Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A362:A273
Extra
PDB:
ATOM 1 O3' A A 361 -56.243 -53.309 101.568 1.00 68.20 O
ATOM 2 P G A 362 -57.686 -52.586 101.567 1.00 69.08 P
ATOM 3 OP1 G A 362 -58.663 -53.537 100.956 1.00 69.08 O
ATOM 4 OP2 G A 362 -57.499 -51.240 100.934 1.00 69.08 O
ATOM 5 O5' G A 362 -57.994 -52.418 103.123 1.00 69.08 O
ATOM 6 C5' G A 362 -58.155 -53.549 103.971 1.00 69.08 C
ATOM 7 C4' G A 362 -57.959 -53.175 105.420 1.00 69.08 C
ATOM 8 O4' G A 362 -56.570 -52.820 105.643 1.00 69.08 O
ATOM 9 C3' G A 362 -58.756 -51.963 105.901 1.00 69.08 C
ATOM 10 O3' G A 362 -60.064 -52.304 106.331 1.00 69.08 O
ATOM 11 C2' G A 362 -57.883 -51.375 107.006 1.00 69.08 C
ATOM 12 O2' G A 362 -58.107 -52.035 108.246 1.00 69.08 O
ATOM 13 C1' G A 362 -56.476 -51.710 106.510 1.00 69.08 C
ATOM 14 N9 G A 362 -55.869 -50.602 105.759 1.00 67.64 N
ATOM 15 C8 G A 362 -55.616 -50.644 104.419 1.00 67.64 C
ATOM 16 N7 G A 362 -55.062 -49.557 103.973 1.00 67.64 N
ATOM 17 C5 G A 362 -54.931 -48.752 105.090 1.00 67.64 C
ATOM 18 C6 G A 362 -54.388 -47.448 105.203 1.00 67.64 C
ATOM 19 O6 G A 362 -53.904 -46.730 104.320 1.00 67.64 O
ATOM 20 N1 G A 362 -54.451 -47.003 106.514 1.00 67.64 N
ATOM 21 C2 G A 362 -54.967 -47.722 107.563 1.00 67.64 C
ATOM 22 N2 G A 362 -54.937 -47.109 108.752 1.00 67.64 N
ATOM 23 N3 G A 362 -55.475 -48.939 107.470 1.00 67.64 N
ATOM 24 C4 G A 362 -55.421 -49.390 106.208 1.00 67.64 C
ATOM 25 P C A 363 -61.347 -51.581 105.686 1.00 65.48 P
ATOM 26 OP1 C A 363 -62.336 -52.647 105.363 1.00 65.48 O
ATOM 27 OP2 C A 363 -60.854 -50.705 104.587 1.00 65.48 O
ATOM 28 O5' C A 363 -61.881 -50.686 106.893 1.00 65.48 O
TER
ATOM 1 O3' G B 272 -52.907 -36.814 110.134 1.00 57.30 O
ATOM 2 P C B 273 -51.661 -37.647 110.701 1.00 72.24 P
ATOM 3 OP1 C B 273 -51.199 -36.962 111.927 1.00 72.24 O
ATOM 4 OP2 C B 273 -50.707 -37.826 109.580 1.00 72.24 O
ATOM 5 O5' C B 273 -52.327 -39.036 111.078 1.00 72.24 O
ATOM 6 C5' C B 273 -53.489 -39.075 111.886 1.00 72.24 C
ATOM 7 C4' C B 273 -53.833 -40.480 112.264 1.00 72.24 C
ATOM 8 O4' C B 273 -54.840 -40.997 111.361 1.00 72.24 O
ATOM 9 C3' C B 273 -52.698 -41.484 112.158 1.00 72.24 C
ATOM 10 O3' C B 273 -51.798 -41.429 113.259 1.00 72.24 O
ATOM 11 C2' C B 273 -53.448 -42.807 112.021 1.00 72.24 C
ATOM 12 O2' C B 273 -53.932 -43.270 113.281 1.00 72.24 O
ATOM 13 C1' C B 273 -54.638 -42.383 111.160 1.00 72.24 C
ATOM 14 N1 C B 273 -54.392 -42.616 109.717 1.00 72.51 N
ATOM 15 C2 C B 273 -54.933 -43.759 109.104 1.00 72.51 C
ATOM 16 O2 C B 273 -55.597 -44.543 109.796 1.00 72.51 O
ATOM 17 N3 C B 273 -54.722 -43.984 107.780 1.00 72.51 N
ATOM 18 C4 C B 273 -54.000 -43.112 107.062 1.00 72.51 C
ATOM 19 N4 C B 273 -53.809 -43.358 105.758 1.00 72.51 N
ATOM 20 C5 C B 273 -53.438 -41.939 107.663 1.00 72.51 C
ATOM 21 C6 C B 273 -53.655 -41.728 108.976 1.00 72.51 C
ATOM 22 P C B 274 -50.203 -41.452 113.016 1.00 91.79 P
ATOM 23 OP1 C B 274 -49.582 -40.718 114.143 1.00 91.79 O
ATOM 24 OP2 C B 274 -49.959 -40.967 111.636 1.00 91.79 O
ATOM 25 O5' C B 274 -49.859 -43.005 113.119 1.00 91.79 O
TER
ATOM 2 P G A 362 -57.686 -52.586 101.567 1.00 69.08 P
ATOM 3 OP1 G A 362 -58.663 -53.537 100.956 1.00 69.08 O
ATOM 4 OP2 G A 362 -57.499 -51.240 100.934 1.00 69.08 O
ATOM 5 O5' G A 362 -57.994 -52.418 103.123 1.00 69.08 O
ATOM 6 C5' G A 362 -58.155 -53.549 103.971 1.00 69.08 C
ATOM 7 C4' G A 362 -57.959 -53.175 105.420 1.00 69.08 C
ATOM 8 O4' G A 362 -56.570 -52.820 105.643 1.00 69.08 O
ATOM 9 C3' G A 362 -58.756 -51.963 105.901 1.00 69.08 C
ATOM 10 O3' G A 362 -60.064 -52.304 106.331 1.00 69.08 O
ATOM 11 C2' G A 362 -57.883 -51.375 107.006 1.00 69.08 C
ATOM 12 O2' G A 362 -58.107 -52.035 108.246 1.00 69.08 O
ATOM 13 C1' G A 362 -56.476 -51.710 106.510 1.00 69.08 C
ATOM 14 N9 G A 362 -55.869 -50.602 105.759 1.00 67.64 N
ATOM 15 C8 G A 362 -55.616 -50.644 104.419 1.00 67.64 C
ATOM 16 N7 G A 362 -55.062 -49.557 103.973 1.00 67.64 N
ATOM 17 C5 G A 362 -54.931 -48.752 105.090 1.00 67.64 C
ATOM 18 C6 G A 362 -54.388 -47.448 105.203 1.00 67.64 C
ATOM 19 O6 G A 362 -53.904 -46.730 104.320 1.00 67.64 O
ATOM 20 N1 G A 362 -54.451 -47.003 106.514 1.00 67.64 N
ATOM 21 C2 G A 362 -54.967 -47.722 107.563 1.00 67.64 C
ATOM 22 N2 G A 362 -54.937 -47.109 108.752 1.00 67.64 N
ATOM 23 N3 G A 362 -55.475 -48.939 107.470 1.00 67.64 N
ATOM 24 C4 G A 362 -55.421 -49.390 106.208 1.00 67.64 C
ATOM 25 P C A 363 -61.347 -51.581 105.686 1.00 65.48 P
ATOM 26 OP1 C A 363 -62.336 -52.647 105.363 1.00 65.48 O
ATOM 27 OP2 C A 363 -60.854 -50.705 104.587 1.00 65.48 O
ATOM 28 O5' C A 363 -61.881 -50.686 106.893 1.00 65.48 O
TER
ATOM 1 O3' G B 272 -52.907 -36.814 110.134 1.00 57.30 O
ATOM 2 P C B 273 -51.661 -37.647 110.701 1.00 72.24 P
ATOM 3 OP1 C B 273 -51.199 -36.962 111.927 1.00 72.24 O
ATOM 4 OP2 C B 273 -50.707 -37.826 109.580 1.00 72.24 O
ATOM 5 O5' C B 273 -52.327 -39.036 111.078 1.00 72.24 O
ATOM 6 C5' C B 273 -53.489 -39.075 111.886 1.00 72.24 C
ATOM 7 C4' C B 273 -53.833 -40.480 112.264 1.00 72.24 C
ATOM 8 O4' C B 273 -54.840 -40.997 111.361 1.00 72.24 O
ATOM 9 C3' C B 273 -52.698 -41.484 112.158 1.00 72.24 C
ATOM 10 O3' C B 273 -51.798 -41.429 113.259 1.00 72.24 O
ATOM 11 C2' C B 273 -53.448 -42.807 112.021 1.00 72.24 C
ATOM 12 O2' C B 273 -53.932 -43.270 113.281 1.00 72.24 O
ATOM 13 C1' C B 273 -54.638 -42.383 111.160 1.00 72.24 C
ATOM 14 N1 C B 273 -54.392 -42.616 109.717 1.00 72.51 N
ATOM 15 C2 C B 273 -54.933 -43.759 109.104 1.00 72.51 C
ATOM 16 O2 C B 273 -55.597 -44.543 109.796 1.00 72.51 O
ATOM 17 N3 C B 273 -54.722 -43.984 107.780 1.00 72.51 N
ATOM 18 C4 C B 273 -54.000 -43.112 107.062 1.00 72.51 C
ATOM 19 N4 C B 273 -53.809 -43.358 105.758 1.00 72.51 N
ATOM 20 C5 C B 273 -53.438 -41.939 107.663 1.00 72.51 C
ATOM 21 C6 C B 273 -53.655 -41.728 108.976 1.00 72.51 C
ATOM 22 P C B 274 -50.203 -41.452 113.016 1.00 91.79 P
ATOM 23 OP1 C B 274 -49.582 -40.718 114.143 1.00 91.79 O
ATOM 24 OP2 C B 274 -49.959 -40.967 111.636 1.00 91.79 O
ATOM 25 O5' C B 274 -49.859 -43.005 113.119 1.00 91.79 O
TER
Atoms:
OP1: (-58.663,-53.537,100.956)
OP2: (-57.499,-51.240,100.934)
C3': (-58.756,-51.963,105.901)
C1': (-56.476,-51.710,106.510)
C5': (-58.155,-53.549,103.971)
O6: (-53.904,-46.730,104.320)
O4': (-56.570,-52.820,105.643)
C8: (-55.616,-50.644,104.419)
C2: (-54.967,-47.722,107.563)
C6: (-54.388,-47.448,105.203)
C5: (-54.931,-48.752,105.090)
C4: (-55.421,-49.390,106.208)
P: (-57.686,-52.586,101.567)
C4': (-57.959,-53.175,105.420)
C2': (-57.883,-51.375,107.006)
O2': (-58.107,-52.035,108.246)
N1: (-54.451,-47.003,106.514)
N2: (-54.937,-47.109,108.752)
N3: (-55.475,-48.939,107.470)
N7: (-55.062,-49.557,103.973)
N9: (-55.869,-50.602,105.759)
O5': (-57.994,-52.418,103.123)
O3': (-60.064,-52.304,106.331)
OP2: (-57.499,-51.240,100.934)
C3': (-58.756,-51.963,105.901)
C1': (-56.476,-51.710,106.510)
C5': (-58.155,-53.549,103.971)
O6: (-53.904,-46.730,104.320)
O4': (-56.570,-52.820,105.643)
C8: (-55.616,-50.644,104.419)
C2: (-54.967,-47.722,107.563)
C6: (-54.388,-47.448,105.203)
C5: (-54.931,-48.752,105.090)
C4: (-55.421,-49.390,106.208)
P: (-57.686,-52.586,101.567)
C4': (-57.959,-53.175,105.420)
C2': (-57.883,-51.375,107.006)
O2': (-58.107,-52.035,108.246)
N1: (-54.451,-47.003,106.514)
N2: (-54.937,-47.109,108.752)
N3: (-55.475,-48.939,107.470)
N7: (-55.062,-49.557,103.973)
N9: (-55.869,-50.602,105.759)
O5': (-57.994,-52.418,103.123)
O3': (-60.064,-52.304,106.331)
C2: (-54.933,-43.759,109.104)
OP1: (-51.199,-36.962,111.927)
OP2: (-50.707,-37.826,109.580)
C4: (-54.000,-43.112,107.062)
O5': (-52.327,-39.036,111.078)
C3': (-52.698,-41.484,112.158)
C1': (-54.638,-42.383,111.160)
O4': (-54.840,-40.997,111.361)
C5': (-53.489,-39.075,111.886)
P: (-51.661,-37.647,110.701)
O2: (-55.597,-44.543,109.796)
C4': (-53.833,-40.480,112.264)
C2': (-53.448,-42.807,112.021)
O2': (-53.932,-43.270,113.281)
N1: (-54.392,-42.616,109.717)
N3: (-54.722,-43.984,107.780)
N4: (-53.809,-43.358,105.758)
C6: (-53.655,-41.728,108.976)
C5: (-53.438,-41.939,107.663)
O3': (-51.798,-41.429,113.259)
OP1: (-51.199,-36.962,111.927)
OP2: (-50.707,-37.826,109.580)
C4: (-54.000,-43.112,107.062)
O5': (-52.327,-39.036,111.078)
C3': (-52.698,-41.484,112.158)
C1': (-54.638,-42.383,111.160)
O4': (-54.840,-40.997,111.361)
C5': (-53.489,-39.075,111.886)
P: (-51.661,-37.647,110.701)
O2: (-55.597,-44.543,109.796)
C4': (-53.833,-40.480,112.264)
C2': (-53.448,-42.807,112.021)
O2': (-53.932,-43.270,113.281)
N1: (-54.392,-42.616,109.717)
N3: (-54.722,-43.984,107.780)
N4: (-53.809,-43.358,105.758)
C6: (-53.655,-41.728,108.976)
C5: (-53.438,-41.939,107.663)
O3': (-51.798,-41.429,113.259)
Image (generated by PyMOL):