ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A76:A67

Extra

PDB:
ATOM 1 O3' U A 75 45.049 -9.985 109.411 1.00167.59 O
ATOM 2 P G A 76 45.552 -9.508 107.956 1.00164.01 P
ATOM 3 OP1 G A 76 45.619 -8.023 107.973 1.00161.02 O
ATOM 4 OP2 G A 76 44.686 -10.183 106.951 1.00160.78 O
ATOM 5 O5' G A 76 47.044 -10.086 107.843 1.00160.08 O
ATOM 6 C5' G A 76 48.112 -9.505 108.609 1.00159.02 C
ATOM 7 C4' G A 76 49.437 -10.222 108.376 1.00158.39 C
ATOM 8 O4' G A 76 49.500 -11.500 109.072 1.00157.79 O
ATOM 9 C3' G A 76 49.861 -10.534 106.951 1.00156.54 C
ATOM 10 O3' G A 76 50.374 -9.375 106.280 1.00153.40 O
ATOM 11 C2' G A 76 50.916 -11.631 107.153 1.00155.48 C
ATOM 12 O2' G A 76 52.216 -11.135 107.412 1.00156.05 O
ATOM 13 C1' G A 76 50.402 -12.366 108.396 1.00154.93 C
ATOM 14 N9 G A 76 49.726 -13.627 108.083 1.00159.15 N
ATOM 15 C8 G A 76 48.375 -13.868 108.122 1.00164.14 C
ATOM 16 N7 G A 76 48.058 -15.084 107.767 1.00165.41 N
ATOM 17 C5 G A 76 49.270 -15.692 107.480 1.00160.44 C
ATOM 18 C6 G A 76 49.552 -17.013 107.040 1.00159.32 C
ATOM 19 O6 G A 76 48.763 -17.936 106.819 1.00159.91 O
ATOM 20 N1 G A 76 50.914 -17.214 106.863 1.00156.49 N
ATOM 21 C2 G A 76 51.884 -16.272 107.082 1.00156.10 C
ATOM 22 N2 G A 76 53.140 -16.668 106.849 1.00154.17 N
ATOM 23 N3 G A 76 51.638 -15.034 107.497 1.00157.92 N
ATOM 24 C4 G A 76 50.316 -14.813 107.673 1.00159.19 C
ATOM 25 P G A 77 50.719 -9.447 104.710 1.00149.84 P
ATOM 26 OP1 G A 77 51.519 -8.261 104.323 1.00148.37 O
ATOM 27 OP2 G A 77 49.443 -9.735 103.997 1.00138.94 O
ATOM 28 O5' G A 77 51.683 -10.718 104.638 1.00151.59 O
TER

ATOM 1 O3' C B 66 52.997 -26.823 103.099 1.00150.64 O
ATOM 2 P C B 67 52.793 -26.996 104.683 1.00146.03 P
ATOM 3 OP1 C B 67 53.455 -28.254 105.102 1.00147.63 O
ATOM 4 OP2 C B 67 51.345 -26.796 104.974 1.00142.44 O
ATOM 5 O5' C B 67 53.594 -25.761 105.289 1.00152.54 O
ATOM 6 C5' C B 67 54.942 -25.512 104.898 1.00154.81 C
ATOM 7 C4' C B 67 55.387 -24.158 105.384 1.00155.33 C
ATOM 8 O4' C B 67 54.736 -23.117 104.605 1.00155.89 O
ATOM 9 C3' C B 67 55.009 -23.839 106.819 1.00159.51 C
ATOM 10 O3' C B 67 55.854 -24.437 107.791 1.00163.73 O
ATOM 11 C2' C B 67 55.009 -22.316 106.822 1.00160.99 C
ATOM 12 O2' C B 67 56.298 -21.745 106.935 1.00163.12 O
ATOM 13 C1' C B 67 54.419 -22.016 105.445 1.00157.10 C
ATOM 14 N1 C B 67 52.950 -21.917 105.553 1.00156.47 N
ATOM 15 C2 C B 67 52.358 -20.663 105.800 1.00158.79 C
ATOM 16 O2 C B 67 53.077 -19.649 105.860 1.00160.36 O
ATOM 17 N3 C B 67 51.017 -20.594 105.969 1.00158.35 N
ATOM 18 C4 C B 67 50.276 -21.703 105.894 1.00156.94 C
ATOM 19 N4 C B 67 48.961 -21.594 106.092 1.00157.18 N
ATOM 20 C5 C B 67 50.848 -22.976 105.618 1.00154.54 C
ATOM 21 C6 C B 67 52.171 -23.037 105.450 1.00153.58 C
ATOM 22 P G B 68 55.239 -24.841 109.224 1.00167.03 P
ATOM 23 OP1 G B 68 56.012 -25.986 109.769 1.00170.15 O
ATOM 24 OP2 G B 68 53.765 -24.968 109.058 1.00160.21 O
ATOM 25 O5' G B 68 55.513 -23.553 110.124 1.00171.17 O
TER

Atoms:
OP1: (45.619,-8.023,107.973)
OP2: (44.686,-10.183,106.951)
C3': (49.861,-10.534,106.951)
C1': (50.402,-12.366,108.396)
C5': (48.112,-9.505,108.609)
O6: (48.763,-17.936,106.819)
O4': (49.500,-11.500,109.072)
C8: (48.375,-13.868,108.122)
C2: (51.884,-16.272,107.082)
C6: (49.552,-17.013,107.040)
C5: (49.270,-15.692,107.480)
C4: (50.316,-14.813,107.673)
P: (45.552,-9.508,107.956)
C4': (49.437,-10.222,108.376)
C2': (50.916,-11.631,107.153)
O2': (52.216,-11.135,107.412)
N1: (50.914,-17.214,106.863)
N2: (53.140,-16.668,106.849)
N3: (51.638,-15.034,107.497)
N7: (48.058,-15.084,107.767)
N9: (49.726,-13.627,108.083)
O5': (47.044,-10.086,107.843)
O3': (50.374,-9.375,106.280)
C2: (52.358,-20.663,105.800)
OP1: (53.455,-28.254,105.102)
OP2: (51.345,-26.796,104.974)
C4: (50.276,-21.703,105.894)
O5': (53.594,-25.761,105.289)
C3': (55.009,-23.839,106.819)
C1': (54.419,-22.016,105.445)
O4': (54.736,-23.117,104.605)
C5': (54.942,-25.512,104.898)
P: (52.793,-26.996,104.683)
O2: (53.077,-19.649,105.860)
C4': (55.387,-24.158,105.384)
C2': (55.009,-22.316,106.822)
O2': (56.298,-21.745,106.935)
N1: (52.950,-21.917,105.553)
N3: (51.017,-20.594,105.969)
N4: (48.961,-21.594,106.092)
C6: (52.171,-23.037,105.450)
C5: (50.848,-22.976,105.618)
O3': (55.854,-24.437,107.791)
Image (generated by PyMOL):
PyMOL image
show in jmol