ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIO:X105:X87

Extra

PDB:
ATOM 1 O3' U A 104 7.262 24.504 20.878 1.00 22.27 O
ATOM 2 P G A 105 8.115 23.241 20.394 1.00 22.06 P
ATOM 3 OP1 G A 105 8.656 22.588 21.605 1.00 23.55 O
ATOM 4 OP2 G A 105 9.052 23.661 19.325 1.00 22.11 O
ATOM 5 O5' G A 105 7.000 22.310 19.733 1.00 21.86 O
ATOM 6 C5' G A 105 5.993 21.676 20.514 1.00 21.20 C
ATOM 7 C4' G A 105 5.002 20.960 19.613 1.00 20.64 C
ATOM 8 O4' G A 105 4.386 21.907 18.700 1.00 20.82 O
ATOM 9 C3' G A 105 5.582 19.910 18.675 1.00 20.29 C
ATOM 10 O3' G A 105 5.816 18.674 19.341 1.00 20.84 O
ATOM 11 C2' G A 105 4.447 19.800 17.664 1.00 20.17 C
ATOM 12 O2' G A 105 3.327 19.109 18.176 1.00 20.85 O
ATOM 13 C1' G A 105 4.114 21.271 17.459 1.00 19.20 C
ATOM 14 N9 G A 105 4.916 21.882 16.395 1.00 18.11 N
ATOM 15 C8 G A 105 6.004 22.718 16.529 1.00 17.19 C
ATOM 16 N7 G A 105 6.520 23.101 15.394 1.00 16.58 N
ATOM 17 C5 G A 105 5.722 22.478 14.443 1.00 16.47 C
ATOM 18 C6 G A 105 5.785 22.517 13.031 1.00 16.13 C
ATOM 19 O6 G A 105 6.591 23.130 12.330 1.00 17.40 O
ATOM 20 N1 G A 105 4.792 21.746 12.428 1.00 16.55 N
ATOM 21 C2 G A 105 3.841 21.021 13.113 1.00 16.90 C
ATOM 22 N2 G A 105 2.959 20.334 12.375 1.00 16.54 N
ATOM 23 N3 G A 105 3.769 20.977 14.440 1.00 17.21 N
ATOM 24 C4 G A 105 4.734 21.724 15.039 1.00 16.99 C
ATOM 25 P C A 106 7.081 17.758 18.978 1.00 20.79 P
ATOM 26 OP1 C A 106 7.145 16.669 19.969 1.00 21.66 O
ATOM 27 OP2 C A 106 8.261 18.626 18.761 1.00 20.79 O
ATOM 28 O5' C A 106 6.673 17.137 17.563 1.00 20.65 O
TER

ATOM 1 O3' G B 86 5.840 22.007 2.047 1.00 17.40 O
ATOM 2 P C B 87 4.671 23.010 2.484 1.00 17.89 P
ATOM 3 OP1 C B 87 3.769 23.164 1.320 1.00 18.71 O
ATOM 4 OP2 C B 87 5.256 24.205 3.124 1.00 17.29 O
ATOM 5 O5' C B 87 3.907 22.176 3.611 1.00 18.69 O
ATOM 6 C5' C B 87 3.198 20.981 3.276 1.00 18.27 C
ATOM 7 C4' C B 87 2.646 20.336 4.532 1.00 17.51 C
ATOM 8 O4' C B 87 3.737 19.941 5.398 1.00 17.58 O
ATOM 9 C3' C B 87 1.866 21.255 5.453 1.00 17.69 C
ATOM 10 O3' C B 87 0.580 21.545 4.937 1.00 17.85 O
ATOM 11 C2' C B 87 1.859 20.417 6.727 1.00 16.98 C
ATOM 12 O2' C B 87 1.036 19.271 6.645 1.00 17.57 O
ATOM 13 C1' C B 87 3.329 20.009 6.757 1.00 15.67 C
ATOM 14 N1 C B 87 4.182 20.980 7.513 1.00 14.25 N
ATOM 15 C2 C B 87 4.195 20.932 8.914 1.00 13.89 C
ATOM 16 O2 C B 87 3.515 20.086 9.508 1.00 15.04 O
ATOM 17 N3 C B 87 4.958 21.823 9.597 1.00 13.07 N
ATOM 18 C4 C B 87 5.685 22.730 8.945 1.00 13.00 C
ATOM 19 N4 C B 87 6.417 23.573 9.679 1.00 13.33 N
ATOM 20 C5 C B 87 5.691 22.806 7.515 1.00 13.28 C
ATOM 21 C6 C B 87 4.932 21.921 6.852 1.00 13.78 C
ATOM 22 P A B 88 -0.100 22.958 5.236 1.00 17.52 P
ATOM 23 OP1 A B 88 -1.397 22.948 4.523 1.00 19.09 O
ATOM 24 OP2 A B 88 0.873 24.043 4.999 1.00 17.40 O
ATOM 25 O5' A B 88 -0.367 22.909 6.809 1.00 18.27 O
TER

Atoms:
OP1: (8.656,22.588,21.605)
OP2: (9.052,23.661,19.325)
C3': (5.582,19.910,18.675)
C1': (4.114,21.271,17.459)
C5': (5.993,21.676,20.514)
O6: (6.591,23.130,12.330)
O4': (4.386,21.907,18.700)
C8: (6.004,22.718,16.529)
C2: (3.841,21.021,13.113)
C6: (5.785,22.517,13.031)
C5: (5.722,22.478,14.443)
C4: (4.734,21.724,15.039)
P: (8.115,23.241,20.394)
C4': (5.002,20.960,19.613)
C2': (4.447,19.800,17.664)
O2': (3.327,19.109,18.176)
N1: (4.792,21.746,12.428)
N2: (2.959,20.334,12.375)
N3: (3.769,20.977,14.440)
N7: (6.520,23.101,15.394)
N9: (4.916,21.882,16.395)
O5': (7.000,22.310,19.733)
O3': (5.816,18.674,19.341)
C2: (4.195,20.932,8.914)
OP1: (3.769,23.164,1.320)
OP2: (5.256,24.205,3.124)
C4: (5.685,22.730,8.945)
O5': (3.907,22.176,3.611)
C3': (1.866,21.255,5.453)
C1': (3.329,20.009,6.757)
O4': (3.737,19.941,5.398)
C5': (3.198,20.981,3.276)
P: (4.671,23.010,2.484)
O2: (3.515,20.086,9.508)
C4': (2.646,20.336,4.532)
C2': (1.859,20.417,6.727)
O2': (1.036,19.271,6.645)
N1: (4.182,20.980,7.513)
N3: (4.958,21.823,9.597)
N4: (6.417,23.573,9.679)
C6: (4.932,21.921,6.852)
C5: (5.691,22.806,7.515)
O3': (0.580,21.545,4.937)
Image (generated by PyMOL):
PyMOL image
show in jmol