
ATOM 5 O5' G A 549 -16.839 106.353 101.399 1.00 72.62 O
ATOM 6 C5' G A 549 -18.211 106.063 101.120 1.00 68.89 C
ATOM 7 C4' G A 549 -18.387 105.746 99.659 1.00 66.55 C
ATOM 8 O4' G A 549 -18.035 106.915 98.872 1.00 67.00 O
ATOM 9 C3' G A 549 -17.487 104.650 99.119 1.00 64.86 C
ATOM 10 O3' G A 549 -18.014 103.355 99.371 1.00 62.34 O
ATOM 11 C2' G A 549 -17.447 104.972 97.633 1.00 66.26 C
ATOM 12 O2' G A 549 -18.600 104.524 96.947 1.00 65.50 O
ATOM 13 C1' G A 549 -17.415 106.506 97.660 1.00 67.74 C
ATOM 14 N9 G A 549 -16.057 107.053 97.619 1.00 69.12 N
ATOM 15 C8 G A 549 -15.418 107.758 98.612 1.00 69.49 C
ATOM 16 N7 G A 549 -14.195 108.090 98.300 1.00 70.64 N
ATOM 17 C5 G A 549 -14.012 107.581 97.020 1.00 70.33 C
ATOM 18 C6 G A 549 -12.875 107.623 96.164 1.00 70.30 C
ATOM 19 O6 G A 549 -11.767 108.133 96.376 1.00 70.64 O
ATOM 20 N1 G A 549 -13.122 106.982 94.955 1.00 70.64 N
ATOM 21 C2 G A 549 -14.307 106.379 94.607 1.00 70.29 C
ATOM 22 N2 G A 549 -14.353 105.818 93.390 1.00 69.25 N
ATOM 23 N3 G A 549 -15.370 106.328 95.394 1.00 70.32 N
ATOM 24 C4 G A 549 -15.154 106.945 96.579 1.00 69.96 C
ATOM 25 P A A 550 -17.045 102.073 99.308 1.00 61.59 P
ATOM 26 OP1 A A 550 -17.847 100.868 99.654 1.00 60.32 O
ATOM 27 OP2 A A 550 -15.824 102.389 100.091 1.00 59.89 O
ATOM 28 O5' A A 550 -16.667 101.955 97.766 1.00 59.95 O
TER

ATOM 1 O3' U B 583 -5.957 107.516 87.539 1.00 49.20 O
ATOM 2 P C B 584 -6.874 108.819 87.700 1.00 49.62 P
ATOM 3 OP1 C B 584 -6.713 109.619 86.467 1.00 51.65 O
ATOM 4 OP2 C B 584 -6.613 109.446 89.016 1.00 48.94 O
ATOM 5 O5' C B 584 -8.348 108.225 87.723 1.00 52.27 O
ATOM 6 C5' C B 584 -8.831 107.429 86.632 1.00 53.33 C
ATOM 7 C4' C B 584 -10.137 106.777 87.006 1.00 55.11 C
ATOM 8 O4' C B 584 -9.929 105.979 88.202 1.00 55.03 O
ATOM 9 C3' C B 584 -11.279 107.710 87.386 1.00 54.82 C
ATOM 10 O3' C B 584 -11.962 108.217 86.245 1.00 54.21 O
ATOM 11 C2' C B 584 -12.156 106.794 88.227 1.00 55.57 C
ATOM 12 O2' C B 584 -12.884 105.874 87.438 1.00 54.31 O
ATOM 13 C1' C B 584 -11.098 106.011 89.005 1.00 55.71 C
ATOM 14 N1 C B 584 -10.760 106.608 90.313 1.00 55.80 N
ATOM 15 C2 C B 584 -11.620 106.394 91.391 1.00 56.26 C
ATOM 16 O2 C B 584 -12.647 105.724 91.219 1.00 57.26 O
ATOM 17 N3 C B 584 -11.316 106.921 92.596 1.00 56.84 N
ATOM 18 C4 C B 584 -10.206 107.640 92.749 1.00 57.27 C
ATOM 19 N4 C B 584 -9.950 108.137 93.959 1.00 58.18 N
ATOM 20 C5 C B 584 -9.311 107.880 91.669 1.00 57.32 C
ATOM 21 C6 C B 584 -9.625 107.353 90.477 1.00 56.65 C
ATOM 22 P A B 585 -12.765 109.607 86.347 1.00 55.73 P
ATOM 23 OP1 A B 585 -13.171 109.949 84.968 1.00 56.98 O
ATOM 24 OP2 A B 585 -12.012 110.599 87.148 1.00 55.59 O
ATOM 25 O5' A B 585 -14.066 109.232 87.180 1.00 58.49 O
TER

Atoms:
OP1: (-16.919,105.934,103.859)
OP2: (-14.933,107.147,102.767)
C3': (-17.487,104.650,99.119)
C1': (-17.415,106.506,97.660)
C5': (-18.211,106.063,101.120)
O6: (-11.767,108.133,96.376)
O4': (-18.035,106.915,98.872)
C8: (-15.418,107.758,98.612)
C2: (-14.307,106.379,94.607)
C6: (-12.875,107.623,96.164)
C5: (-14.012,107.581,97.020)
C4: (-15.154,106.945,96.579)
P: (-16.395,106.878,102.833)
C4': (-18.387,105.746,99.659)
C2': (-17.447,104.972,97.633)
O2': (-18.600,104.524,96.947)
N1: (-13.122,106.982,94.955)
N2: (-14.353,105.818,93.390)
N3: (-15.370,106.328,95.394)
N7: (-14.195,108.090,98.300)
N9: (-16.057,107.053,97.619)
O5': (-16.839,106.353,101.399)
O3': (-18.014,103.355,99.371)
C2: (-11.620,106.394,91.391)
OP1: (-6.713,109.619,86.467)
OP2: (-6.613,109.446,89.016)
C4: (-10.206,107.640,92.749)
O5': (-8.348,108.225,87.723)
C3': (-11.279,107.710,87.386)
C1': (-11.098,106.011,89.005)
O4': (-9.929,105.979,88.202)
C5': (-8.831,107.429,86.632)
P: (-6.874,108.819,87.700)
O2: (-12.647,105.724,91.219)
C4': (-10.137,106.777,87.006)
C2': (-12.156,106.794,88.227)
O2': (-12.884,105.874,87.438)
N1: (-10.760,106.608,90.313)
N3: (-11.316,106.921,92.596)
N4: (-9.950,108.137,93.959)
C6: (-9.625,107.353,90.477)
C5: (-9.311,107.880,91.669)
O3': (-11.962,108.217,86.245)
Image (generated by PyMOL):
PyMOL image
show in jmol