ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:02425:02435

Extra

PDB:
ATOM 1 O3' A A2424 78.087 138.291 127.716 1.00 32.47 O
ATOM 2 P G A2425 78.902 138.017 126.372 1.00 35.26 P
ATOM 3 OP1 G A2425 78.910 139.261 125.589 1.00 30.66 O
ATOM 4 OP2 G A2425 78.385 136.778 125.758 1.00 33.88 O
ATOM 5 O5' G A2425 80.375 137.760 126.907 1.00 35.40 O
ATOM 6 C5' G A2425 81.273 136.894 126.225 1.00 33.60 C
ATOM 7 C4' G A2425 82.517 136.705 127.049 1.00 34.86 C
ATOM 8 O4' G A2425 82.211 136.025 128.301 1.00 36.10 O
ATOM 9 C3' G A2425 83.558 135.828 126.393 1.00 35.21 C
ATOM 10 O3' G A2425 84.312 136.589 125.463 1.00 34.85 O
ATOM 11 C2' G A2425 84.363 135.338 127.588 1.00 35.70 C
ATOM 12 O2' G A2425 85.242 136.332 128.084 1.00 36.18 O
ATOM 13 C1' G A2425 83.245 135.094 128.603 1.00 34.76 C
ATOM 14 N9 G A2425 82.684 133.746 128.499 1.00 35.58 N
ATOM 15 C8 G A2425 81.389 133.417 128.175 1.00 32.25 C
ATOM 16 N7 G A2425 81.178 132.130 128.153 1.00 33.38 N
ATOM 17 C5 G A2425 82.405 131.570 128.483 1.00 34.19 C
ATOM 18 C6 G A2425 82.789 130.204 128.619 1.00 35.20 C
ATOM 19 O6 G A2425 82.096 129.190 128.482 1.00 38.69 O
ATOM 20 N1 G A2425 84.129 130.081 128.959 1.00 35.43 N
ATOM 21 C2 G A2425 84.991 131.128 129.157 1.00 35.69 C
ATOM 22 N2 G A2425 86.250 130.796 129.484 1.00 34.91 N
ATOM 23 N3 G A2425 84.647 132.405 129.041 1.00 35.97 N
ATOM 24 C4 G A2425 83.347 132.550 128.701 1.00 34.60 C
ATOM 25 P G A2426 84.965 135.863 124.198 1.00 33.52 P
ATOM 26 OP1 G A2426 85.548 136.937 123.378 1.00 32.03 O
ATOM 27 OP2 G A2426 83.989 134.926 123.599 1.00 34.55 O
ATOM 28 O5' G A2426 86.119 134.978 124.844 1.00 35.66 O
TER

ATOM 1 O3' C B2434 88.031 120.103 129.893 1.00 48.85 O
ATOM 2 P C B2435 87.768 120.711 131.356 1.00 51.30 P
ATOM 3 OP1 C B2435 88.758 120.053 132.254 1.00 52.77 O
ATOM 4 OP2 C B2435 86.321 120.615 131.659 1.00 51.17 O
ATOM 5 O5' C B2435 88.154 122.248 131.207 1.00 47.79 O
ATOM 6 C5' C B2435 89.499 122.621 130.864 1.00 43.84 C
ATOM 7 C4' C B2435 89.596 124.105 130.596 1.00 41.61 C
ATOM 8 O4' C B2435 88.786 124.465 129.446 1.00 40.24 O
ATOM 9 C3' C B2435 89.075 125.058 131.658 1.00 40.18 C
ATOM 10 O3' C B2435 89.956 125.196 132.755 1.00 41.89 O
ATOM 11 C2' C B2435 89.006 126.351 130.869 1.00 37.96 C
ATOM 12 O2' C B2435 90.289 126.886 130.638 1.00 37.16 O
ATOM 13 C1' C B2435 88.452 125.846 129.538 1.00 39.73 C
ATOM 14 N1 C B2435 86.993 126.007 129.510 1.00 36.70 N
ATOM 15 C2 C B2435 86.481 127.274 129.238 1.00 35.88 C
ATOM 16 O2 C B2435 87.271 128.195 128.981 1.00 35.70 O
ATOM 17 N3 C B2435 85.143 127.466 129.257 1.00 35.63 N
ATOM 18 C4 C B2435 84.328 126.443 129.518 1.00 34.88 C
ATOM 19 N4 C B2435 83.021 126.683 129.530 1.00 33.83 N
ATOM 20 C5 C B2435 84.822 125.130 129.779 1.00 33.46 C
ATOM 21 C6 C B2435 86.148 124.958 129.764 1.00 35.66 C
ATOM 22 P U B2436 89.384 125.673 134.177 1.00 41.18 P
ATOM 23 OP1 U B2436 90.502 125.505 135.133 1.00 43.19 O
ATOM 24 OP2 U B2436 88.073 125.012 134.444 1.00 41.25 O
ATOM 25 O5' U B2436 89.099 127.225 133.984 1.00 41.71 O
TER

Atoms:
OP1: (78.910,139.261,125.589)
OP2: (78.385,136.778,125.758)
C3': (83.558,135.828,126.393)
C1': (83.245,135.094,128.603)
C5': (81.273,136.894,126.225)
O6: (82.096,129.190,128.482)
O4': (82.211,136.025,128.301)
C8: (81.389,133.417,128.175)
C2: (84.991,131.128,129.157)
C6: (82.789,130.204,128.619)
C5: (82.405,131.570,128.483)
C4: (83.347,132.550,128.701)
P: (78.902,138.017,126.372)
C4': (82.517,136.705,127.049)
C2': (84.363,135.338,127.588)
O2': (85.242,136.332,128.084)
N1: (84.129,130.081,128.959)
N2: (86.250,130.796,129.484)
N3: (84.647,132.405,129.041)
N7: (81.178,132.130,128.153)
N9: (82.684,133.746,128.499)
O5': (80.375,137.760,126.907)
O3': (84.312,136.589,125.463)
C2: (86.481,127.274,129.238)
OP1: (88.758,120.053,132.254)
OP2: (86.321,120.615,131.659)
C4: (84.328,126.443,129.518)
O5': (88.154,122.248,131.207)
C3': (89.075,125.058,131.658)
C1': (88.452,125.846,129.538)
O4': (88.786,124.465,129.446)
C5': (89.499,122.621,130.864)
P: (87.768,120.711,131.356)
O2: (87.271,128.195,128.981)
C4': (89.596,124.105,130.596)
C2': (89.006,126.351,130.869)
O2': (90.289,126.886,130.638)
N1: (86.993,126.007,129.510)
N3: (85.143,127.466,129.257)
N4: (83.021,126.683,129.530)
C6: (86.148,124.958,129.764)
C5: (84.822,125.130,129.779)
O3': (89.956,125.196,132.755)
Image (generated by PyMOL):
PyMOL image
show in jmol