Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2540:A2539
Extra
PDB:
ATOM 1 O3' A A2539 -43.716 88.678 158.967 1.00 4.90 O
ATOM 2 P U A2540 -43.003 90.009 158.494 1.00 0.05 P
ATOM 3 OP1 U A2540 -42.323 90.582 159.685 1.00 0.05 O
ATOM 4 OP2 U A2540 -44.029 90.817 157.783 1.00 0.05 O
ATOM 5 O5' U A2540 -41.920 89.452 157.463 1.00 0.05 O
ATOM 6 C5' U A2540 -40.985 88.448 157.871 1.00 0.05 C
ATOM 7 C4' U A2540 -40.406 87.692 156.696 1.00 0.05 C
ATOM 8 O4' U A2540 -41.453 86.977 156.010 1.00 0.05 O
ATOM 9 C3' U A2540 -39.773 88.539 155.616 1.00 0.05 C
ATOM 10 O3' U A2540 -38.461 88.905 155.928 1.00 0.05 O
ATOM 11 C2' U A2540 -39.873 87.667 154.373 1.00 0.05 C
ATOM 12 O2' U A2540 -38.802 86.724 154.329 1.00 0.05 O
ATOM 13 C1' U A2540 -41.177 86.919 154.625 1.00 0.05 C
ATOM 14 N1 U A2540 -42.316 87.495 153.907 1.00 0.01 N
ATOM 15 C2 U A2540 -42.408 87.344 152.567 1.00 0.01 C
ATOM 16 O2 U A2540 -41.516 86.794 151.960 1.00 0.01 O
ATOM 17 N3 U A2540 -43.540 87.881 151.991 1.00 0.01 N
ATOM 18 C4 U A2540 -44.575 88.523 152.640 1.00 0.01 C
ATOM 19 O4 U A2540 -45.554 88.981 152.049 1.00 0.01 O
ATOM 20 C5 U A2540 -44.388 88.606 154.040 1.00 0.01 C
ATOM 21 C6 U A2540 -43.303 88.098 154.609 1.00 0.01 C
ATOM 22 P G A2541 -37.814 90.136 155.170 1.00 0.01 P
ATOM 23 OP1 G A2541 -36.510 90.359 155.770 1.00 0.01 O
ATOM 24 OP2 G A2541 -38.806 91.222 155.197 1.00 0.01 O
ATOM 25 O5' G A2541 -37.645 89.602 153.683 1.00 0.01 O
TER
ATOM 1 O3' U B2538 -49.400 87.323 162.011 1.00 0.11 O
ATOM 2 P A B2539 -48.576 88.652 161.579 1.00 4.90 P
ATOM 3 OP1 A B2539 -47.462 88.823 162.545 1.00 4.90 O
ATOM 4 OP2 A B2539 -49.551 89.771 161.416 1.00 4.90 O
ATOM 5 O5' A B2539 -48.007 88.247 160.179 1.00 4.90 O
ATOM 6 C5' A B2539 -46.806 88.791 159.737 1.00 4.90 C
ATOM 7 C4' A B2539 -45.913 87.731 159.214 1.00 4.90 C
ATOM 8 O4' A B2539 -46.686 86.793 158.439 1.00 4.90 O
ATOM 9 C3' A B2539 -44.847 88.218 158.270 1.00 4.90 C
ATOM 10 O3' A B2539 -43.716 88.678 158.967 1.00 4.90 O
ATOM 11 C2' A B2539 -44.584 87.009 157.373 1.00 4.90 C
ATOM 12 O2' A B2539 -43.704 86.079 158.008 1.00 4.90 O
ATOM 13 C1' A B2539 -45.965 86.383 157.302 1.00 4.90 C
ATOM 14 N9 A B2539 -46.736 86.770 156.113 1.00 4.82 N
ATOM 15 C8 A B2539 -47.821 87.595 156.152 1.00 4.82 C
ATOM 16 N7 A B2539 -48.424 87.727 155.000 1.00 4.82 N
ATOM 17 C5 A B2539 -47.704 86.909 154.157 1.00 4.82 C
ATOM 18 C6 A B2539 -47.873 86.619 152.801 1.00 4.82 C
ATOM 19 N6 A B2539 -48.845 87.127 152.027 1.00 4.82 N
ATOM 20 N1 A B2539 -46.981 85.755 152.273 1.00 4.82 N
ATOM 21 C2 A B2539 -46.019 85.221 153.042 1.00 4.82 C
ATOM 22 N3 A B2539 -45.777 85.416 154.327 1.00 4.82 N
ATOM 23 C4 A B2539 -46.670 86.286 154.831 1.00 4.82 C
ATOM 24 P U B2540 -43.003 90.009 158.494 1.00 0.05 P
ATOM 25 OP1 U B2540 -42.323 90.582 159.685 1.00 0.05 O
ATOM 26 OP2 U B2540 -44.029 90.817 157.783 1.00 0.05 O
ATOM 27 O5' U B2540 -41.920 89.452 157.463 1.00 0.05 O
TER
ATOM 2 P U A2540 -43.003 90.009 158.494 1.00 0.05 P
ATOM 3 OP1 U A2540 -42.323 90.582 159.685 1.00 0.05 O
ATOM 4 OP2 U A2540 -44.029 90.817 157.783 1.00 0.05 O
ATOM 5 O5' U A2540 -41.920 89.452 157.463 1.00 0.05 O
ATOM 6 C5' U A2540 -40.985 88.448 157.871 1.00 0.05 C
ATOM 7 C4' U A2540 -40.406 87.692 156.696 1.00 0.05 C
ATOM 8 O4' U A2540 -41.453 86.977 156.010 1.00 0.05 O
ATOM 9 C3' U A2540 -39.773 88.539 155.616 1.00 0.05 C
ATOM 10 O3' U A2540 -38.461 88.905 155.928 1.00 0.05 O
ATOM 11 C2' U A2540 -39.873 87.667 154.373 1.00 0.05 C
ATOM 12 O2' U A2540 -38.802 86.724 154.329 1.00 0.05 O
ATOM 13 C1' U A2540 -41.177 86.919 154.625 1.00 0.05 C
ATOM 14 N1 U A2540 -42.316 87.495 153.907 1.00 0.01 N
ATOM 15 C2 U A2540 -42.408 87.344 152.567 1.00 0.01 C
ATOM 16 O2 U A2540 -41.516 86.794 151.960 1.00 0.01 O
ATOM 17 N3 U A2540 -43.540 87.881 151.991 1.00 0.01 N
ATOM 18 C4 U A2540 -44.575 88.523 152.640 1.00 0.01 C
ATOM 19 O4 U A2540 -45.554 88.981 152.049 1.00 0.01 O
ATOM 20 C5 U A2540 -44.388 88.606 154.040 1.00 0.01 C
ATOM 21 C6 U A2540 -43.303 88.098 154.609 1.00 0.01 C
ATOM 22 P G A2541 -37.814 90.136 155.170 1.00 0.01 P
ATOM 23 OP1 G A2541 -36.510 90.359 155.770 1.00 0.01 O
ATOM 24 OP2 G A2541 -38.806 91.222 155.197 1.00 0.01 O
ATOM 25 O5' G A2541 -37.645 89.602 153.683 1.00 0.01 O
TER
ATOM 1 O3' U B2538 -49.400 87.323 162.011 1.00 0.11 O
ATOM 2 P A B2539 -48.576 88.652 161.579 1.00 4.90 P
ATOM 3 OP1 A B2539 -47.462 88.823 162.545 1.00 4.90 O
ATOM 4 OP2 A B2539 -49.551 89.771 161.416 1.00 4.90 O
ATOM 5 O5' A B2539 -48.007 88.247 160.179 1.00 4.90 O
ATOM 6 C5' A B2539 -46.806 88.791 159.737 1.00 4.90 C
ATOM 7 C4' A B2539 -45.913 87.731 159.214 1.00 4.90 C
ATOM 8 O4' A B2539 -46.686 86.793 158.439 1.00 4.90 O
ATOM 9 C3' A B2539 -44.847 88.218 158.270 1.00 4.90 C
ATOM 10 O3' A B2539 -43.716 88.678 158.967 1.00 4.90 O
ATOM 11 C2' A B2539 -44.584 87.009 157.373 1.00 4.90 C
ATOM 12 O2' A B2539 -43.704 86.079 158.008 1.00 4.90 O
ATOM 13 C1' A B2539 -45.965 86.383 157.302 1.00 4.90 C
ATOM 14 N9 A B2539 -46.736 86.770 156.113 1.00 4.82 N
ATOM 15 C8 A B2539 -47.821 87.595 156.152 1.00 4.82 C
ATOM 16 N7 A B2539 -48.424 87.727 155.000 1.00 4.82 N
ATOM 17 C5 A B2539 -47.704 86.909 154.157 1.00 4.82 C
ATOM 18 C6 A B2539 -47.873 86.619 152.801 1.00 4.82 C
ATOM 19 N6 A B2539 -48.845 87.127 152.027 1.00 4.82 N
ATOM 20 N1 A B2539 -46.981 85.755 152.273 1.00 4.82 N
ATOM 21 C2 A B2539 -46.019 85.221 153.042 1.00 4.82 C
ATOM 22 N3 A B2539 -45.777 85.416 154.327 1.00 4.82 N
ATOM 23 C4 A B2539 -46.670 86.286 154.831 1.00 4.82 C
ATOM 24 P U B2540 -43.003 90.009 158.494 1.00 0.05 P
ATOM 25 OP1 U B2540 -42.323 90.582 159.685 1.00 0.05 O
ATOM 26 OP2 U B2540 -44.029 90.817 157.783 1.00 0.05 O
ATOM 27 O5' U B2540 -41.920 89.452 157.463 1.00 0.05 O
TER
Atoms:
C4: (-44.575,88.523,152.640)
N3: (-43.540,87.881,151.991)
OP1: (-42.323,90.582,159.685)
OP2: (-44.029,90.817,157.783)
C2: (-42.408,87.344,152.567)
C1': (-41.177,86.919,154.625)
C3': (-39.773,88.539,155.616)
O5': (-41.920,89.452,157.463)
O4': (-41.453,86.977,156.010)
C5': (-40.985,88.448,157.871)
P: (-43.003,90.009,158.494)
C4': (-40.406,87.692,156.696)
C2': (-39.873,87.667,154.373)
O2': (-38.802,86.724,154.329)
N1: (-42.316,87.495,153.907)
O4: (-45.554,88.981,152.049)
O2: (-41.516,86.794,151.960)
C6: (-43.303,88.098,154.609)
C5: (-44.388,88.606,154.040)
O3': (-38.461,88.905,155.928)
N3: (-43.540,87.881,151.991)
OP1: (-42.323,90.582,159.685)
OP2: (-44.029,90.817,157.783)
C2: (-42.408,87.344,152.567)
C1': (-41.177,86.919,154.625)
C3': (-39.773,88.539,155.616)
O5': (-41.920,89.452,157.463)
O4': (-41.453,86.977,156.010)
C5': (-40.985,88.448,157.871)
P: (-43.003,90.009,158.494)
C4': (-40.406,87.692,156.696)
C2': (-39.873,87.667,154.373)
O2': (-38.802,86.724,154.329)
N1: (-42.316,87.495,153.907)
O4: (-45.554,88.981,152.049)
O2: (-41.516,86.794,151.960)
C6: (-43.303,88.098,154.609)
C5: (-44.388,88.606,154.040)
O3': (-38.461,88.905,155.928)
OP1: (-47.462,88.823,162.545)
OP2: (-49.551,89.771,161.416)
C3': (-44.847,88.218,158.270)
C1': (-45.965,86.383,157.302)
C5': (-46.806,88.791,159.737)
O4': (-46.686,86.793,158.439)
C8: (-47.821,87.595,156.152)
O2': (-43.704,86.079,158.008)
C6: (-47.873,86.619,152.801)
C5: (-47.704,86.909,154.157)
C4: (-46.670,86.286,154.831)
P: (-48.576,88.652,161.579)
C4': (-45.913,87.731,159.214)
C2': (-44.584,87.009,157.373)
C2: (-46.019,85.221,153.042)
N1: (-46.981,85.755,152.273)
N3: (-45.777,85.416,154.327)
N6: (-48.845,87.127,152.027)
N7: (-48.424,87.727,155.000)
N9: (-46.736,86.770,156.113)
O5': (-48.007,88.247,160.179)
O3': (-43.716,88.678,158.967)
OP2: (-49.551,89.771,161.416)
C3': (-44.847,88.218,158.270)
C1': (-45.965,86.383,157.302)
C5': (-46.806,88.791,159.737)
O4': (-46.686,86.793,158.439)
C8: (-47.821,87.595,156.152)
O2': (-43.704,86.079,158.008)
C6: (-47.873,86.619,152.801)
C5: (-47.704,86.909,154.157)
C4: (-46.670,86.286,154.831)
P: (-48.576,88.652,161.579)
C4': (-45.913,87.731,159.214)
C2': (-44.584,87.009,157.373)
C2: (-46.019,85.221,153.042)
N1: (-46.981,85.755,152.273)
N3: (-45.777,85.416,154.327)
N6: (-48.845,87.127,152.027)
N7: (-48.424,87.727,155.000)
N9: (-46.736,86.770,156.113)
O5': (-48.007,88.247,160.179)
O3': (-43.716,88.678,158.967)
Image (generated by PyMOL):