Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A153:A6
Extra
PDB:
ATOM 1 O3' U A 152 -6.491 27.501 2.376 1.00 37.44 O
ATOM 2 P G A 153 -7.119 26.220 1.649 1.00 36.59 P
ATOM 3 OP1 G A 153 -6.580 26.290 0.268 1.00 42.99 O
ATOM 4 OP2 G A 153 -8.568 26.172 1.943 1.00 38.87 O
ATOM 5 O5' G A 153 -6.338 25.085 2.430 1.00 42.65 O
ATOM 6 C5' G A 153 -5.009 25.445 2.789 1.00 43.37 C
ATOM 7 C4' G A 153 -4.425 24.464 3.761 1.00 43.01 C
ATOM 8 O4' G A 153 -4.930 24.710 5.112 1.00 40.71 O
ATOM 9 C3' G A 153 -4.767 23.022 3.397 1.00 42.72 C
ATOM 10 O3' G A 153 -3.623 22.193 3.543 1.00 48.31 O
ATOM 11 C2' G A 153 -5.794 22.646 4.449 1.00 40.81 C
ATOM 12 O2' G A 153 -5.854 21.266 4.738 1.00 48.09 O
ATOM 13 C1' G A 153 -5.265 23.449 5.635 1.00 40.00 C
ATOM 14 N9 G A 153 -6.127 23.392 6.822 1.00 37.09 N
ATOM 15 C8 G A 153 -7.496 23.367 6.928 1.00 35.03 C
ATOM 16 N7 G A 153 -7.899 23.156 8.158 1.00 37.99 N
ATOM 17 C5 G A 153 -6.726 22.983 8.892 1.00 31.31 C
ATOM 18 C6 G A 153 -6.499 22.713 10.269 1.00 32.44 C
ATOM 19 O6 G A 153 -7.337 22.561 11.167 1.00 34.49 O
ATOM 20 N1 G A 153 -5.138 22.625 10.568 1.00 28.23 N
ATOM 21 C2 G A 153 -4.131 22.764 9.646 1.00 30.76 C
ATOM 22 N2 G A 153 -2.871 22.653 10.073 1.00 29.46 N
ATOM 23 N3 G A 153 -4.335 23.007 8.371 1.00 32.63 N
ATOM 24 C4 G A 153 -5.640 23.101 8.071 1.00 32.57 C
ATOM 25 P A A 154 -3.600 20.832 2.702 1.00 54.23 P
ATOM 26 OP1 A A 154 -3.065 21.179 1.356 1.00 50.47 O
ATOM 27 OP2 A A 154 -4.924 20.172 2.814 1.00 50.56 O
ATOM 28 O5' A A 154 -2.522 20.055 3.548 1.00 47.31 O
TER
ATOM 1 O3' U B 5 -1.924 19.049 19.965 1.00 37.06 O
ATOM 2 P C B 6 -2.242 20.623 20.024 1.00 36.06 P
ATOM 3 OP1 C B 6 -1.485 21.035 21.228 1.00 36.34 O
ATOM 4 OP2 C B 6 -3.698 20.914 19.969 1.00 30.38 O
ATOM 5 O5' C B 6 -1.601 21.197 18.678 1.00 31.29 O
ATOM 6 C5' C B 6 -0.229 21.137 18.346 1.00 26.77 C
ATOM 7 C4' C B 6 0.005 21.631 16.940 1.00 25.76 C
ATOM 8 O4' C B 6 -0.628 20.738 15.984 1.00 27.23 O
ATOM 9 C3' C B 6 -0.551 23.009 16.588 1.00 26.59 C
ATOM 10 O3' C B 6 0.272 24.074 17.042 1.00 20.94 O
ATOM 11 C2' C B 6 -0.651 22.944 15.068 1.00 27.11 C
ATOM 12 O2' C B 6 0.599 23.212 14.459 1.00 23.94 O
ATOM 13 C1' C B 6 -1.016 21.473 14.838 1.00 27.97 C
ATOM 14 N1 C B 6 -2.465 21.444 14.645 1.00 24.49 N
ATOM 15 C2 C B 6 -2.932 21.748 13.371 1.00 27.66 C
ATOM 16 O2 C B 6 -2.086 21.988 12.501 1.00 27.69 O
ATOM 17 N3 C B 6 -4.270 21.751 13.132 1.00 26.26 N
ATOM 18 C4 C B 6 -5.118 21.487 14.129 1.00 30.18 C
ATOM 19 N4 C B 6 -6.434 21.510 13.872 1.00 30.07 N
ATOM 20 C5 C B 6 -4.660 21.182 15.447 1.00 26.48 C
ATOM 21 C6 C B 6 -3.337 21.177 15.663 1.00 25.10 C
ATOM 22 P G B 7 -0.340 25.223 17.955 1.00 23.03 P
ATOM 23 OP1 G B 7 0.880 25.979 18.368 1.00 21.35 O
ATOM 24 OP2 G B 7 -1.223 24.615 18.992 1.00 22.70 O
ATOM 25 O5' G B 7 -1.251 26.066 16.953 1.00 23.14 O
TER
ATOM 2 P G A 153 -7.119 26.220 1.649 1.00 36.59 P
ATOM 3 OP1 G A 153 -6.580 26.290 0.268 1.00 42.99 O
ATOM 4 OP2 G A 153 -8.568 26.172 1.943 1.00 38.87 O
ATOM 5 O5' G A 153 -6.338 25.085 2.430 1.00 42.65 O
ATOM 6 C5' G A 153 -5.009 25.445 2.789 1.00 43.37 C
ATOM 7 C4' G A 153 -4.425 24.464 3.761 1.00 43.01 C
ATOM 8 O4' G A 153 -4.930 24.710 5.112 1.00 40.71 O
ATOM 9 C3' G A 153 -4.767 23.022 3.397 1.00 42.72 C
ATOM 10 O3' G A 153 -3.623 22.193 3.543 1.00 48.31 O
ATOM 11 C2' G A 153 -5.794 22.646 4.449 1.00 40.81 C
ATOM 12 O2' G A 153 -5.854 21.266 4.738 1.00 48.09 O
ATOM 13 C1' G A 153 -5.265 23.449 5.635 1.00 40.00 C
ATOM 14 N9 G A 153 -6.127 23.392 6.822 1.00 37.09 N
ATOM 15 C8 G A 153 -7.496 23.367 6.928 1.00 35.03 C
ATOM 16 N7 G A 153 -7.899 23.156 8.158 1.00 37.99 N
ATOM 17 C5 G A 153 -6.726 22.983 8.892 1.00 31.31 C
ATOM 18 C6 G A 153 -6.499 22.713 10.269 1.00 32.44 C
ATOM 19 O6 G A 153 -7.337 22.561 11.167 1.00 34.49 O
ATOM 20 N1 G A 153 -5.138 22.625 10.568 1.00 28.23 N
ATOM 21 C2 G A 153 -4.131 22.764 9.646 1.00 30.76 C
ATOM 22 N2 G A 153 -2.871 22.653 10.073 1.00 29.46 N
ATOM 23 N3 G A 153 -4.335 23.007 8.371 1.00 32.63 N
ATOM 24 C4 G A 153 -5.640 23.101 8.071 1.00 32.57 C
ATOM 25 P A A 154 -3.600 20.832 2.702 1.00 54.23 P
ATOM 26 OP1 A A 154 -3.065 21.179 1.356 1.00 50.47 O
ATOM 27 OP2 A A 154 -4.924 20.172 2.814 1.00 50.56 O
ATOM 28 O5' A A 154 -2.522 20.055 3.548 1.00 47.31 O
TER
ATOM 1 O3' U B 5 -1.924 19.049 19.965 1.00 37.06 O
ATOM 2 P C B 6 -2.242 20.623 20.024 1.00 36.06 P
ATOM 3 OP1 C B 6 -1.485 21.035 21.228 1.00 36.34 O
ATOM 4 OP2 C B 6 -3.698 20.914 19.969 1.00 30.38 O
ATOM 5 O5' C B 6 -1.601 21.197 18.678 1.00 31.29 O
ATOM 6 C5' C B 6 -0.229 21.137 18.346 1.00 26.77 C
ATOM 7 C4' C B 6 0.005 21.631 16.940 1.00 25.76 C
ATOM 8 O4' C B 6 -0.628 20.738 15.984 1.00 27.23 O
ATOM 9 C3' C B 6 -0.551 23.009 16.588 1.00 26.59 C
ATOM 10 O3' C B 6 0.272 24.074 17.042 1.00 20.94 O
ATOM 11 C2' C B 6 -0.651 22.944 15.068 1.00 27.11 C
ATOM 12 O2' C B 6 0.599 23.212 14.459 1.00 23.94 O
ATOM 13 C1' C B 6 -1.016 21.473 14.838 1.00 27.97 C
ATOM 14 N1 C B 6 -2.465 21.444 14.645 1.00 24.49 N
ATOM 15 C2 C B 6 -2.932 21.748 13.371 1.00 27.66 C
ATOM 16 O2 C B 6 -2.086 21.988 12.501 1.00 27.69 O
ATOM 17 N3 C B 6 -4.270 21.751 13.132 1.00 26.26 N
ATOM 18 C4 C B 6 -5.118 21.487 14.129 1.00 30.18 C
ATOM 19 N4 C B 6 -6.434 21.510 13.872 1.00 30.07 N
ATOM 20 C5 C B 6 -4.660 21.182 15.447 1.00 26.48 C
ATOM 21 C6 C B 6 -3.337 21.177 15.663 1.00 25.10 C
ATOM 22 P G B 7 -0.340 25.223 17.955 1.00 23.03 P
ATOM 23 OP1 G B 7 0.880 25.979 18.368 1.00 21.35 O
ATOM 24 OP2 G B 7 -1.223 24.615 18.992 1.00 22.70 O
ATOM 25 O5' G B 7 -1.251 26.066 16.953 1.00 23.14 O
TER
Atoms:
OP1: (-6.580,26.290,0.268)
OP2: (-8.568,26.172,1.943)
C3': (-4.767,23.022,3.397)
C1': (-5.265,23.449,5.635)
C5': (-5.009,25.445,2.789)
O6: (-7.337,22.561,11.167)
O4': (-4.930,24.710,5.112)
C8: (-7.496,23.367,6.928)
C2: (-4.131,22.764,9.646)
C6: (-6.499,22.713,10.269)
C5: (-6.726,22.983,8.892)
C4: (-5.640,23.101,8.071)
P: (-7.119,26.220,1.649)
C4': (-4.425,24.464,3.761)
C2': (-5.794,22.646,4.449)
O2': (-5.854,21.266,4.738)
N1: (-5.138,22.625,10.568)
N2: (-2.871,22.653,10.073)
N3: (-4.335,23.007,8.371)
N7: (-7.899,23.156,8.158)
N9: (-6.127,23.392,6.822)
O5': (-6.338,25.085,2.430)
O3': (-3.623,22.193,3.543)
OP2: (-8.568,26.172,1.943)
C3': (-4.767,23.022,3.397)
C1': (-5.265,23.449,5.635)
C5': (-5.009,25.445,2.789)
O6: (-7.337,22.561,11.167)
O4': (-4.930,24.710,5.112)
C8: (-7.496,23.367,6.928)
C2: (-4.131,22.764,9.646)
C6: (-6.499,22.713,10.269)
C5: (-6.726,22.983,8.892)
C4: (-5.640,23.101,8.071)
P: (-7.119,26.220,1.649)
C4': (-4.425,24.464,3.761)
C2': (-5.794,22.646,4.449)
O2': (-5.854,21.266,4.738)
N1: (-5.138,22.625,10.568)
N2: (-2.871,22.653,10.073)
N3: (-4.335,23.007,8.371)
N7: (-7.899,23.156,8.158)
N9: (-6.127,23.392,6.822)
O5': (-6.338,25.085,2.430)
O3': (-3.623,22.193,3.543)
C2: (-2.932,21.748,13.371)
OP1: (-1.485,21.035,21.228)
OP2: (-3.698,20.914,19.969)
C4: (-5.118,21.487,14.129)
O5': (-1.601,21.197,18.678)
C3': (-0.551,23.009,16.588)
C1': (-1.016,21.473,14.838)
O4': (-0.628,20.738,15.984)
C5': (-0.229,21.137,18.346)
P: (-2.242,20.623,20.024)
O2: (-2.086,21.988,12.501)
C4': (0.005,21.631,16.940)
C2': (-0.651,22.944,15.068)
O2': (0.599,23.212,14.459)
N1: (-2.465,21.444,14.645)
N3: (-4.270,21.751,13.132)
N4: (-6.434,21.510,13.872)
C6: (-3.337,21.177,15.663)
C5: (-4.660,21.182,15.447)
O3': (0.272,24.074,17.042)
OP1: (-1.485,21.035,21.228)
OP2: (-3.698,20.914,19.969)
C4: (-5.118,21.487,14.129)
O5': (-1.601,21.197,18.678)
C3': (-0.551,23.009,16.588)
C1': (-1.016,21.473,14.838)
O4': (-0.628,20.738,15.984)
C5': (-0.229,21.137,18.346)
P: (-2.242,20.623,20.024)
O2: (-2.086,21.988,12.501)
C4': (0.005,21.631,16.940)
C2': (-0.651,22.944,15.068)
O2': (0.599,23.212,14.459)
N1: (-2.465,21.444,14.645)
N3: (-4.270,21.751,13.132)
N4: (-6.434,21.510,13.872)
C6: (-3.337,21.177,15.663)
C5: (-4.660,21.182,15.447)
O3': (0.272,24.074,17.042)
Image (generated by PyMOL):