ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0108:0112

Extra

PDB:
ATOM 1 O3' A A 107 88.814 151.753 36.360 1.00 44.53 O
ATOM 2 P G A 108 88.017 150.755 37.331 1.00 46.96 P
ATOM 3 OP1 G A 108 89.042 149.919 38.013 1.00 46.69 O
ATOM 4 OP2 G A 108 86.923 150.105 36.559 1.00 45.21 O
ATOM 5 O5' G A 108 87.381 151.721 38.425 1.00 42.99 O
ATOM 6 C5' G A 108 88.225 152.288 39.426 1.00 41.89 C
ATOM 7 C4' G A 108 87.584 153.492 40.054 1.00 39.73 C
ATOM 8 O4' G A 108 87.078 154.372 39.018 1.00 38.14 O
ATOM 9 C3' G A 108 86.353 153.265 40.903 1.00 38.57 C
ATOM 10 O3' G A 108 86.671 152.754 42.182 1.00 38.90 O
ATOM 11 C2' G A 108 85.802 154.678 40.986 1.00 36.84 C
ATOM 12 O2' G A 108 86.570 155.480 41.860 1.00 37.27 O
ATOM 13 C1' G A 108 86.019 155.155 39.548 1.00 34.58 C
ATOM 14 N9 G A 108 84.822 154.940 38.742 1.00 32.28 N
ATOM 15 C8 G A 108 84.631 154.029 37.729 1.00 31.30 C
ATOM 16 N7 G A 108 83.422 154.062 37.235 1.00 30.68 N
ATOM 17 C5 G A 108 82.785 155.061 37.957 1.00 30.05 C
ATOM 18 C6 G A 108 81.452 155.542 37.887 1.00 31.80 C
ATOM 19 O6 G A 108 80.537 155.184 37.134 1.00 32.14 O
ATOM 20 N1 G A 108 81.227 156.545 38.821 1.00 31.45 N
ATOM 21 C2 G A 108 82.164 157.029 39.699 1.00 29.77 C
ATOM 22 N2 G A 108 81.768 158.006 40.515 1.00 30.88 N
ATOM 23 N3 G A 108 83.398 156.593 39.771 1.00 28.98 N
ATOM 24 C4 G A 108 83.639 155.615 38.882 1.00 29.92 C
ATOM 25 P A A 109 85.592 151.852 42.956 1.00 41.30 P
ATOM 26 OP1 A A 109 86.247 151.427 44.220 1.00 42.74 O
ATOM 27 OP2 A A 109 85.066 150.825 42.013 1.00 41.93 O
ATOM 28 O5' A A 109 84.392 152.846 43.294 1.00 36.90 O
TER

ATOM 1 O3' U B 111 72.709 158.323 41.543 1.00 38.82 O
ATOM 2 P C B 112 71.805 159.619 41.845 1.00 40.72 P
ATOM 3 OP1 C B 112 70.832 159.319 42.929 1.00 41.29 O
ATOM 4 OP2 C B 112 71.306 160.124 40.538 1.00 38.77 O
ATOM 5 O5' C B 112 72.867 160.663 42.409 1.00 41.31 O
ATOM 6 C5' C B 112 73.785 161.331 41.522 1.00 40.85 C
ATOM 7 C4' C B 112 75.191 161.181 42.030 1.00 39.81 C
ATOM 8 O4' C B 112 75.564 159.777 42.002 1.00 38.37 O
ATOM 9 C3' C B 112 76.280 161.828 41.194 1.00 39.60 C
ATOM 10 O3' C B 112 76.388 163.222 41.420 1.00 42.87 O
ATOM 11 C2' C B 112 77.510 161.092 41.692 1.00 37.38 C
ATOM 12 O2' C B 112 77.894 161.528 42.978 1.00 39.27 O
ATOM 13 C1' C B 112 76.968 159.670 41.807 1.00 34.48 C
ATOM 14 N1 C B 112 77.248 158.878 40.595 1.00 30.62 N
ATOM 15 C2 C B 112 78.562 158.445 40.381 1.00 30.32 C
ATOM 16 O2 C B 112 79.437 158.777 41.190 1.00 30.68 O
ATOM 17 N3 C B 112 78.849 157.687 39.300 1.00 27.35 N
ATOM 18 C4 C B 112 77.886 157.367 38.442 1.00 28.99 C
ATOM 19 N4 C B 112 78.215 156.592 37.409 1.00 28.17 N
ATOM 20 C5 C B 112 76.539 157.819 38.612 1.00 28.06 C
ATOM 21 C6 C B 112 76.266 158.561 39.696 1.00 28.58 C
ATOM 22 P U B 113 76.778 164.195 40.198 1.00 45.58 P
ATOM 23 OP1 U B 113 76.728 165.565 40.765 1.00 42.92 O
ATOM 24 OP2 U B 113 75.929 163.857 39.020 1.00 46.44 O
ATOM 25 O5' U B 113 78.278 163.791 39.822 1.00 41.98 O
TER

Atoms:
OP1: (89.042,149.919,38.013)
OP2: (86.923,150.105,36.559)
C3': (86.353,153.265,40.903)
C1': (86.019,155.155,39.548)
C5': (88.225,152.288,39.426)
O6: (80.537,155.184,37.134)
O4': (87.078,154.372,39.018)
C8: (84.631,154.029,37.729)
C2: (82.164,157.029,39.699)
C6: (81.452,155.542,37.887)
C5: (82.785,155.061,37.957)
C4: (83.639,155.615,38.882)
P: (88.017,150.755,37.331)
C4': (87.584,153.492,40.054)
C2': (85.802,154.678,40.986)
O2': (86.570,155.480,41.860)
N1: (81.227,156.545,38.821)
N2: (81.768,158.006,40.515)
N3: (83.398,156.593,39.771)
N7: (83.422,154.062,37.235)
N9: (84.822,154.940,38.742)
O5': (87.381,151.721,38.425)
O3': (86.671,152.754,42.182)
C2: (78.562,158.445,40.381)
OP1: (70.832,159.319,42.929)
OP2: (71.306,160.124,40.538)
C4: (77.886,157.367,38.442)
O5': (72.867,160.663,42.409)
C3': (76.280,161.828,41.194)
C1': (76.968,159.670,41.807)
O4': (75.564,159.777,42.002)
C5': (73.785,161.331,41.522)
P: (71.805,159.619,41.845)
O2: (79.437,158.777,41.190)
C4': (75.191,161.181,42.030)
C2': (77.510,161.092,41.692)
O2': (77.894,161.528,42.978)
N1: (77.248,158.878,40.595)
N3: (78.849,157.687,39.300)
N4: (78.215,156.592,37.409)
C6: (76.266,158.561,39.696)
C5: (76.539,157.819,38.612)
O3': (76.388,163.222,41.420)
Image (generated by PyMOL):
PyMOL image
show in jmol