Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B58:B57
Extra
PDB:
ATOM 1 O3' A A 57 4.352 29.783 -0.871 1.00 34.34 O
ATOM 2 P U A 58 4.810 30.950 -1.869 1.00 36.52 P
ATOM 3 OP1 U A 58 5.320 30.292 -3.090 1.00 30.07 O
ATOM 4 OP2 U A 58 5.664 31.900 -1.122 1.00 36.79 O
ATOM 5 O5' U A 58 3.436 31.687 -2.224 1.00 32.09 O
ATOM 6 C5' U A 58 2.452 31.031 -3.017 1.00 33.94 C
ATOM 7 C4' U A 58 1.110 31.731 -2.901 1.00 29.12 C
ATOM 8 O4' U A 58 0.643 31.662 -1.531 1.00 28.75 O
ATOM 9 C3' U A 58 1.110 33.226 -3.178 1.00 28.03 C
ATOM 10 O3' U A 58 1.126 33.504 -4.570 1.00 30.02 O
ATOM 11 C2' U A 58 -0.234 33.600 -2.566 1.00 30.94 C
ATOM 12 O2' U A 58 -1.320 33.226 -3.388 1.00 30.35 O
ATOM 13 C1' U A 58 -0.232 32.750 -1.297 1.00 30.02 C
ATOM 14 N1 U A 58 0.207 33.524 -0.103 1.00 30.32 N
ATOM 15 C2 U A 58 -0.763 34.098 0.682 1.00 29.10 C
ATOM 16 O2 U A 58 -1.951 33.989 0.440 1.00 30.80 O
ATOM 17 N3 U A 58 -0.296 34.799 1.764 1.00 32.54 N
ATOM 18 C4 U A 58 1.023 34.981 2.129 1.00 31.49 C
ATOM 19 O4 U A 58 1.287 35.641 3.130 1.00 35.38 O
ATOM 20 C5 U A 58 1.981 34.353 1.257 1.00 31.44 C
ATOM 21 C6 U A 58 1.547 33.663 0.194 1.00 31.55 C
ATOM 22 P G A 59 2.050 34.687 -5.129 1.00 32.22 P
ATOM 23 OP1 G A 59 1.973 34.650 -6.604 1.00 35.10 O
ATOM 24 OP2 G A 59 3.371 34.612 -4.463 1.00 29.02 O
ATOM 25 O5' G A 59 1.337 36.011 -4.596 1.00 27.21 O
TER
ATOM 1 O3' A B 56 7.429 29.094 4.379 1.00 38.63 O
ATOM 2 P A B 57 7.632 30.071 3.126 1.00 39.75 P
ATOM 3 OP1 A B 57 8.630 29.447 2.229 1.00 38.76 O
ATOM 4 OP2 A B 57 7.835 31.441 3.641 1.00 38.82 O
ATOM 5 O5' A B 57 6.214 29.991 2.392 1.00 36.66 O
ATOM 6 C5' A B 57 5.828 28.766 1.783 1.00 38.21 C
ATOM 7 C4' A B 57 4.385 28.840 1.330 1.00 38.03 C
ATOM 8 O4' A B 57 3.523 28.943 2.488 1.00 33.55 O
ATOM 9 C3' A B 57 4.051 30.061 0.486 1.00 34.09 C
ATOM 10 O3' A B 57 4.352 29.783 -0.871 1.00 34.34 O
ATOM 11 C2' A B 57 2.549 30.173 0.709 1.00 30.05 C
ATOM 12 O2' A B 57 1.839 29.265 -0.109 1.00 31.34 O
ATOM 13 C1' A B 57 2.409 29.756 2.172 1.00 31.28 C
ATOM 14 N9 A B 57 2.382 30.860 3.124 1.00 31.95 N
ATOM 15 C8 A B 57 3.446 31.397 3.792 1.00 32.91 C
ATOM 16 N7 A B 57 3.121 32.383 4.594 1.00 33.03 N
ATOM 17 C5 A B 57 1.750 32.500 4.443 1.00 31.18 C
ATOM 18 C6 A B 57 0.801 33.363 5.022 1.00 32.69 C
ATOM 19 N6 A B 57 1.114 34.314 5.911 1.00 34.02 N
ATOM 20 N1 A B 57 -0.488 33.210 4.654 1.00 31.67 N
ATOM 21 C2 A B 57 -0.797 32.258 3.766 1.00 30.26 C
ATOM 22 N3 A B 57 0.005 31.391 3.153 1.00 33.31 N
ATOM 23 C4 A B 57 1.278 31.566 3.541 1.00 33.67 C
ATOM 24 P U B 58 4.810 30.950 -1.869 1.00 36.52 P
ATOM 25 OP1 U B 58 5.320 30.292 -3.090 1.00 30.07 O
ATOM 26 OP2 U B 58 5.664 31.900 -1.122 1.00 36.79 O
ATOM 27 O5' U B 58 3.436 31.687 -2.224 1.00 32.09 O
TER
ATOM 2 P U A 58 4.810 30.950 -1.869 1.00 36.52 P
ATOM 3 OP1 U A 58 5.320 30.292 -3.090 1.00 30.07 O
ATOM 4 OP2 U A 58 5.664 31.900 -1.122 1.00 36.79 O
ATOM 5 O5' U A 58 3.436 31.687 -2.224 1.00 32.09 O
ATOM 6 C5' U A 58 2.452 31.031 -3.017 1.00 33.94 C
ATOM 7 C4' U A 58 1.110 31.731 -2.901 1.00 29.12 C
ATOM 8 O4' U A 58 0.643 31.662 -1.531 1.00 28.75 O
ATOM 9 C3' U A 58 1.110 33.226 -3.178 1.00 28.03 C
ATOM 10 O3' U A 58 1.126 33.504 -4.570 1.00 30.02 O
ATOM 11 C2' U A 58 -0.234 33.600 -2.566 1.00 30.94 C
ATOM 12 O2' U A 58 -1.320 33.226 -3.388 1.00 30.35 O
ATOM 13 C1' U A 58 -0.232 32.750 -1.297 1.00 30.02 C
ATOM 14 N1 U A 58 0.207 33.524 -0.103 1.00 30.32 N
ATOM 15 C2 U A 58 -0.763 34.098 0.682 1.00 29.10 C
ATOM 16 O2 U A 58 -1.951 33.989 0.440 1.00 30.80 O
ATOM 17 N3 U A 58 -0.296 34.799 1.764 1.00 32.54 N
ATOM 18 C4 U A 58 1.023 34.981 2.129 1.00 31.49 C
ATOM 19 O4 U A 58 1.287 35.641 3.130 1.00 35.38 O
ATOM 20 C5 U A 58 1.981 34.353 1.257 1.00 31.44 C
ATOM 21 C6 U A 58 1.547 33.663 0.194 1.00 31.55 C
ATOM 22 P G A 59 2.050 34.687 -5.129 1.00 32.22 P
ATOM 23 OP1 G A 59 1.973 34.650 -6.604 1.00 35.10 O
ATOM 24 OP2 G A 59 3.371 34.612 -4.463 1.00 29.02 O
ATOM 25 O5' G A 59 1.337 36.011 -4.596 1.00 27.21 O
TER
ATOM 1 O3' A B 56 7.429 29.094 4.379 1.00 38.63 O
ATOM 2 P A B 57 7.632 30.071 3.126 1.00 39.75 P
ATOM 3 OP1 A B 57 8.630 29.447 2.229 1.00 38.76 O
ATOM 4 OP2 A B 57 7.835 31.441 3.641 1.00 38.82 O
ATOM 5 O5' A B 57 6.214 29.991 2.392 1.00 36.66 O
ATOM 6 C5' A B 57 5.828 28.766 1.783 1.00 38.21 C
ATOM 7 C4' A B 57 4.385 28.840 1.330 1.00 38.03 C
ATOM 8 O4' A B 57 3.523 28.943 2.488 1.00 33.55 O
ATOM 9 C3' A B 57 4.051 30.061 0.486 1.00 34.09 C
ATOM 10 O3' A B 57 4.352 29.783 -0.871 1.00 34.34 O
ATOM 11 C2' A B 57 2.549 30.173 0.709 1.00 30.05 C
ATOM 12 O2' A B 57 1.839 29.265 -0.109 1.00 31.34 O
ATOM 13 C1' A B 57 2.409 29.756 2.172 1.00 31.28 C
ATOM 14 N9 A B 57 2.382 30.860 3.124 1.00 31.95 N
ATOM 15 C8 A B 57 3.446 31.397 3.792 1.00 32.91 C
ATOM 16 N7 A B 57 3.121 32.383 4.594 1.00 33.03 N
ATOM 17 C5 A B 57 1.750 32.500 4.443 1.00 31.18 C
ATOM 18 C6 A B 57 0.801 33.363 5.022 1.00 32.69 C
ATOM 19 N6 A B 57 1.114 34.314 5.911 1.00 34.02 N
ATOM 20 N1 A B 57 -0.488 33.210 4.654 1.00 31.67 N
ATOM 21 C2 A B 57 -0.797 32.258 3.766 1.00 30.26 C
ATOM 22 N3 A B 57 0.005 31.391 3.153 1.00 33.31 N
ATOM 23 C4 A B 57 1.278 31.566 3.541 1.00 33.67 C
ATOM 24 P U B 58 4.810 30.950 -1.869 1.00 36.52 P
ATOM 25 OP1 U B 58 5.320 30.292 -3.090 1.00 30.07 O
ATOM 26 OP2 U B 58 5.664 31.900 -1.122 1.00 36.79 O
ATOM 27 O5' U B 58 3.436 31.687 -2.224 1.00 32.09 O
TER
Atoms:
C4: (1.023,34.981,2.129)
N3: (-0.296,34.799,1.764)
OP1: (5.320,30.292,-3.090)
OP2: (5.664,31.900,-1.122)
C2: (-0.763,34.098,0.682)
C1': (-0.232,32.750,-1.297)
C3': (1.110,33.226,-3.178)
O5': (3.436,31.687,-2.224)
O4': (0.643,31.662,-1.531)
C5': (2.452,31.031,-3.017)
P: (4.810,30.950,-1.869)
C4': (1.110,31.731,-2.901)
C2': (-0.234,33.600,-2.566)
O2': (-1.320,33.226,-3.388)
N1: (0.207,33.524,-0.103)
O4: (1.287,35.641,3.130)
O2: (-1.951,33.989,0.440)
C6: (1.547,33.663,0.194)
C5: (1.981,34.353,1.257)
O3': (1.126,33.504,-4.570)
N3: (-0.296,34.799,1.764)
OP1: (5.320,30.292,-3.090)
OP2: (5.664,31.900,-1.122)
C2: (-0.763,34.098,0.682)
C1': (-0.232,32.750,-1.297)
C3': (1.110,33.226,-3.178)
O5': (3.436,31.687,-2.224)
O4': (0.643,31.662,-1.531)
C5': (2.452,31.031,-3.017)
P: (4.810,30.950,-1.869)
C4': (1.110,31.731,-2.901)
C2': (-0.234,33.600,-2.566)
O2': (-1.320,33.226,-3.388)
N1: (0.207,33.524,-0.103)
O4: (1.287,35.641,3.130)
O2: (-1.951,33.989,0.440)
C6: (1.547,33.663,0.194)
C5: (1.981,34.353,1.257)
O3': (1.126,33.504,-4.570)
OP1: (8.630,29.447,2.229)
OP2: (7.835,31.441,3.641)
C3': (4.051,30.061,0.486)
C1': (2.409,29.756,2.172)
C5': (5.828,28.766,1.783)
O4': (3.523,28.943,2.488)
C8: (3.446,31.397,3.792)
O2': (1.839,29.265,-0.109)
C6: (0.801,33.363,5.022)
C5: (1.750,32.500,4.443)
C4: (1.278,31.566,3.541)
P: (7.632,30.071,3.126)
C4': (4.385,28.840,1.330)
C2': (2.549,30.173,0.709)
C2: (-0.797,32.258,3.766)
N1: (-0.488,33.210,4.654)
N3: (0.005,31.391,3.153)
N6: (1.114,34.314,5.911)
N7: (3.121,32.383,4.594)
N9: (2.382,30.860,3.124)
O5': (6.214,29.991,2.392)
O3': (4.352,29.783,-0.871)
OP2: (7.835,31.441,3.641)
C3': (4.051,30.061,0.486)
C1': (2.409,29.756,2.172)
C5': (5.828,28.766,1.783)
O4': (3.523,28.943,2.488)
C8: (3.446,31.397,3.792)
O2': (1.839,29.265,-0.109)
C6: (0.801,33.363,5.022)
C5: (1.750,32.500,4.443)
C4: (1.278,31.566,3.541)
P: (7.632,30.071,3.126)
C4': (4.385,28.840,1.330)
C2': (2.549,30.173,0.709)
C2: (-0.797,32.258,3.766)
N1: (-0.488,33.210,4.654)
N3: (0.005,31.391,3.153)
N6: (1.114,34.314,5.911)
N7: (3.121,32.383,4.594)
N9: (2.382,30.860,3.124)
O5': (6.214,29.991,2.392)
O3': (4.352,29.783,-0.871)
Image (generated by PyMOL):