Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXB:B82:B4
Extra
PDB:
ATOM 1 O3' A A 81 -17.197 -38.177 9.052 1.00 81.81 O
ATOM 2 P G A 82 -18.123 -37.389 8.009 1.00 84.21 P
ATOM 3 OP1 G A 82 -17.539 -37.565 6.661 1.00 84.84 O
ATOM 4 OP2 G A 82 -18.362 -36.018 8.507 1.00 84.99 O
ATOM 5 O5' G A 82 -19.497 -38.204 8.092 1.00 84.72 O
ATOM 6 C5' G A 82 -19.542 -39.537 7.595 1.00 84.56 C
ATOM 7 C4' G A 82 -20.660 -40.343 8.223 1.00 84.99 C
ATOM 8 O4' G A 82 -20.505 -40.373 9.665 1.00 84.77 O
ATOM 9 C3' G A 82 -22.064 -39.793 8.036 1.00 86.17 C
ATOM 10 O3' G A 82 -22.586 -40.067 6.758 1.00 86.61 O
ATOM 11 C2' G A 82 -22.808 -40.539 9.133 1.00 86.00 C
ATOM 12 O2' G A 82 -23.064 -41.893 8.817 1.00 85.76 O
ATOM 13 C1' G A 82 -21.792 -40.417 10.266 1.00 85.29 C
ATOM 14 N9 G A 82 -22.030 -39.218 11.076 1.00 85.78 N
ATOM 15 C8 G A 82 -21.327 -38.034 11.071 1.00 86.11 C
ATOM 16 N7 G A 82 -21.790 -37.143 11.905 1.00 86.64 N
ATOM 17 C5 G A 82 -22.876 -37.776 12.503 1.00 86.64 C
ATOM 18 C6 G A 82 -23.782 -37.317 13.495 1.00 86.65 C
ATOM 19 O6 G A 82 -23.797 -36.216 14.058 1.00 87.10 O
ATOM 20 N1 G A 82 -24.746 -38.273 13.822 1.00 86.26 N
ATOM 21 C2 G A 82 -24.824 -39.526 13.259 1.00 85.76 C
ATOM 22 N2 G A 82 -25.807 -40.327 13.683 1.00 85.39 N
ATOM 23 N3 G A 82 -23.984 -39.969 12.335 1.00 85.94 N
ATOM 24 C4 G A 82 -23.038 -39.050 12.002 1.00 86.19 C
ATOM 25 P A A 83 -23.455 -38.905 6.084 1.00 89.19 P
ATOM 26 OP1 A A 83 -23.595 -39.208 4.644 1.00 90.21 O
ATOM 27 OP2 A A 83 -22.913 -37.593 6.503 1.00 89.40 O
ATOM 28 O5' A A 83 -24.880 -39.077 6.782 1.00 89.99 O
TER
ATOM 1 O3' U B 3 -31.458 -35.292 20.916 1.00 91.65 O
ATOM 2 P C B 4 -30.271 -36.014 21.706 1.00 90.12 P
ATOM 3 OP1 C B 4 -30.764 -36.440 23.036 1.00 89.78 O
ATOM 4 OP2 C B 4 -29.065 -35.156 21.616 1.00 89.60 O
ATOM 5 O5' C B 4 -30.042 -37.318 20.811 1.00 89.40 O
ATOM 6 C5' C B 4 -31.126 -38.207 20.543 1.00 88.54 C
ATOM 7 C4' C B 4 -30.797 -39.138 19.393 1.00 87.46 C
ATOM 8 O4' C B 4 -30.666 -38.374 18.170 1.00 87.84 O
ATOM 9 C3' C B 4 -29.458 -39.844 19.518 1.00 86.18 C
ATOM 10 O3' C B 4 -29.550 -40.992 20.329 1.00 84.92 O
ATOM 11 C2' C B 4 -29.136 -40.186 18.069 1.00 86.45 C
ATOM 12 O2' C B 4 -29.782 -41.366 17.629 1.00 86.88 O
ATOM 13 C1' C B 4 -29.658 -38.942 17.350 1.00 87.25 C
ATOM 14 N1 C B 4 -28.569 -37.940 17.101 1.00 86.93 N
ATOM 15 C2 C B 4 -27.710 -38.102 16.001 1.00 86.76 C
ATOM 16 O2 C B 4 -27.865 -39.062 15.238 1.00 87.01 O
ATOM 17 N3 C B 4 -26.723 -37.190 15.791 1.00 86.61 N
ATOM 18 C4 C B 4 -26.576 -36.155 16.623 1.00 86.70 C
ATOM 19 N4 C B 4 -25.590 -35.286 16.383 1.00 86.15 N
ATOM 20 C5 C B 4 -27.435 -35.974 17.750 1.00 87.27 C
ATOM 21 C6 C B 4 -28.404 -36.878 17.946 1.00 86.97 C
ATOM 22 P U B 5 -28.278 -41.365 21.214 1.00 83.79 P
ATOM 23 OP1 U B 5 -28.631 -42.505 22.085 1.00 84.08 O
ATOM 24 OP2 U B 5 -27.754 -40.113 21.801 1.00 84.30 O
ATOM 25 O5' U B 5 -27.211 -41.865 20.143 1.00 83.67 O
TER
ATOM 2 P G A 82 -18.123 -37.389 8.009 1.00 84.21 P
ATOM 3 OP1 G A 82 -17.539 -37.565 6.661 1.00 84.84 O
ATOM 4 OP2 G A 82 -18.362 -36.018 8.507 1.00 84.99 O
ATOM 5 O5' G A 82 -19.497 -38.204 8.092 1.00 84.72 O
ATOM 6 C5' G A 82 -19.542 -39.537 7.595 1.00 84.56 C
ATOM 7 C4' G A 82 -20.660 -40.343 8.223 1.00 84.99 C
ATOM 8 O4' G A 82 -20.505 -40.373 9.665 1.00 84.77 O
ATOM 9 C3' G A 82 -22.064 -39.793 8.036 1.00 86.17 C
ATOM 10 O3' G A 82 -22.586 -40.067 6.758 1.00 86.61 O
ATOM 11 C2' G A 82 -22.808 -40.539 9.133 1.00 86.00 C
ATOM 12 O2' G A 82 -23.064 -41.893 8.817 1.00 85.76 O
ATOM 13 C1' G A 82 -21.792 -40.417 10.266 1.00 85.29 C
ATOM 14 N9 G A 82 -22.030 -39.218 11.076 1.00 85.78 N
ATOM 15 C8 G A 82 -21.327 -38.034 11.071 1.00 86.11 C
ATOM 16 N7 G A 82 -21.790 -37.143 11.905 1.00 86.64 N
ATOM 17 C5 G A 82 -22.876 -37.776 12.503 1.00 86.64 C
ATOM 18 C6 G A 82 -23.782 -37.317 13.495 1.00 86.65 C
ATOM 19 O6 G A 82 -23.797 -36.216 14.058 1.00 87.10 O
ATOM 20 N1 G A 82 -24.746 -38.273 13.822 1.00 86.26 N
ATOM 21 C2 G A 82 -24.824 -39.526 13.259 1.00 85.76 C
ATOM 22 N2 G A 82 -25.807 -40.327 13.683 1.00 85.39 N
ATOM 23 N3 G A 82 -23.984 -39.969 12.335 1.00 85.94 N
ATOM 24 C4 G A 82 -23.038 -39.050 12.002 1.00 86.19 C
ATOM 25 P A A 83 -23.455 -38.905 6.084 1.00 89.19 P
ATOM 26 OP1 A A 83 -23.595 -39.208 4.644 1.00 90.21 O
ATOM 27 OP2 A A 83 -22.913 -37.593 6.503 1.00 89.40 O
ATOM 28 O5' A A 83 -24.880 -39.077 6.782 1.00 89.99 O
TER
ATOM 1 O3' U B 3 -31.458 -35.292 20.916 1.00 91.65 O
ATOM 2 P C B 4 -30.271 -36.014 21.706 1.00 90.12 P
ATOM 3 OP1 C B 4 -30.764 -36.440 23.036 1.00 89.78 O
ATOM 4 OP2 C B 4 -29.065 -35.156 21.616 1.00 89.60 O
ATOM 5 O5' C B 4 -30.042 -37.318 20.811 1.00 89.40 O
ATOM 6 C5' C B 4 -31.126 -38.207 20.543 1.00 88.54 C
ATOM 7 C4' C B 4 -30.797 -39.138 19.393 1.00 87.46 C
ATOM 8 O4' C B 4 -30.666 -38.374 18.170 1.00 87.84 O
ATOM 9 C3' C B 4 -29.458 -39.844 19.518 1.00 86.18 C
ATOM 10 O3' C B 4 -29.550 -40.992 20.329 1.00 84.92 O
ATOM 11 C2' C B 4 -29.136 -40.186 18.069 1.00 86.45 C
ATOM 12 O2' C B 4 -29.782 -41.366 17.629 1.00 86.88 O
ATOM 13 C1' C B 4 -29.658 -38.942 17.350 1.00 87.25 C
ATOM 14 N1 C B 4 -28.569 -37.940 17.101 1.00 86.93 N
ATOM 15 C2 C B 4 -27.710 -38.102 16.001 1.00 86.76 C
ATOM 16 O2 C B 4 -27.865 -39.062 15.238 1.00 87.01 O
ATOM 17 N3 C B 4 -26.723 -37.190 15.791 1.00 86.61 N
ATOM 18 C4 C B 4 -26.576 -36.155 16.623 1.00 86.70 C
ATOM 19 N4 C B 4 -25.590 -35.286 16.383 1.00 86.15 N
ATOM 20 C5 C B 4 -27.435 -35.974 17.750 1.00 87.27 C
ATOM 21 C6 C B 4 -28.404 -36.878 17.946 1.00 86.97 C
ATOM 22 P U B 5 -28.278 -41.365 21.214 1.00 83.79 P
ATOM 23 OP1 U B 5 -28.631 -42.505 22.085 1.00 84.08 O
ATOM 24 OP2 U B 5 -27.754 -40.113 21.801 1.00 84.30 O
ATOM 25 O5' U B 5 -27.211 -41.865 20.143 1.00 83.67 O
TER
Atoms:
OP1: (-17.539,-37.565,6.661)
OP2: (-18.362,-36.018,8.507)
C3': (-22.064,-39.793,8.036)
C1': (-21.792,-40.417,10.266)
C5': (-19.542,-39.537,7.595)
O6: (-23.797,-36.216,14.058)
O4': (-20.505,-40.373,9.665)
C8: (-21.327,-38.034,11.071)
C2: (-24.824,-39.526,13.259)
C6: (-23.782,-37.317,13.495)
C5: (-22.876,-37.776,12.503)
C4: (-23.038,-39.050,12.002)
P: (-18.123,-37.389,8.009)
C4': (-20.660,-40.343,8.223)
C2': (-22.808,-40.539,9.133)
O2': (-23.064,-41.893,8.817)
N1: (-24.746,-38.273,13.822)
N2: (-25.807,-40.327,13.683)
N3: (-23.984,-39.969,12.335)
N7: (-21.790,-37.143,11.905)
N9: (-22.030,-39.218,11.076)
O5': (-19.497,-38.204,8.092)
O3': (-22.586,-40.067,6.758)
OP2: (-18.362,-36.018,8.507)
C3': (-22.064,-39.793,8.036)
C1': (-21.792,-40.417,10.266)
C5': (-19.542,-39.537,7.595)
O6: (-23.797,-36.216,14.058)
O4': (-20.505,-40.373,9.665)
C8: (-21.327,-38.034,11.071)
C2: (-24.824,-39.526,13.259)
C6: (-23.782,-37.317,13.495)
C5: (-22.876,-37.776,12.503)
C4: (-23.038,-39.050,12.002)
P: (-18.123,-37.389,8.009)
C4': (-20.660,-40.343,8.223)
C2': (-22.808,-40.539,9.133)
O2': (-23.064,-41.893,8.817)
N1: (-24.746,-38.273,13.822)
N2: (-25.807,-40.327,13.683)
N3: (-23.984,-39.969,12.335)
N7: (-21.790,-37.143,11.905)
N9: (-22.030,-39.218,11.076)
O5': (-19.497,-38.204,8.092)
O3': (-22.586,-40.067,6.758)
C2: (-27.710,-38.102,16.001)
OP1: (-30.764,-36.440,23.036)
OP2: (-29.065,-35.156,21.616)
C4: (-26.576,-36.155,16.623)
O5': (-30.042,-37.318,20.811)
C3': (-29.458,-39.844,19.518)
C1': (-29.658,-38.942,17.350)
O4': (-30.666,-38.374,18.170)
C5': (-31.126,-38.207,20.543)
P: (-30.271,-36.014,21.706)
O2: (-27.865,-39.062,15.238)
C4': (-30.797,-39.138,19.393)
C2': (-29.136,-40.186,18.069)
O2': (-29.782,-41.366,17.629)
N1: (-28.569,-37.940,17.101)
N3: (-26.723,-37.190,15.791)
N4: (-25.590,-35.286,16.383)
C6: (-28.404,-36.878,17.946)
C5: (-27.435,-35.974,17.750)
O3': (-29.550,-40.992,20.329)
OP1: (-30.764,-36.440,23.036)
OP2: (-29.065,-35.156,21.616)
C4: (-26.576,-36.155,16.623)
O5': (-30.042,-37.318,20.811)
C3': (-29.458,-39.844,19.518)
C1': (-29.658,-38.942,17.350)
O4': (-30.666,-38.374,18.170)
C5': (-31.126,-38.207,20.543)
P: (-30.271,-36.014,21.706)
O2: (-27.865,-39.062,15.238)
C4': (-30.797,-39.138,19.393)
C2': (-29.136,-40.186,18.069)
O2': (-29.782,-41.366,17.629)
N1: (-28.569,-37.940,17.101)
N3: (-26.723,-37.190,15.791)
N4: (-25.590,-35.286,16.383)
C6: (-28.404,-36.878,17.946)
C5: (-27.435,-35.974,17.750)
O3': (-29.550,-40.992,20.329)
Image (generated by PyMOL):