ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F4H:X40:Y25

Extra

PDB:
ATOM 1 O3' A A 39 20.107 50.592 13.661 1.00 97.63 O
ATOM 2 P G A 40 21.219 50.275 12.572 1.00 99.11 P
ATOM 3 OP1 G A 40 22.036 51.502 12.445 1.00 99.74 O
ATOM 4 OP2 G A 40 20.538 49.683 11.404 1.00 99.59 O
ATOM 5 O5' G A 40 22.134 49.134 13.226 1.00100.15 O
ATOM 6 C5' G A 40 21.549 47.982 13.840 1.00100.34 C
ATOM 7 C4' G A 40 22.314 47.564 15.089 1.00100.09 C
ATOM 8 O4' G A 40 23.642 47.109 14.730 1.00100.29 O
ATOM 9 C3' G A 40 22.511 48.662 16.127 1.00100.37 C
ATOM 10 O3' G A 40 21.462 48.598 17.104 1.00100.39 O
ATOM 11 C2' G A 40 23.875 48.324 16.718 1.00100.48 C
ATOM 12 O2' G A 40 23.789 47.322 17.710 1.00100.90 O
ATOM 13 C1' G A 40 24.626 47.756 15.519 1.00100.78 C
ATOM 14 N9 G A 40 25.365 48.718 14.690 1.00101.11 N
ATOM 15 C8 G A 40 25.163 48.942 13.352 1.00101.96 C
ATOM 16 N7 G A 40 25.958 49.840 12.838 1.00102.38 N
ATOM 17 C5 G A 40 26.746 50.245 13.896 1.00101.44 C
ATOM 18 C6 G A 40 27.782 51.205 13.927 1.00101.72 C
ATOM 19 O6 G A 40 28.210 51.897 12.997 1.00101.87 O
ATOM 20 N1 G A 40 28.337 51.337 15.193 1.00102.30 N
ATOM 21 C2 G A 40 27.935 50.615 16.289 1.00102.67 C
ATOM 22 N2 G A 40 28.589 50.864 17.431 1.00102.47 N
ATOM 23 N3 G A 40 26.963 49.706 16.267 1.00102.70 N
ATOM 24 C4 G A 40 26.406 49.565 15.042 1.00101.58 C
ATOM 25 P U A 41 20.885 49.935 17.775 1.00101.18 P
ATOM 26 OP1 U A 41 19.786 49.569 18.693 1.00100.24 O
ATOM 27 OP2 U A 41 20.656 50.954 16.720 1.00100.42 O
ATOM 28 O5' U A 41 22.143 50.415 18.633 1.00102.13 O
TER

ATOM 1 O3' A B 24 35.777 58.076 17.210 1.00102.99 O
ATOM 2 P C B 25 36.416 56.608 17.249 1.00103.90 P
ATOM 3 OP1 C B 25 37.685 56.671 18.012 1.00103.27 O
ATOM 4 OP2 C B 25 36.404 56.054 15.873 1.00103.69 O
ATOM 5 O5' C B 25 35.326 55.794 18.095 1.00103.46 O
ATOM 6 C5' C B 25 35.135 56.103 19.476 1.00103.17 C
ATOM 7 C4' C B 25 33.896 55.427 20.025 1.00102.06 C
ATOM 8 O4' C B 25 32.754 55.779 19.212 1.00101.98 O
ATOM 9 C3' C B 25 33.932 53.912 19.963 1.00101.50 C
ATOM 10 O3' C B 25 34.627 53.385 21.069 1.00 99.63 O
ATOM 11 C2' C B 25 32.455 53.568 20.020 1.00101.89 C
ATOM 12 O2' C B 25 31.940 53.650 21.330 1.00102.57 O
ATOM 13 C1' C B 25 31.869 54.673 19.151 1.00102.52 C
ATOM 14 N1 C B 25 31.665 54.252 17.729 1.00102.40 N
ATOM 15 C2 C B 25 30.590 53.405 17.413 1.00103.10 C
ATOM 16 O2 C B 25 29.829 53.021 18.312 1.00102.90 O
ATOM 17 N3 C B 25 30.409 53.028 16.122 1.00103.74 N
ATOM 18 C4 C B 25 31.250 53.463 15.179 1.00103.54 C
ATOM 19 N4 C B 25 31.030 53.068 13.924 1.00104.07 N
ATOM 20 C5 C B 25 32.349 54.321 15.477 1.00102.50 C
ATOM 21 C6 C B 25 32.516 54.684 16.752 1.00102.24 C
ATOM 22 P C B 26 35.267 51.929 20.951 1.00 98.33 P
ATOM 23 OP1 C B 26 36.102 51.723 22.160 1.00 98.14 O
ATOM 24 OP2 C B 26 35.855 51.769 19.603 1.00 97.90 O
ATOM 25 O5' C B 26 33.982 50.982 20.978 1.00 97.23 O
TER

Atoms:
OP1: (22.036,51.502,12.445)
OP2: (20.538,49.683,11.404)
C3': (22.511,48.662,16.127)
C1': (24.626,47.756,15.519)
C5': (21.549,47.982,13.840)
O6: (28.210,51.897,12.997)
O4': (23.642,47.109,14.730)
C8: (25.163,48.942,13.352)
C2: (27.935,50.615,16.289)
C6: (27.782,51.205,13.927)
C5: (26.746,50.245,13.896)
C4: (26.406,49.565,15.042)
P: (21.219,50.275,12.572)
C4': (22.314,47.564,15.089)
C2': (23.875,48.324,16.718)
O2': (23.789,47.322,17.710)
N1: (28.337,51.337,15.193)
N2: (28.589,50.864,17.431)
N3: (26.963,49.706,16.267)
N7: (25.958,49.840,12.838)
N9: (25.365,48.718,14.690)
O5': (22.134,49.134,13.226)
O3': (21.462,48.598,17.104)
C2: (30.590,53.405,17.413)
OP1: (37.685,56.671,18.012)
OP2: (36.404,56.054,15.873)
C4: (31.250,53.463,15.179)
O5': (35.326,55.794,18.095)
C3': (33.932,53.912,19.963)
C1': (31.869,54.673,19.151)
O4': (32.754,55.779,19.212)
C5': (35.135,56.103,19.476)
P: (36.416,56.608,17.249)
O2: (29.829,53.021,18.312)
C4': (33.896,55.427,20.025)
C2': (32.455,53.568,20.020)
O2': (31.940,53.650,21.330)
N1: (31.665,54.252,17.729)
N3: (30.409,53.028,16.122)
N4: (31.030,53.068,13.924)
C6: (32.516,54.684,16.752)
C5: (32.349,54.321,15.477)
O3': (34.627,53.385,21.069)
Image (generated by PyMOL):
PyMOL image
show in jmol